Journal of Medicinal Chemistry
Article
N,N′-(Dodecan-1,12-diyl)bis[(1Z)-4-hydroxy-1-methyl-2-(propyl-
disulfanyl)-buten-1-yl)]diformamide 2c. According to general
procedure A, the title compound (1.8 g, 87%) was obtained, as a
yellow oil, from 1 (2 g, 3.25 mmol), NaOH (8.5 mL), n-butyl
thiosulfate (5.5 g, 19.5 mmol), and CHCl3 (15 mL). The compound
CDCl3): δ 7.93 and 7.79 (2s, 2H, major and minor rotamers), 4.98−
4.90 (m, 2H), 4.36−4.10 (m, 6H), 3.40−3.23 (m, 4H), 2.92 (t, J = 6.7,
4H), 2.29 (s, 6H), 2.14−1.95 (m, 8H), 1.60−1.10 (m, 38H), 0.91,
0.88, 0.84, 0.81 (2d, 12H). 13C NMR (75 MHz, CDCl3): δ 172.4,
172.3, 162.2, 161.3, 155.6, 136.2, 135.1, 130.4, 130.0, 79.9, 62.8, 60.4,
58.5, 53.4, 48.8, 42.9, 31.3, 29.5, 29.3, 29.3, 29.2, 28.3, 27.8, 27.2, 26.8,
23.6, 23.3, 19.0, 18.9, 18.7, 17.6, 17.5. MS (ESI+): 979.5 [M + H]+.
N,N′-(Dodecan-1,12-diyl)bis[(3Z)-4-(formylamino)3-
(methyldisulfanyl)penten-3-yl] Bis[(2,6-bis(tert-butoxycarbonyl)-
diamino)hexanoate] 4b. According to general procedure B, the
title compound (665 mg, 68%) was obtained, as a white amorphous
solid, from 2a (453 mg, 0.78 mmol), (Boc)2-Lys (1.08 g, 3.11 mmol),
N,N′-dicyclohexylcarbodiimide (643 mg, 3.11 mmol), DMAP (57 mg,
0.467 mmol), and CH2Cl2 (10 mL). The compound was purified by
1
was purified by column chromatography (CH2Cl2/MeOH, 98:2). H
NMR (250 MHz, CDCl3): δ 7.93 and 7.85 (2s, 2H, major and minor
rotamers), 3.78−3.62 (m, 4H), 3.49−3.27 (m, 4H), 2.85 (t, J = 6.6,
4H), 2.57 (t, J = 7.2, 4H), 1.96 (s, 6H), 1.70−0.80 (m, 30H). 13C
NMR (75 MHz, CDCl3): δ 163.1, 162.3, 135.0, 133.3, 132.8, 132.2,
61.0, 60.5, 53.9, 48.8, 43.3, 41.9, 41.7, 33.3, 29.9, 29.7, 29.6, 29.5, 28.2,
27.6, 27.3, 22.7, 19.5, 19.0, 13.5. MS (ESI+): 637.4 [M + H]+. HRMS
(TOF-ESI+) calcd for C30H57N2O4S4 [M + H]+: 637.3201, found:
637.3205.
1
column chromatography (cyclohexane/AcOEt, 4:6). H NMR (300
N,N′-(Dodecan-1,12-diyl)bis[(1Z)-2-(benzyldisulfanyl)-4-hydroxy-
1-methyl-buten-1-yl)] diformamide 2d. According to general
procedure A, the title compound (1.11 g, 94%) was obtained, as a
yellow oil, from 1 (1 g, 1.62 mmol), NaOH (4.1 mL), benzyl
MHz, CDCl3): δ 7.92 and 7.79 (s, 2H, major and minor rotamers),
5.02 (bs, 2H), 4.52 (bs, 2H), 4.35−4.10 (m, 6H), 3.45−3.23 (m, 4H),
3.10−2.85 (2 m, 8H), 2.29 (s, 6H), 1.98 and 1.95 (2s, 6H), 1.80−1.10
(m, 66H). 13C NMR (75 MHz, CDCl3): δ 172.8, 162.3, 156.1, 136.2,
129.9, 80.0, 79.2, 62.9, 53.3, 48.7, 42.9, 40.0, 32.3, 29.7, 29.5, 29.3,
28.5, 28.3, 27.8, 27.2, 26.9, 23.3, 22.5, 18.9, 18.7. MS (ESI+): 1237.4
[M + H]+.
2,2′-((3Z,19Z)-5,18-Diformyl-4,19-dimethyl-1,2-dithia-5,18-dia-
zacycloicosa-3,19-diene-3,20-diyl)bis(ethane-2,1-diyl) Bis[(2-(tert-
butoxycarbonyl)amino)-3-methylbutanoate] 5a. According to gen-
eral procedure B, the title compound (381 mg, 70%) was obtained, as
a white amorphous solid, from 3 (300 mg, 0.616 mmol), Boc-Val (401
mg, 1.85 mmol), N,N′-dicyclohexylcarbodiimide (382 mg, 1.85 mmol),
4-(dimethylamino)pyridine (38 mg, 0.31 mmol), and CH2Cl2 (8 mL).
The compound was purified by column chromatography (cyclo-
hexane/AcOEt, 4:6). 1H NMR (300 MHz, CDCl3): δ 7.93 and 7.81 (s,
2H, major and minor rotamers), 5.0−4.83 (m, 2H), 4.35−4.02 (m,
6H), 3.55−3.12 (m, 4H), 3.02−2.75 (2 m, 4H), 2.15−1.80 (m, 8H),
1.50−1.10 (m, 22H), 0.90, 0.88, 0.83, 0.81 (2d, 12H). 13C NMR (75
MHz, CDCl3): δ 172.4, 162.0, 161.3, 155.6, 129.4, 79.9, 62.4, 58.5,
47.7, 42.5, 31.3, 30.1, 28.3, 28.0, 27.7, 27.5, 27.1, 27.0, 28.9, 26.8, 26.4,
19.018.5, 17.6. HRMS (TOF-ESI+) calcd for C34H61N4O6S2 [M − H
− 2Cl]+: 685.4033, found: 685.4003.
2,2′-((3Z,19Z)-5,18-Diformyl-4,19-dimethyl-1,2-dithia-5,18-dia-
zacycloicosa-3,19-diene-3,20-diyl)bis(ethane-2,1-diyl) Bis[(2,6-bis-
(tert-butoxycarbonyl)diamino)hexanoate] 5b. According to general
procedure B, the title compound (479 mg, 70%) was obtained, as a
white amorphous solid, from 3 (290 mg, 0.517 mmol), (Boc)2-Lys
(829 mg, 2.39 mmol), 1-ethyl-3-(3-dimethylaminopropyl)-
carbodiimide (423 μL, 2.39 mmol), DMAP (37 mg, 0.30 mmol),
and CH2Cl2 (8 mL). The compound was purified by column
chromatography (cyclohexane/AcOEt, 4:6). 1H NMR (300 MHz,
CDCl3): δ 8.0−7.86 (m, 4H), 5.20−5.05 (m, 2H), 4.85−4.60 (m, 2H),
4.42−4.10 (m, 8H), 3.80−3.20 (m, 8H), 3.15−2.70 (m, 4H), 2.0−1.90
(m, 6H), 1.85−1.60 (m, 4H), 1.50−1.20 (m, 36H). 13C NMR (75
MHz, CDCl3): δ 172.8, 162.5, 162.4, 161.8, 156.3, 156.2, 155.5, 136.8,
136.2, 131.9, 130.6, 129.6, 80.1, 79.1, 62.6, 60.8, 60.4, 60.0, 53.3, 48.1,
47.5, 42.3, 42.2, 40.0, 34.0, 33.4, 32.3, 28.5, 28.4, 28.3, 28.2, 27.6, 27.3,
27.1, 27.0, 26.5, 22.5, 18.7, 18.6, 18.4, 17.8, 17.4. MS (ESI+): 1165.8
[M + Na]+.
General Procedure C. Deprotection of tBoc-aminoacyl disulfide
prodrugs: Protected pro-prodrug was dissolved in a cold hydrogen
chloride solution (4 M in 1,4-dioxane). The mixture was stirred for 45
min at 0 °C and then concentrated in vacuum. The residue was
triturated in diethyl ether. After removal of the diethyl ether, the
residue was dissolved in water and freeze-dried to afford the desired
compound as its hydrochloride salt.
1
thiosulfate (1.84 g, 8.13 mmol), and CHCl3 (10 mL). H NMR (300
MHz, CDCl3): δ 7.88 and 7.80 (2s, 2H, major and minor rotamers),
7.27−7.15 (m, 10H), 3.81 (s, 4H), 3.65−3.3.50 (m, 4H), 3.35−3.22
(m, 4H), 2.72−2.65 (m, 4H), 1.90 and 1.88 (2s, 6H), 1.47−1.38 (m,
4H), 1.25−1.10 (m, 18H). 13C NMR (75 MHz, CDCl3): δ 162.8,
161.9, 136.5, 136.3, 134.7, 132.9, 132.5, 131.6, 129.3, 129.2, 128.7,
128.6, 127.7, 127.6, 60.5, 60.2, 48.4, 44.6, 44.5, 43.1, 33.1, 29.5, 29.3,
29.2, 27.9, 27.2, 26.9, 19.3, 18.7. MS (ESI+): 733.4 [M + H]+. HRMS
(TOF-ESI+) calcd for C38H57N2O4S4 [M + H]+: 733.3201, found:
733.3203.
(3Z,19Z)-3,20-Bis(2-hydroxyethyl)-4,19-dimethyl-1,2-dithia-5,18-
diazacycloicosa-3,19-diene-5,18-dicarbaldehyde 3. Compound 1 (2
g, 3.27 mmol) was dissolved in a 2 N NaOH aqueous solution (8 mL,
16.33 mmol, 5 equiv), and the mixture was stirred in an ice bath for 30
min. Then dichloromethane (330 mL) was added to the reaction
mixture and, under vigorous stirring, tert-butyl nitrite (1.73 mL, 13.06
mmol, 4 equiv) was added dropwise. After 10 h stirring, the organic
layer was separated and washed with aqueous sodium bicarbonate
solution followed by brine. The organic layer was dried over
magnesium sulfate, filtered, and evaporated in vacuum. The residue
was purified by silica gel chromatography (gradient: CH2Cl2 to
CH2Cl2/MeOH, 95:5) to give compound 3 (400 mg, 25%) as an oily
1
yellow liquid. H NMR (300 MHz, DMSO-d6): δ 8.01 and 7.81 (2s,
2H, major and minor rotamers), 4.70 (m, 2H), 3.60−3.30 (m, 4H,
overlap with water), 2.75−2.55 (m, 4H), 2.10−1.80 (m, 8H), 1.45−
1.15 (m, 20H). 13C NMR (75 MHz, DMSO-d6): δ 162.1, 162.0, 161.9,
161.8, 161.5, 137.8, 137.7, 136.1, 129.7, 129.4, 129.3, 129.2, 66.3, 60.0,
59.9, 41.9, 41.6, 34.4, 29.0, 28.9, 28.8, 27.3, 27.2, 26.7, 26.3, 18.3, 18.1,
17.9. MS (ESI+): 487.5 [M + H]+. HRMS (TOF-ESI+) calcd for
+
C24H43N2O4S2 [M + H]+: 487.2648, found: 487.2664.
General Procedure B. Preparation of tBoc-aminoacyl disulfide
prodrugs: To an ice-cold solution of the protected amino acid (3 to 4.5
equiv) in dichloromethane was added N,N′-dicyclohexylcarbodiimide
(3 or 4 equiv) or 1-ethyl-3-(3-dimethylaminopropyl)carbodiimide (4
or 4.5 equiv) and DMAP (0.5 or 0.6 equiv). The mixture was stirred
for 15 min, and a solution of the required disulfide prodrug (either 2a
or 3) in dichloromethane was added. After 2−3 h stirring at room
temperature, the solvent was then evaporated under reduced pressure.
The residue was taken up in dichloromethane, and the resulting
organic layer was washed successively with a 1 M aqueous KHSO4
solution, a saturated aqueous NaHCO3 solution, and brine and then
dried over Na2SO4. The solvent was removed in vacuum, and the
residue was purified by column chromatography to afford the expected
compound.
N,N′-(Dodecan-1,12-diyl)bis[(3Z)-4-(formylamino)3-
(methyldisulfanyl)penten-3-yl] Bis[(2-(tert-butoxycarbonyl)amino)-
3-methylbutanoate] 4a. According to general procedure B, the title
compound (617 mg, 85%) was obtained, as a white amorphous solid,
from 2a (430 mg, 0.742 mmol), Boc-Val (483 mg, 2.22 mmol), N,N′-
dicyclohexylcarbodiimide (459 mg, 2.22 mmol), DMAP (45 mg, 0.371
mmol), and CH2Cl2 (8 mL). The compound was purified by column
chromatography (cyclohexane/AcOEt, 1:1). 1H NMR (300 MHz,
(3Z,3′Z)-4,4′-(Dodecan-1,12-diyl)bis[4-(formylamino)-3-
(methyldisulfanyl)penten-3-yl] Bis[(2-amino-3-methylbutanoate)
hydrochloride] 6a. According to general procedure C, the title
compound (406 mg, 78%) was obtained as a white powder from 4a
(597 mg, 0.610 mmol) and 4 N hydrogen chloride solution in 1,4-
1
dioxane (22 mL). H NMR (300 MHz, DMSO-d6): δ 8.72 (bs, 6H),
8.01 and 7.79 (2s, 2H, major and minor rotamers), 4.40−4.25 (m,
4H), 3.90−3.8 (m, 2H), 3.40−3.30 (m, 4H), 3.05−2.90 (m, 4H), 2.39
and 2.35 (2s, 6H), 2.30−2.15 (m, 2H), 2.02 and 1.94 (2s, 6H), 1.50−
4625
dx.doi.org/10.1021/jm3000328 | J. Med. Chem. 2012, 55, 4619−4628