DOI: 10.1002/anie.201100996
Protein Chemical Synthesis
Protein Chemical Synthesis by Ligation of Peptide Hydrazides**
Ge-Min Fang, Yi-Ming Li, Fei Shen, Yi-Chao Huang, Jia-Bin Li, Yun Lin, Hong-Kui Cui, and
Lei Liu*
Dedicated to Professor Ronald Breslow on the occasion of his 80th birthday
Protein chemical synthesis can overcome the potential
limitations of protein expression and produce proteins with
predesigned changes and modifications with atomic preci-
sion.[1] Key to the success of modern protein chemical
synthesis is the chemoselective ligation reaction. The most
successful ligation method is the native chemical ligation
developed by Kent et al.[2] It involves a chemoselective
reaction between a C-terminal peptide thioester and an N-
terminal cysteine (Cys).[3] Both synthetic and recombinant
Scheme 1. Ligation of peptide hydrazides.
peptides can be used in native chemical ligation.[2,4] The utility
of native chemical ligation has been demonstrated by the total
and semisynthesis of a variety of proteins, which enables the
broad application of synthetic chemistry to the study of
protein biology.[5] Although native chemical ligation is a
transformative method, its applicability can sometimes be
limited in two respects: 1) peptide thioesters remain challeng-
ing to synthesize with Fmoc chemistry;[6] 2) convergent
synthesis of larger proteins without using protecting groups
requires an “orthogonal” amide-forming ligation chemistry,
that is, one that is compatible with the use of native chemical
ligation.[7]
In the present study we describe the ligation of peptide
hydrazides that is complementary to native chemical ligation
(Scheme 1). This method involves a chemoselective reaction
between a C-terminal peptide hydrazide and a Cys-peptide to
yield a native peptide bond. Notably, peptide hydrazides can
be readily prepared through either Boc- or Fmoc-based solid-
phase peptide synthesis (SPPS).[8] In addition, peptide hydra-
zide can be obtained through biological expression. Thus both
total and semisynthesis of proteins can be achieved with
ligation of peptide hydrazides. More importantly, the ligation
of peptide hydrazides enables sequential ligation in the N-to-
C direction.[9] It should be pointed out that peptide hydrazides
have been used in protein chemistry since the beginning of the
field.[10] However, the previous methods with peptide hydra-
zides are not chemoselective and necessitate protections at
Lys and Cys residues. The new ligation method described here
bypasses the requirement of protection groups, which is a
critical advance.[10]
Our study began with the ligation between model peptides
H-Leu-Tyr-Arg-Ala-Tyr-NHNH2 (1a) and H-Cys-Lys-Tyr-
Met-His-OH (2).[11] The ligation involves two steps that are
carried out in a one-pot fashion. In the first step the two
peptides (1.5 and 2.0 mm in final concentration, respectively)
were added together to the aqueous phosphate (0.2m) buffer
containing 6.0m guanidinium chloride (Gn·HCl). At a low pH
(3.0–7.0) and À108C, the oxidant (10 mm in final concen-
tration) was added to the ligation mixture presumably
producing a peptide azide. After 20 min, a thiol compound
was added (100 mm in final concentration) and the pH value
was adjusted to 7.0 to initiate the second step. The second step
was allowed to proceed for 2 h at RT before the yield was
determined by HPLC. As shown in Table 1, organic oxidants
(entries 1 and 2) do not provide good results, whereas NaNO2
can successfully stimulate the ligation to reach a high yield
(entries 3 and 5). The optimal pH value for the oxidation is
3.0–4.0 and MPAA (4-mercaptophenylacetic acid)[3] is impor-
tant for mediating the ligation.
With the optimized conditions in hand, we investigated
the scope of the ligation for 17 amino acids (Table 2). For
three other amino acids (Xaa = Gln, Asp, and Asn) we have
not been able to prepare the peptide hydrazides because
intramolecular cyclization occurs between the hydrazide and
C-terminal side-chain amide or acid group in SPPS (see the
Supporting Information).[12] In all cases, the first oxidation
step was conducted at pH 3.0 for 20 min, while for most of the
C-terminal amino acids the second step can reach completion
with a high yield (84–99%) in 2 h. Notably, unprotected Ser,
Thr, Tyr, His, Lys, and even Cys are well compatible with the
ligation. We did not observe any oxidized byproducts for Met
and Trp either. For more sterically hindered amino acids (e.g.
[*] G.-M. Fang, Y.-M. Li, F. Shen, Y.-C. Huang, J.-B. Li, Y. Lin, H.-K. Cui,
Prof. Dr. L. Liu
Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical
Biology (Ministry of Education)
Department of Chemistry, Tsinghua University
Beijing 100084 (China)
Fax: (+86)10-6277-1149
E-mail: lliu@mail.tsinghua.edu.cn
[**] This work was supported by NSFC (no. 20802040 and no. 20932006)
and the national “973” grants from the Ministry of Science and
Technology (no. 2011CB965300).
Supporting information for this article is available on the WWW
Angew. Chem. Int. Ed. 2011, 50, 7645 –7649
ꢀ 2011 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
7645