Journal of Medicinal Chemistry
ARTICLE
10% Pd/C (1:1 w/w with protected amine). The solvent was briefly
degassed and hydrogen was added via balloon; the mixture was then
stirred at room temperature for 1 h. The reaction mixture was filtered
through Celite and the pad was washed with MeOH (ꢁ2). The solvent
was evaporated under reduced pressure to afford the deprotected amine,
which was used without further purification.
(()-1-(4-Aminobutylamino)-3-(napthalenyl-1-yloxy)propan-
2-ol (13e). The compound was prepared via method A to yield a
colorless oil (quant.). 1H NMR (CD3OD): 1.63ꢀ1.79 (4H, m),
2.71ꢀ2.84 (2H, m), 2.89 (2H, t), 2.92 (1H, dd, J = 12.3, 8.7), 3.03
(1H, dd, J = 12.3, 3.6), 4.14 (1H, dd, J = 9.8, 5.3), 4.18 (1H, dd, J = 9.8,
5.3), 4.28 (1H, dtd, J = 8.7, 5.3, 3.6), 6.91 (1H, dd, J = 7.6, 0.9),
7.34ꢀ7.50 (4H, m), 7.76ꢀ7.82 (1H, m), 8.26ꢀ8.34 (1H, m). 13C NMR
(CD3OD): 27.5, 27.7, 40.7, 49.7, 52.9, 69.2, 71.8, 106.0, 121.6, 122.9,
126.1, 126.9, 127.0, 127.4, 128.5, 136.0, 155.7. IR (NaCl, film): 3354,
2939, 1579, 1398, 1270, 1241, 1102, 795, 772 cmꢀ1. HRMS (TOF ES+):
calcd for C17H25N2O2 289.1916, found 289.1895 (MH+).
(S)-1-(2-Allylphenoxy)-3-(2-aminoethylamino)propan-2-
ol (22a). (S)-tert-Butyl 2-(3-(2-allylphenoxy)-2-hydroxypropylamino)-
ethylcarbamate (21a) (0.04 g, 0.114 mmol) was dissolved in a 2 M
solution of HCl in dioxane (2 mL) and the reaction mixture was stirred at
room temperature for 18 h. The solvent was evaporated under reduced
pressure and the resultant residue was azeotroped sequentially with toluene
and EtOAc to afford the dihydrochloride salt of the title compound as a
white solid (0.036 g, 98%), which was used without further purification.
Mp: 142ꢀ145 °C. [α]D26 = ꢀ2.2° (c 0.46, 15:85 MeOH/CH2Cl2). 1H
NMR (CD3OD): 3.28 (1H, dd, J = 12.5, 9.8), 3.36ꢀ3.49 (7H, m), 4.01
(1H, dd, J = 10.0, 5.7), 4.09 (1H, dd, J = 10.0, 4.8), 4.32ꢀ4.40 (1H, m),
4.98ꢀ5.06 (2H, m), 5.94ꢀ6.05 (1H, m), 6.91 (1H, td, J = 7.7, 1.0), 6.95
(1H, d, J = 7.7), 7.13 (1H, dd, J = 7.7, 1.7), 7.18 (1H, td, J = 7.7, 1.7). 13C
NMR (CD3OD): 35.3, 36.8, 45.9, 52.0, 66.8, 71.0, 112.7, 115.7, 122.3,
128.5, 129.8, 131.0, 138.5, 157.4. IR (KBr): 3299, 2956, 1600, 1491,
1455, 1258, 1214, 764 cmꢀ1. HRMS (TOF ES+): calcd for C14H23N2O2
251.1760, found 251.1773 (MH+).
(()-13-Amino-1-(1H-indol-4-yl)-1,8,11-trioxa-5-azatridecan-
3-ol (33). The compound was prepared via method A to yield a colorless oil
(88%). 1HNMR(CD3OD): 2.86ꢀ3.02(6H, m), 3.58ꢀ3.69(8H, m), 4.12
(1H, dd, J = 9.9, 6.0), 4.15 (1H, dd, J = 9.9, 4.7), 4.16ꢀ4.24 (1H, m), 6.41
(1H, d, J = 3.0), 6.64 (1H, d, J = 7.6), 6.91 (1H, t, J = 7.8), 7.16 (1H, dd, J =
7.8, 0.7), 7.20 (1H, d, J = 3.3). 13C NMR (CD3OD): 41.1, 49.8, 52.9, 69.6,
69.6, 70.4, 71.3, 71.3, 71.7, 102.7, 103.6, 114.6, 120.4, 125.2, 128.2, 131.1,
146.7. IR (NaCl, film): 2919, 1576, 1253, 1091, 728 cmꢀ1. HRMS (TOF
ES+): calcd for C17H27N3O4 338.2080, found 338.2062 (MH+).
Method B. Coupling of Amines with BODIPY 630/650-X,
SE. BODIPY 630/650-X, SE (1ꢀ2.5 mg, 1 equiv) and amine (2ꢀ4
equiv) were dissolved in anhydrous DMF (1 mL) [in the case of the
alprenolol congener HCl salts, 2 equiv (with respect to the congener) of
N,N-diisoproylethylamine (DIPEA) was also added (method B1)] and
stirred under a nitrogen atmosphere, with the exclusion of light, for 2 h.
The solvent was evaporated under reduced pressure and this crude
mixture was purified by PTLC on silica using (10:90 MeOH/CH2Cl2)
as eluent to give compounds 14aꢀf, 18a,b, 23a,b, 26a,b, 31, and 34 as
blue amorphous solids. When submitted to analytical HPLC [YMC C8,
150 ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100% B or 5ꢀ100% B, 30 min,
monitored using photodiode array detection between 190 and 800 nm;
mobile phases, solvent A, H2O; solvent B, MeCN (both A and B
containing 0.06% TFA as additive)] all fluorescent conjugates were
observed to elute as single and symmetrical peaks at the retention time tR
given below for each compound. For the initial conjugates synthesized
within the racemic propranolol series, we further analyzed compound
purity by performing a second analytical HPLC [Jones C4, 150 ꢁ 4.6
mm, 1 mL minꢀ1, 35ꢀ100% B, 30 min, monitored using photodiode
array detection between 190 and 800 nm; solvent A, H2O; solvent B,
MeCN (both A and B containing 0.06% TFA as additive)]. Again, all
target compounds elutedas homogeneoussingle peaks (with the expected
reduction in retention time). The identities of all the compounds were
further analyzed by HRMS (TOF ES+). The purities of all compounds
tested in biological systems were determined as being ∼95%.
(S)-N-[2-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
ethyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-
4-bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14a). The compound was prepared via method B
(78%). tR 9.61 min (YMC C8, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100% B, 30
min; solvent A, H2O; solvent B, MeCN, both A and B contain 0.06% TFA
as additive). HRMS (TOF ES+): calcd for C44H47BF2N5O5S 806.3359,
found 806.3425 (MH+).
(S)-N-[2-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
butyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-
4-bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14b). The compound was prepared via method B (80%).
tR 15.68 min (YMC C8, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 5ꢀ100% B, 30 min;
solvent A, H2O; solvent B, MeCN, both A and B contain 0.06% TFA as
additive). HRMS (TOF ES+): calcd for C46H51BF2N5O5S 834.3672, found
834.3690 (MH+).
(S)-N-[2-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
octyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-
4-bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14c). The compound was prepared via method B (71%).
tR 10.22 min (YMC C8, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100% B, 30 min;
solvent A, H2O; solvent B, MeCN, both A and B contain 0.06% TFA as
additive). HRMS (TOF ES+): calcd for C50H59BF2N5O5S 890.4298, found
890.4278 (MH+).
(()-N-[2-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
ethyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-4-
bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14d). The compound was prepared via method B (98%).
tR1 10.37 min (YMC C8, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100% B,
30 min). tR2 7.45 min (Jones C4, 150 ꢁ 4.6mm, 1 mLminꢀ1, 35ꢀ100% B,
30 min; solvent A, H2O; solvent B, MeCN, both A and B contain 0.06%
TFA as additive). HRMS (TOF ES+): calcd for C44H47BF2N5O5S
806.3359, found 806.3279 (MH+).
(()-N-[4-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
butyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-4-
bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14e). The compound was prepared via method B (77%).
tR1 9.48 min (YMCC8, 150ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100% B, 30min).
tR2 7.54 min (Jones C4, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 35ꢀ100%B, 30 min).
1H NMR (CD3OD): 1.22ꢀ1.33 (2H, m), 1.47ꢀ1.64 (6H, m), 1.66ꢀ1.76
(2H, m), 2.16 (2H, t, J = 7.3), 3.06 (2H, t, J = 8.0), 3.16ꢀ3.33 (6H, m),
4.13 (1H, dd, J = 9.9, 5.7), 4.20 (1H, dd, J = 9.9, 5.0), 4.34ꢀ4.41 (1H, m),
4.55 (2H, s), 6.83 (1H, d, J = 4.2), 6.90(1H, d, J = 7.1), 7.02 (2H, app d, J =
8.8), 7.11 (1H, d, J = 4.2), 7.11 (1H, d, J = 4.2), 7.18 (1H, d, J = 4.4), 7.19
(1H, dd, J = 5.0, 3.8), 7.33 (1H, s), 7.37 (1H, t, J = 7.9), 7.43ꢀ7.56 (4H,
m), 7.57ꢀ7.63 (3H, m), 7.81 (1H, dd, J = 7.1, 1.5), 8.12 (1H, dd, J = 3.9,
1.0), 8.22 (1H, br t, J = 6.0), 8.24ꢀ8.28 (1H, m). HRMS (TOF ES+):
calcd for C46H51BF2N5O5S 834.3672, found 834.3622 (MH+).
(()-N2-(2-Hydroxy-3-(naphthalen-1-yloxy)propylamino)-
octyl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-2-yl)-
4-bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)acetamido)-
hexanamide (14f). The compound was prepared via method B (69%). tR
14.21 min (YMC C8, 150 ꢁ 4.6 mm, 1 mL minꢀ1, 5ꢀ100% B, 30 min;
solvent A, H2O; solvent B, MeCN, both A and B contain 0.06% TFA as
additive). HRMS (TOF ES+): calcd for C50H59BF2N5O5S 890.4298, found
890.4321 (MH+).
(S)-N-[3-Hydroxy-1-(naphthalen-1-yl)-1,8,11-trioxa-5-aza-
tridecan-13-yl]-6-(2-(2-(4,4-difluoro-4,4a-dihydro-5-(thiophen-
2-yl)-4-bora-3a,4a-diaza-s-indacene-3-yl)vinyl)phenoxy)-
acetamido)hexanamide (18a). The compound was prepared
6884
dx.doi.org/10.1021/jm2008562 |J. Med. Chem. 2011, 54, 6874–6887