R. Koudih et al. / European Journal of Medicinal Chemistry 53 (2012) 408e415
413
4.2.10. (ꢀ)-trans-tert-Butyl 1-[3-fluoro-4-(azidomethyl)piperidin-
1-yl]carboxylate (trans-7)
4.33e4.17 (m, 2H), 3.9 (bs, 1H), 3.63e3.42 (m, 2H), 2.73e2.63 (m,
2H), 1.92e1.78 (m, 2H), 1.38 (s, 9H), 1.33e1.25 (m, 1H). 13C NMR
2
Following the procedure for the preparation of cis-6, the
compound trans-7 was obtained from trans-5 (1.33 g, 4.27 mmol) as
(CDCl3):
d
162.5, 158.0, 154.4, 110.7, 90.1 (d, JCeF ¼ 176 Hz), 80.1,
47.0, 43.1 (d, J ¼ 2.2 Hz), 43, 42.2 (d, J ¼ 16.6 Hz), 28.3, 27.2. 19F NMR
a yellow oil (1.04 g, 94%). 1H NMR (CDCl3):
d
4.40e4.22 (m, 2H), 4.10
(CDCl3):
d
ꢂ185.8 (d, J ¼ 48.8 Hz). HRMS m/z calcd. for C15H24FN4O2
(bs, 1H), 3.62 (dd, J ¼ 3.4 Hz, J ¼ 12.2 Hz, 1H), 3.44 (dd, J ¼ 6.4 Hz,
311.1883, found: 311.1873. Anal. calcd for C15H23FN4O2: C 58.05, H
7.47, N 18.05, found: C 58.39, H 8.08, N 17.79. HPLC purity:
H2O:MeCN, 60:40, tR ¼ 12.7 min.
J ¼ 12.2 Hz, 1H), 2.76e2.69 (m, 2H), 1.89e1.85 (m, 2H), 1.50e1.39
(m, 10H). 13C NMR (CDCl3):
d
154.3, 87.8 (d, J ¼ 176 Hz), 80.3, 52.3
(d, J ¼ 2.3 Hz), 46.9, 42.2, 42.0, 28.4, 27.3. 19F NMR (CDCl3):
d L187.7
(d, J ¼ 46 Hz). HRMS m/z calcd. for C11H20N4O2F 259.1570, found:
4.2.15. (ꢀ)-cis-4-Methylbenzyl 1-[4-(pyrimidin-2-ylamino)
259.1562. HPLC purity: H2O:MeCN, 55:45, tR ¼ 13.18 min (220 nm).
methylpiperidin-3-ol-1-yl]carboxylate (cis-10)
HCl gas was bubbled through a solution of cis-8 (560 mg,
1.81 mmol) in EtOAc (3 mL) for about 45 min. The mixture was
then concentrated under reduced pressure and the crude amine
hydrochloride was dissolved in dry DMF (5 mL). DIPEA (710 mg,
5.43 mmol) was added and the resulting solution was
stirred for 30 min. To a solution of N,N0-disuccinimidyl carbonate
(926 mg, 3.62 mmol) in dry acetonitrile (10 mL), was added 4-
methylbenzyl alcohol (441 mg, 3.54 mmol) in dry CH2Cl2
(10 mL) and a catalytic amount of DMAP. The reaction mixture
was stirred overnight at room temperature. The solution was then
added to the amine hydrochloride previous prepared and stirred
for two days at room temperature. The reaction mixture was
diluted with water (15 mL) and extracted with EtOAc (4 ꢃ 15 mL).
The combined organic layers were dried over MgSO4, concen-
trated under reduced pressure and purified by chromatography
on silica gel (CH2Cl2:MeOH, 98:2) led to cis-10 as a yellow oil
4.2.11. (ꢀ)-cis-tert-Butyl 1-[4-(pyrimidin-2-ylamino)
methylpiperidin-3-ol-1-yl]carboxylate (cis-8)
A mixture of cis-6 (690 mg, 2.69 mmol) and 10% palladium on
carbon (200 mg) in methanol (40 mL) was stirred under H2
atmosphere (1.2 bars) at room temperature for 7 h. The reaction
mixture was filtered off then concentrated to give the intermediate
amine as a yellow oil (610 mg, 99%). The intermediate amine
(305 mg,1.32 mmol) was dissolved in tert-amyl alcohol (4 mL), then
2-chloropyrimidine (226 mg, 1.98 mmol) and DIPEA (2 mL) were
added under nitrogen atmosphere. The reaction mixture was stir-
red 48 h at 90 ꢁC, then diluted with water (10 mL) and extracted
with EtOAc (3 ꢃ 10 mL). The combined organic layers were dried
over MgSO4 and concentrated under reduced pressure. Purification
by silica gel chromatography (CH2Cl2:MeOH, 99:1) afforded cis-8 as
yellow crystals (210 mg, 51%). Mp 125e127 ꢁC. 1H NMR (CDCl3):
d
8.18 (d, J ¼ 4.8 Hz, 2H), 6.46 (m, 1H), 4.20e4.10 (m, 2H), 3.70 (bs,
(466 mg, 72%). 1H NMR (CDCl3):
d
8.15 (d, J ¼ 4.8 Hz, 2H), 7.17 (d,
1H), 3.57e3.49 (m, 1H), 3.14e3.10 (m, 1H), 2.73e2.63 (m, 2H),
J ¼ 8 Hz, 2H), 7.06 (d, J ¼ 8 Hz, 2H), 6.44 (t, J ¼ 4.8 Hz, 1H), 5.83
(bs, 1H), 5.15e4.98 (m, 2H), 4.30e4.20 (m, 2H), 3.73e3.66 (m, 1H),
3.53e3.47 (m,1H), 3.12e3.11 (m, 1H), 2.76e2.69 (m, 2H), 2.25 (s,
1.65e1.59 (m, 2H), 1.39 (s, 9H), 1.28e1.26 (m, 1H). 13C NMR (CDCl3):
d
162.7, 158.1, 154.6, 110.5, 79.4, 63.8, 49.6, 43.3, 43.2, 41.5, 28.4,
23.8. HRMS m/z calcd. for C15H25N4O3 309.1927, found: 309.1924.
Anal. calcd for C15H24N4O3.0.2H2O: C 57.74, H 7.88, N 17.95, found: C
57.34, H 8.30, N 17.57. HPLC purity: H2O:MeCN, 70:30, tR ¼ 9.8 min.
3H), 1.65e1.64 (m, 2H), 1.27 (bs, 1H). 13C NMR (CDCl3):
d 162.7,
158.1, 156.2, 137.6, 134.0, 129.1, 128.0, 110.6, 67.0, 63.6, 49.7, 43.8,
43.2, 41.5, 23.7, 21.2. HRMS m/z calcd. for C19H25N4O3 357.1927,
found: 357.1928.
4.2.12. (ꢀ)-trans-tert-Butyl 1-[4-(pyrimidin-2-ylamino)
methylpiperidin-3-ol-1-yl]carboxylate (trans-8)
Following the procedure for the preparation of cis-8, the
compound trans-8 was obtained from trans-6 (670 mg, 2.6 mmol)
as yellow crystals (495 mg, 61%). Mp 114e116 ꢁC. 1H NMR (CDCl3):
4.2.16. (ꢀ)-trans-4-Methylbenzyl 1-[4-(pyrimidin-2-ylamino)
methylpiperidin-3-ol-1-yl]carboxylate (trans-10)
Following the procedure for the preparation of cis-10, the
compound trans-10 was obtained from trans-8 (250 mg,
d
8.18 (d, J ¼ 4.8 Hz, 2H), 6.50 (t, J ¼ 4.8 Hz, 2H), 4.17e3.94 (m, 3H),
3.19e3.05 (m, 2H), 2.59e2.46 (m, 2H), 1.55e1.39 (m, 12H). 13C NMR
(CDCl3): 162.8, 158.1, 154.6, 110.7, 79.7, 67.1, 49.1, 45.4, 43.2, 43.0,
0.81 mmol) as a yellow oil (160 mg, 55%). 1H NMR (CDCl3):
d 8.30 (d,
J ¼ 4.8 Hz, 2H), 7.27 (d, J ¼ 8 Hz, 2H), 7.18 (d, J ¼ 8 Hz, 2H), 6.60 (t,
J ¼ 4.8 Hz, 1H), 5.62 (bs, 1H), 5.1 (bs, 2H), 4.15e4.08 (m, 3H), 3.28
(bs, 1H), 3.19e3.15 (m, 1H), 2.78e2.67 (m, 2H), 2.38 (s, 3H),
d
28.4, 27.9. HRMS m/z calcd. for C15H25N4O3 309.1927, found:
309.1919. HPLC purity: H2O:MeCN, 60:40, tR ¼ 5.1 min.
1.63e1.58 (m, 3H). 13C NMR (CDCl3):
d 162.8, 158.1, 155.2, 137.8,
133.6, 129.1, 128.1, 110.9, 67.1, 66.9, 49.2, 45.5, 43.7, 42.8, 27.8, 23.2.
HRMS m/z calcd. for C19H25N4O3 357.1927, found: 357.1920. HPLC
purity: H2O:MeCN, 60:40, tR ¼ 9.4 min.
4.2.13. (ꢀ)-cis-tert-Butyl 1-[3-fluoro-4-(pyrimidin-2-ylamino)
methylpiperidin-1-yl]carboxylate (cis-9)
Following the procedure for the preparation of cis-8, the
compound cis-9 was obtained from cis-7 (818 mg, 3.17 mmol) as
a yellow solid (457 mg, 46%). Mp 131e133 ꢁC. 1H NMR (CDCl3):
4.2.17. (ꢀ)-cis-4-Methylbenzyl 1-[3-fluoro-4-(pyrimidin-2-
ylamino)methylpiperidin-1-yl]carboxylate (cis-11)
d
8.20 (d, J ¼ 4.7 Hz, 2H), 6.46 (t, J ¼ 4.8 Hz,1H), 5.76 (bs,1H), 4.67 (d,
Following the procedure for the preparation of cis-10, the
compound cis-11 was obtained from cis-9 (160 mg, 0.516 mmol) as
J ¼ 48 Hz, 1H), 4.33e4.18 (m, 2H), 3.43e3.31 (m, 2H), 2.79e2.64 (m,
2H), 2.09e1.84 (m, 1H), 1.56e1.50 (m, 2H), 1.39 (s, 9H). 13C NMR
a yellow solid (65 mg, 35%). mp 131e133 ꢁC. 1H NMR (CDCl3):
d 8.18
2
(CDCl3):
d
162.5, 158.1, 155.2, 110.7, 86.6 (d, JCeF ¼ 176 Hz), 79.8,
(d, J ¼ 4.8 Hz, 2H), 7.17 (d, J ¼ 8.4 Hz, 2H), 7.08 (d, J ¼ 7.8 Hz, 2H),
6.45 (t, J ¼ 4.8 Hz, 1H), 5.77 (bs, 1H), 5.02e5.01 (m, 2H), 4.79e4.17
(m, 3H), 3.44e3.29 (m, 2H), 2.85e2.67 (m, 2H), 2.27 (s, 3H),
48.2, 42.9, 42.7 (d, J ¼ 3.3 Hz), 38.7 (d, J ¼ 19.9 Hz), 28.4, 23.7. 19F
NMR (CDCl3):
d
ꢂ203.2 (d, J ¼ 30 Hz). HPLC purity: H2O:MeCN,
60:40, tR ¼ 15.4 min.
2.02e1.89 (m, 1H), 1.54 (bs, 2H). 19F NMR (CDCl3):
m/z calcd. for C19H24FN4O2: 359.1883, found: 359.1887. HPLC purity:
H2O:MeCN, 55:45, tR ¼ 12.6 min.
d
ꢂ203.1. HRMS
4.2.14. (ꢀ)-trans-tert-Butyl 1-[3-fluoro-4-(pyrimidin-2-ylamino)
methylpiperidin-1-yl]carboxylate (trans-9)
Following the procedure for the preparation of cis-8, the
compound trans-9 was obtained from trans-7 (789 mg, 3.06 mmol)
as a yellow solid (574 mg, 60%). Mp 124e126 ꢁC. 1H NMR (CDCl3):
4.2.18. (ꢀ)-trans-4-Methylbenzyl 1-[3-fluoro-4-(pyrimidin-2-
ylamino)methylpiperidin-1-yl]carboxylate (trans-11)
Following the procedure for the preparation of cis-10, the
compound trans-11 was obtained from trans-9 (164 mg, 0.52 mmol)
d
8.20 (d, J ¼ 4.7 Hz, 2H), 6.46 (t, J ¼ 4.7 Hz, 1H), 5.43 (bs, 1H),