A. Banerjee and J. Naskar
FULL PAPERS
Boc-Acp-Tyr-OMe (1): A total of 3.69 g (16 mm) of Boc-Acp-OH was
dissolved in a mixture of 25 mL of dichloromethane (DCM) in an ice
water bath. H-Tyr-OMe was isolated from 7.36 g (32 mm) of the corre-
sponding methyl ester hydrochloride by neutralization, subsequent ex-
traction with ethyl acetate, and concentration (15 mL). This was added to
the reaction mixture, followed immediately by 3.3 g (16 mm) of DCC.
The reaction mixture was allowed to come to RT and was stirred for
48 h. DCM was evaporated, the residue was taken in ethyl acetate
(60 mL), and dicyclohexylurea (DCU) was filtered off. The organic layer
was washed with 2 m HCl (3ꢃ50 mL), brine (2ꢃ50 mL), and 1 n sodium
carbonate (3ꢃ50 mL) and brine (2ꢃ50 mL), dried over anhydrous
sodium sulfate, and evaporated under vacuum to yield as a white solid.
Yield: 4.89 g (12 mm, 75%); 1H NMR (300 MHz, [D]CHCl3): d=6.95 (d,
J=9, 2H; ArH), 6.81 (d, J=9, 2H; ArH), 5.82 (d, J=6, 1H; Tyr
CONH), 4.90–4.83 (m, 1H; Tyr CaH), 4.64 (b, 1H; Acp CONH), 3.77 (s,
3H; COOCH3), 3.24–3.18 (m, 2H; Acp CeH2), 3.02–2.98 (m, 2H; Tyr
CbH2), 2.87–2.79 (m, 2H; Acp CaH2), 2.16–2.05 (m, 2H; Acp CbH2), 1.46
(s, 9H; (CH3)3C), 1.40–1.28 (m, 2H; Acp CdH2), 1.06–1.04 ppm (m, 2H;
Acp CgH2); ESI-MS: 430.92 [M+Na]+, 431.92 [M+H+Na]+; elemental
analysis: calcd (%) for C21H32N2O6 (408): C 61.75, H 7.90, N 6.86; found:
C 50.55, H 7.96, N 6.42.
50 mL). The extracts were pooled, dried over anhydrous sodium sulfate,
and evaporated under vacuum to yield 4. Yield: 2.09 g (4 mm, 66.6%);
1H NMR (300 MHz, [D6]DMSO): d=12.41 (b, 2H; COOH), 8.18 (d, J=
6, 1H; Glu CONH), 7.89 (d, J=9, 1H; Tyr CONH), 7.03 (d, J=9, 2H;
Ar H), 6.71 (b, 1H; Acp CONH), 6.62 (d, J=6, 2H; Ar H), 4.45–4.43
(m, 1H; Glu CaH), 4.22–4.20 (m, 1H; Tyr CaH), 4.06–3.99 (m, 2H; Acp
CeH2), 2.90–2.83 (m, 2H; Tyr CbH2), 2.63–2.55 (m, 2H; Acp CaH2), 2.28–
2.20 (m, 2H; Acp CbH2), 2.00–1.98 (m, 2H; Glu CgH2), 1.85–1.75 (m,
2H; Glu CbH2), 1.36 (s, 9H; (CH3)3C), 1.19–1.15 (m, 2H; Acp CdH2),
1.10–1.08 ppm (m, 2H; Acp CgH2); ESIMS: 545.90 [M+Na]+, 561.86
[M+K]+; elemental analysis: calcd (%) for C25H37N3O9 (523): C 57.35,
H 7.12, N 8.30; found: C 57.34, H 7.01, N 8.28.
H2N-Acp-Tyr-Glu-OH (5): To 2.09 g (4 mm) of Boc-Acp-Tyr-Glu-OH
was added 5 mL of TFA, and the removal of the Boc group was moni-
tored by TLC. After 2 h, TFA was removed under vacuum. The residue
was taken in water (20 mL) and washed with diethyl ether (2ꢃ30 mL).
The pH of the aqueous solution was then adjusted to 8 with liquid NH3.
The aqueous portion was evaporated under vacuum to yield peptide 1 as
a white solid. Yield: 1.26 g (3 mm, 75%); ½aꢁ2D2 =6.82 (c=0.58 in water);
1H NMR (300 MHz, [D6]DMSO): d=8.25 (d, J=6, 1H; Glu CONH),
7.93 (d, J=6, 1H; Tyr CONH), 7.04 (d, J=9, 2H; ArH), 6.63 (d, J=9,
2H; ArH), 4.49–4.44 (m, 1H; Glu CaH), 4.25–4.18 (m, 1H; Tyr CaH),
2.93–2.88 (m, 2H; Acp CeH2), 2.82–2.72 (m, 2H; Tyr Cbh2), 2.64–2.55 (m,
2H; Acp CaH2), 2.31–2.27 (m, 2H; Acp CbH2), 2.05–2.01 (m, 2H; Glu
CgH2), 1.86–1.76 (m, 2H; Glu CbH2), 1.49–1.33 (m, 2H; Acp CdH2), 1.08–
1.04 ppm (m, 2H; Acp CgH2); 13C NMR (75 MHz, [D6]DMSO): d=
173.78 (COOH), 173.12 (COOH), 171.97 (C=O), 171.87 (C=O), 155.72,
130.96, 128.06, 114.81 (aromatic carbon), 53.95 (Glu Ca), 51.20 (Tyr Ca),
36.73 (Acp Ce), 34.93 (Tyr Cb), 30.01 (Acp Ca), 26.76 (Acp Cd), 26.35
(Glu Cg), 25.28 (Glu Cb), 24.63 ppm (Acp Cg); ESIMS: 446.08 [M+Na]+,
468.04 [M+K]+, 424.04 [M+H]+; elemental analysis: calcd (%) for
C20H29N3O7 (423): C 56.73, H 6.90, N 9.92; found: C 56.34, H 6.33, N 9.28.
Boc-Acp-Tyr-OH (2): To 4.48 g (11 mm) of Boc-Acp-Tyr-OMe was added
25 mL of MeOH and 15 mL of 2m NaOH, and the progress of saponifica-
tion was monitored by thin layer chromatography (TLC). The reaction
mixture was stirred. After 10 h, methanol was removed under vacuum
and the residue was taken in 50 mL of water and washed with diethyl
ether (2ꢃ50 mL). Then the pH of the aqueous layer was adjusted to 2
using 1 m HCl, and it was extracted with ethyl acetate (3ꢃ50 mL). The
extracts were pooled, dried over anhydrous sodium sulfate, and evaporat-
ed under vacuum to yield 3.92 g of 2. Yield: 3.92 g (10 mm, 90.6%);
1H NMR (300 MHz, [D6]DMSO): d=12.55 (b, 1H; COOH), 8.01 (d, J=
6, 1H; Tyr CONH), 6.99 (d, J=6, 2H; ArH), 6.75–6.73 (t, J=6, 1H; Acp
CONH), 6.63 (d, J=9, 2H; ArH), 4.34–4.26 (m, 1H; Tyr CaH), 4.06–3.99
(m, 2H; Acp CeH2), 2.87–2.81 (m, 2H; Tyr CbH2), 2.74–2.66 (m, 2H; Acp
CaH2), 2.05–1.99 (m, 2H; Acp CbH2), 1.36 (s, 9H; (CH3)3C), 1.31–1.28
(m, 2H; Acp CdH2), 1.19–1.11 ppm (m, 2H; Acp CgH2); ESI-MS: 417.57
[M+Na]+, 433.55 [M+K]+; elemental analysis: calcd (%) for C20H30N2O6
(394): C 60.90, H 7.61, N 7.10; found: C 61.05, H 7.66, N 7.00.
Experiments
NMR experiments: NMR studies were carried out on a Brꢄker DPX
300 MHz spectrometer at 300 K. Compounds concentrations were in the
range 1–10 mmol in CDCl3 and [D6]DMSO
Mass Spectroscopy: Mass spectra were recorded on a HEWLETT PACK-
ARD series 1100MSD and Micromass Qtof micro YA263 mass spectrom-
eter by positive mode electron spray ionisation.
Boc-Acp-Tyr-Glu-OMe (3): A total of 3.54 g (9 mm) of 2 in 10 mL of
N,N-dimethylformamide was cooled in an ice water bath. H-Glu-OMe
was isolated from 4.2 g (20 mm) of the corresponding methyl ester hydro-
chloride by neutralization, subsequent extraction with ethyl acetate, and
concentration (15 mL). This was added to the reaction mixture, followed
immediately by 2.08 g (11.11 mm) of DCC and 1.37 g (10.11 mm) of
HOBT. The reaction mixture was stirred for 3 days. The residue was
taken in ethyl acetate (60 mL), and DCU was filtered off. The organic
layer was washed with 2 mL HCl (3ꢃ50 mL), brine (3ꢃ50 mL), 1m
sodium carbonate (3ꢃ50 mL), and brine (2ꢃ50 mL), dried over anhy-
drous sodium sulfate, and evaporated under vacuum to yield the peptide
as a white solid. Purification was done by a silica gel column (100–200
mesh) using chloroform/methanol (98:2) as the eluent. Yield: 3.30 g
(7 mm, 77.77%); 1H NMR (300 MHz, [D]CHCl3): d=7.02 (d, J=9, 2H;
ArH), 6.96 (d, J=9, 1H; Glu CONH), 6.80 (d, J=9, 2H; ArH), 5.97 (b,
1H; Acp CONH), 4.07–4.67 (m, 1H; Glu CaH), 4.60–4.53 (m, 1H; Tyr
CaH), 3.75 (s, 3H; COOCH3), 3.67 (s, 3H; Glu side chain COOCH3),
3.16–3.05 (m, 2H; Acp CeH2), 3.03–2.97 (m, 2H; Tyr CbH2), 2.89–2.81 (m,
2H; Acp CaH2), 2.40–2.34 (m, 2H; Glu CgH2), 2.23–2.05 (m, 2H; Glu
CbH2), 2.03–1.96 (m, 2H; Acp CbH2), 1.46 (s, 9H; (CH3)3C), 1.37–1.25
(m, 2H; Acp CdH2), 1.03–0.96 ppm (m, 2H; Acp CgH2); ESIMS:
[M+Na]+ 573.99; elemental analysis: calcd (%) for C27H41N3O9 (551): C,
58.79; H, 7.49; N, 7.62. Found: C, 58.34; H, 7.33; N, 7.28.
Dynamic light Scattering (DLS) experiment: DLS has been done in
Nano ZS MALVERN Instrument UK using solution of different peptide
concentration.
Circular Dichroic (CD) study: CD study has been carried out on a
JASCO J-815-150S instrument at a temperature of 258C.
Polarimeter: Perkin–Elmer instruments. Model 341 LC polarimeter.
Fourier Transform IR (FT-IR) spectroscopy: The FT-IR spectra were
taken using Shimadzu (Japan) model FT-IR spectrophotometer. Peptide
solutions were suspended on a CaF2 plate and dried by vacuum. The pep-
tide deposits were resuspended with D2O and subsequently dried to form
thin films and spectra were collected at 258C.
Transmission electron microscopy (TEM) and field-emission scanning
electron microscopy (FE-SEM): TEM and FE-SEM were carried out to
investigate the morphology of the nanostructures. In general, solutions of
peptide at different concentration were taken and a drop of the solution
was placed on a carbon-coated copper grid (300 mesh) and evaporated.
Again, a drop of uranil acetate solution (freshly prepared 2% uranil ace-
tate solution) was added and dried under vacuum for 10 h. With these
grids, TEM studies were carried out using a JEOL JEM 2010 electron
microscope. During SEM, a solution of the reported peptide was taken
on glass cover slips and evaporated to dryness for 24 h. A gold coating
was applied on the top of the sample to make it conductive for analysis.
It was studied on a JEOL JSM 6007F instrument at 3.0 KV voltage and
20000ꢃ magnification.
Boc-Acp-Tyr-Glu-OH (4): To 2.82 g (6 mm) of Boc-Acp-Tyr-Glu-OMe
were added 25 mL of MeOH and 15 mL of 2m NaOH, and the progress
of saponification was monitored by thin-layer chromatography (TLC).
The reaction mixture was stirred. After 10 h, methanol was removed
under vacuum and the residue was taken in 50 mL of water and washed
with diethyl ether (2ꢃ50 mL). The pH of the aqueous layer was then ad-
justed to 2 using 1m HCl, and it was extracted with ethyl acetate (3ꢃ
Atomic force microscopic (AFM) study: The peptide solution was dried
by slow evaporation on a microscopic cover glass and then atomic force
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ꢂ 2009 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
Chem. Asian J. 2009, 4, 1817 – 1823