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M. Moura et al. / European Journal of Medicinal Chemistry 46 (2011) 5046e5056
150.2 (C-400), 149.1 (C-2), 134.8 (C-6), 112.0 (C-5), 93.4 (C-300), 92.5
(C-30), 86.2 (C-10), 83.8 (C-40), 74.9 (C-20), 62.2 (C-50), 39.3, 33.8 (2x
CH2), 26.0, 25.2 (2x SiC(CH3)3), 19.4 (CH2), 18.4, 17.8 (2x SiC(CH3)3),
12.2 (CH3 base), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.7 (2x Si(CH3)2). HRMS:
C29H50N4O10SSi2Na calcd. 725.2684, found 725.2679.
was purified by HPLC to give 13 (80 mg, 76%) as a white solid.
Rf ¼ 0.73 (CH2Cl2/MeOH : 9.8/0.2); Mp ¼ 171e172 ꢀC; ½a D21
: ꢄ24 (c
ꢅ
0.1, CH2Cl2); 1H NMR (CDCl3; 300 MHz) :
d 7.25 (s, 1H, H-6), 5.95 (d, J
¼ 8.0 Hz, 1H, H-10), 5.66 (s, 1H, H-300), 5.57 (s, 2H, NH2), 4.53 (d,
10,20
1H, H-20), 4.37 (m, 1H, H-40), 4.03 (dd, J5 a,4
¼
2.7 Hz,
0
0
0
J5 a,5 b ¼ 12.5 Hz, 1H, H-50a), 3.92 (dd, J5 b,4 ¼ 2.2 Hz,1H, H-5 b), 2.90
(t, Ja,b ¼ 6.9 Hz, 2H, CH2a), 2.73 (t, Jc,b ¼ 7.3 Hz, 2H, CH2c), 2.33 (s, 3H,
SCH3), 2.13 (m, 2H, CH2b), 2.00 (s, 3H, CH3 base), 1.00 (s, 9H,
SiC(CH3)3), 0.88 (s, 9H, SiC(CH3)3), 0.24 (s, 3H, Si(CH3)2), 0.23 (s, 3H,
Si(CH3)2), 0.09 (s, 3H, Si(CH3)2), ꢄ0.02 (s, 3H, Si(CH3)2); 13C NMR
0
0
0
0
4.3.2.3. [1-[20,50-Bis-O-tert-butyldimethylsilyl-
b-d-ribofuranosyl]-3-
N-(N-methylaminoglutaryl)thymine]- 30-spiro-500-(400-amino-100,200-
oxathiole-200,200-dioxide) (11). According to the general procedure
TSAO-T (64.9 mg, 0.110 mmol), Na2CO3 (93 mg, 0.881 mmol) and
Bu4NBr (3.5 mg, 1.1 10ꢄ2 mmol) in CH2Cl2 (2 mL) and water (4 mL)
(CDCl3; 75 MHz) :
d 198.9 (COSCH3), 174.8 (COCH2), 161.8 (C-4),
were treated with glutaryl dichloride (56.2
m
L, 0.440 mmol) and
150.3 (C-400), 149.0 (C-2), 135.2 (C-6), 112.0 (C-5), 93.5 (C-300), 92.2
(C-30), 87.1 (C-10), 83.8 (C-40), 74.7 (C-20), 62.1 (C-50), 42.0, 39.4
(CH2), 26.0, 25.3 (SiC(CH3)3), 19.4 (CH2), 18.4, 17.9 (SiC(CH3)3), 12.2
(CH3 base), 11.6 (SCH3), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.7 (Si(CH3)2); HRMS :
C30H51N3O10S2Si2Na calcd. 756.2452, found 756.2444.
quenched with MeNH2 (33% EtOH) (108 L, 0.851 mmol). The crude
m
product was purified by flash chromatography (EtOAc/cyclohexane,
7/3) followed by crystallization from water to give 11 (55 mg, 70%)
as
a
white solid. Rf
¼
0.21 (EtOAc/Cyclohexane :5/5);
Mp ¼ 118e120 ꢀC; ½a D21
ꢅ
¼ ꢄ22 (c 0.1, CH2Cl2); 1H NMR (CDCl3;
0
300 MHz) :
d
7.30 (s, 1H, H-6), 6.04 (d, 1H, J 1 ,2 ¼ 8.2 Hz, H-1 ), 5.96
4.3.2.6. [1-[20,50-Bis-O-tert-butyldimethylsilyl-
b-d-ribofuranosyl]-3-
0
0
(s, 1H, NH), 5.82 (s, 2H, NH2), 5.69 (s, 1H, H-300), 4.44 (d, 1H, H-20),
N-(tert-butoxyglutaryl) thymine]-30-spiro-500-(400-amino-100,200-oxa-
thiole-200,200-dioxide) (14). According to the general procedure
TSAO-T (103 mg, 0.17 mmol), Na2CO3 (148 mg, 1.39 mmol) and
Bu4NBr (5.6 mg, 1.7 ꢃ 10ꢄ2 mmol) in CH2Cl2 (10 mL) and water
4.38 (m, 1H, H-40), 4.02 (dd, J5 a,4 ¼ 2.6 Hz, J5 a,5 b ¼ 12.6 Hz, 1H, H-
0
0
0
0
50a), 3.92 (dd, J5 b,4 ¼ 1.6 Hz, 1H, H-50b), 2.88 (t, Ja,b ¼ 6.3 Hz, 2H,
CH2a), 2.81 (d, JNH,CH3 ¼ 4.8 Hz, 3H, CH3NH), 2.34 (t, Jc,b ¼ 7.2 Hz, 2H,
CH2c), 2.10 (m, 2H, CH2b), 1.99 (s, 3H, CH3 base), 1.00 (s, 9H,
SiC(CH3)3), 0.85 (s, 9H, SiC(CH3)3), 0.24 (s, 3H, Si(CH3)2), 0.23 (s, 3H,
Si(CH3)2), 0.09 (s, 3H, Si(CH3)2), ꢄ0.04 (s, 3H, Si(CH3)2); 13C NMR
0
0
(20 mL) were treated with glutaryl dichloride (78 mL, 0.61 mmol)
and quenched with t-BuOH (1 mL, 0.01 mol). The crude product
was purified by HPLC to give 14 (82 mg, 62%) as a white solid.
(CDCl3; 75 MHz) :
d
175.4 (CO), 172.9 (CO), 161.9 (C-4), 150.3 (C-400),
Rf ¼ 0.80 (EtOAc/Cyclohexane : 5/5); Mp ¼ 179e180 ꢀC; ½a D21
: ꢄ19
ꢅ
149.1 (C-2), 134.6 (C-6), 112.0 (C-5), 93.1 (C-300), 92.8 (C-30), 86.7 (C-
10), 83.8 (C-40), 75.0 (C-20), 62.2 (C-50), 39.3, 34.7 (2x CH2), 26.3
(CH3NH), 26.0, 25.2 (2x SiC(CH3)3), 19.7 (CH2), 18.4, 17.8 (2x
SiC(CH3)3), 12.2 (CH3 base), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.6 (2x Si(CH3)2).
HRMS: C30H52N4O10SSi2Na calcd. 739.2840, found 739.2837.
(c 0.1, CH2Cl2); 1H NMR (CDCl3; 300 MHz) 0:0 d 7.25 (s, 1H, H-6), 5.95
0
0
0
(d, J 1 ,2 ¼ 8.0 Hz, 1H, H-1 ), 5.66 (s, 1H, H-3 ), 5.59 (s, 2H, NH2), 4.53
(d, 1H, H-20), 4.36 (m, 1H, H-40), 4.03 (dd, J5 a,4 ¼ 2.7 Hz,
0
0
J5 a,5 b ¼ 12.5 Hz, 1H, H-50a), 3.92 (dd, J5 b,4 ¼ 2.3 Hz,1H, H-5 b), 2.89
(t, Ja,b ¼ 6.9 Hz, 2H, CH2a), 2.38 (t, Jc,b ¼ 7.4 Hz, 2H, CH2c), 2.05 (m,
2H, CH2b), 2.00 (s, 3H, CH3 base), 1.47 (s, 9H, OtBu), 0.99 (s, 9H,
SiC(CH3)3), 0.87 (s, 9H, SiC(CH3)3), 0.25 (s, 3H, Si(CH3)2), 0.23 (s, 3H,
Si(CH3)2), 0.09 (s, 3H, Si(CH3)2), ꢄ0.03 (s, 3H, Si(CH3)2); 13C NMR
0
0
0
0
0
4.3.2.4. [1-[20,50-Bis-O-tert-butyldimethylsilyl-
b-d-ribofuranosyl]-3-
N-(N,N- dimethylaminoglutaryl)thymine]-30-spiro-500-(400-amino-100,
200-oxathiole-200,200-dioxide) (12). According to the general proce-
dure TSAO-T (55.2 mg, 9.6 10ꢄ2 mmol), Na2CO3 (79 mg,
0.749 mmol) and Bu4NBr (3.0 mg, 9.6 10ꢄ3 mmol) in CH2Cl2 (5 mL)
(CDCl3; 75 MHz) : d
175.0 (CO), 172.1 (CO), 161.8 (C-4), 150.3 (C-400),
148.9 (C-2), 135.1 (C-6), 111.9 (C-5), 93.4 (C-300), 92.1 (C-30), 87.1 (C-
10), 83.7 (C-40), 74.7 (C-20), 62.1 (C-50), 39.5, 33.9 (CH2), 28.1 (Ot-Bu),
26.0, 25.2 (SiC(CH3)3), 18.9 (CH2), 18.4, 17.8 (SiC(CH3)3), 12.2 (CH3
base), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.7 (Si(CH3)2); HRMS : C33H57N3O11SSi2Na
calcd. 782.3150, found 782.3161.
and water (10 mL) were treated with glutaryl dichloride (41.8
0.327 mmol) and quenched with dimethylamine (40% in water)
(70.5 L, 0.562 mmol). The crude product was purified by HPLC
mL,
m
(MeOH/H2O) followed by crystallization from water to give 12
(45 mg, 66%) as a white solid. Rf ¼ 0.10 (EtOAc/Cyclohexane : 5/5);
4.3.2.7. [1-[20,50-Bis-O-tert-butyldimethylsilyl-
N-(benzyloxyglutaryl)
b
-d-ribofuranosyl]-3-
Mp ¼ 168e170 ꢀC; ½a D21
ꢅ
¼ ꢄ23 (c 0.1, CH2Cl2); 1H NMR (0CDCl3;
thymine]-30-spiro-500-(400-amino-100,200-oxa-
300 MHz) :
d
7.28 (s, 1H, H-6), 6.02 (d, 1H, J 1 ,2 ¼ 8.2 Hz, H-1 ), 5.76
thiole-200,200-dioxide) (15). According to the general procedure
TSAO-T (51 mg, 8.6 ꢃ 10ꢄ2 mmol), Na2CO3 (73 mg, 0.68 mmol) and
Bu4NBr (2.8 mg, 8.6 ꢃ 10ꢄ3 mmol) in CH2Cl2 (5 mL) and water
0
0
(s, 2H, NH2), 5.67 (s, 1H, H-300), 4.47 (d, 1H, H-20), 4.37 (m, 1H, H-40),
4.02 (dd, J5 a,4 ¼ 2.70 Hz, J5 a,5 b ¼ 12.5 Hz, 1H, H-50a), 3.92 (dd,
0
0
0
0
0
0
J5 b,4 ¼ 1.7 Hz,1H, H-5 b), 3.04 (s, 3H, NCH3), 2.96 (s, 3H, NCH3), 2.92
(m, 2H, CH2a), 2.49 (t, Jc,b ¼ 7.1 Hz, 2H, CH2c), 2.09 (m, 2H, CH2b),1.99
(s, 3H, CH3 base), 0.99 (s, 9H, SiC(CH3)3), 0.86 (s, 9H, SiC(CH3)3), 0.24
(s, 3H, Si(CH3)2), 0.23 (s, 3H, Si(CH3)2), 0.07 (s, 3H, Si(CH3)2), ꢄ0.04
(10 mL) were treated with glutaryl dichloride (38
m
L, 0.30 mmol)
and quenched with BnOH (53
mL, 0.51 mmol). The crude product
was purified by HPLC to give 15 (35 mg, 51%). Rf ¼ 0.29 (EtOAc/
Cyclohexane : 5/5); Mp ¼ 185e187 ꢀC; ½a D21
¼ ꢄ33 (c 0.1, CH2Cl2);
ꢅ
(s, 3H, Si(CH3)2); 13C NMR (CDCl3; 75 MHz) :
d
175.6 (CO), 172.0
NMR 1H (CDCl3; 300 MHz) :
d
7.39e7.38 (m, 5H, C5H060), 7.25 (s, 1H,
(CO), 161.8 (C-4), 150.3 (C-400), 149.0 (C-2), 134.7 (C-6), 111.9 (C-5),
93.2 (C-300), 92.5 (C-30), 86.2 (C-10), 83.7 (C-40), 74.9 (C-20), 62.1 (C-
50), 39.6 (CH2), 37.2 (CH3N), 35.4 (CH3N), 31.4 (CH2), 26.0, 25.2 (2x
SiC(CH3)3), 19.1 (CH2), 18.4, 17.8 (2x SiC(CH3)3), 12.2 (CH3
base), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.6 (2x Si(CH3)2). HRMS: C31H54N4O10S-
Si2Na calcd. 753.2997, found 753.3003.
H-6), 5.95 (d, J 1 ,2 ¼ 8.0 Hz, 1H, H-1 ), 5.65 (s, 1H, H-3 ), 5.57 (s, 2H,
0
0
0
NH2), 5.16 (s, 2H, CH2C6H5), 4.53 (d, 1H, H-20), 4.36 (m, 1H, H-40),
4.03 (dd, J5 a,4 ¼ 2.7 Hz, J5 a,5 b ¼ 12.5 Hz, 1H, H-50a), 3.92 (dd,
0
0
0
0
J5 b,4 ¼ 2.2 Hz, 1H, H-50b), 2.92 (t, Ja,b ¼ 6.9 Hz, 2H, CH2a), 2.55 (t,
Jc,b ¼ 7.4 Hz, 2H, CH2c), 2.12 (m, 2H, CH2b), 2.00 (s, 3H, CH3 base),
0.99 (s, 9H, SiC(CH3)3), 0.87 (s, 9H, SiC(CH3)3), 0.24 (s, 3H, Si(CH3)2),
0.22 (s, 3H, Si(CH3)2), 0.09 (s, 3H, Si(CH3)2), ꢄ0.03 (s, 3H, Si(CH3)2);
0
0
4.3.2.5. [1-[20,50-Bis-O-tert-butyldimethylsilyl-
b
-d-ribofuranosyl]-3-
13C NMR (CDCl3; 75 MHz) :
d 174.9 (CO), 172.6 (CO), 161.8 (C-4),
N-(thiomethylglutaryl) thymine]-30-spiro-500-(400-amino-100,200-oxa-
thiole-200,200-dioxide) (13). According to the general procedure
TSAO-T (84 mg, 0.14 mmol), Na2CO3 (121 mg, 1.14 mmol) and
Bu4NBr (4.6 mg, 1.42 ꢃ 10ꢄ2 mmol) in CH2Cl2 (7 mL) and water
150.2 (C-400), 148.9 (C-2), 135.1 (C-6), 128.6, 128.2, 128.1 (C6H5), 111.9
(C-5), 93.4 (C-300), 92.1 (C-30), 87.1 (C-10), 83.7 (C-40), 74.7 (C-20), 66.3
(CH2C5H6), 62.1 (C-50), 39.4, 32.5 (CH2), 26.0, 25.2 (SiC(CH3)3), 18.8
(CH2), 18.4, 17.8 (SiC(CH3)3), 12.2 (CH3 base), ꢄ4.5, ꢄ4.8, ꢄ5.2, ꢄ5.6
(Si(CH3)2); HRMS : C36H55N3O11SSi2Na calcd. 816.2994, found
816.2969.
(14 mL) were treated with glutaryl dichloride (64 mL, 0.49 mmol)
and quenched with MeSNa (60 mg, 0.85 mmol). The crude product