Orange (Fluka), NiCl2·6H2O (Strem Chemicals), CuCl2·2H2O
(Fluka), CHES buffer (Fluka), and angiotensin I (Asp-Arg-Val-
Tyr-Ile-His-Pro-Phe-His-Leu) and angiotensin II (Asp-Arg-Val-
Tyr-Ile-His-Pro-Phe) (both Bachem) were used as received. Stock
solutions of all dyes (1 mM, except Xylenol Orange: 0.5 mM),
the metal salts (10 mM), the peptides (0.1 mM) and CHES buffer
(pH 8.4, 0.2 M) were prepared in bidistilled water. All UV/Vis
spectra were recorded on a Lambda 35 spectrometer (Perkin
Elmer). Electrospray-ionisation MS data were acquired on a
Q-Tof Ultima mass spectrometer (Waters) fitted with a standard
Z-spray ion source and operated in the negative ionization mode.
Experimental parameters were set as follows: capillary voltage:
residuals of < 0.005, indicating that the data was excellently
modeled. Complete spectral overlays, calculated spectra and
speciation diagrams for all titrations are shown in the ESI.† The
standard deviations for the fitted parameters (listed in parentheses
in Table 1) were estimated using the sum-of-squared residuals and
inverted curvature matrices as obtained from the iterative fitting
processes (see ref. 13 for details).
Mass spectrometric titrations
Samples were prepared by mixing appropriate amounts of stock
solutions of the dye ([dye]tot = 0.1 mM) and the metal salt (0.05 ≤
[M2+]tot ≤ 0.2 mM) in water. The pH was then adjusted to 8.4 ( 0.2)
using NaOH(aq) (0.01 M).
◦
3 kV, sample cone: 50 V, source temperature: 80 C, desolvation
temperature: 200 ◦C, acquisition window: m/z 50-1000 in 1 s.
5 mL of the sample was introduced into the mass spectrometer by
infusion at a flow rate of 20 mL min-1 with a solution of ACN–
H2O 50 : 50 (v/v). External calibration was carried out with a
solution of phosphoric acid at 0.01%. Data were processed using
the MassLynx 4.1 software.
Mass spectrometry of the DCL
For sample preparation appropriate amounts of stock solutions of
the dyes and the metal salts were mixed to give final concentrations
of: [MCB]tot = 50 mM, [AI]tot = 25 mM and [XO]tot = 12.5 mM;
[Ni2+]tot = [Cu2+]tot = 0.1 mM. NaOH(aq) (0.01 M) was then added
to adjust the pH to 8.4 ( 0.2).
Dye screening
For each dye, UV/Vis spectra of the free dye and the metal–dye
combinations (final conc.: [dye]tot = 50 mM; [M2+]tot = 0.1 mM) in
buffered aqueous solution (CHES, 0.1 M, pH 8.4) were recorded
after standing for 1 h at room temperature. The following dyes were
studied and not considered for further investigation due to precip-
itation with either one of the metal ions: Azophloxine, Methylene
Blue, Naphthol Blue Black. Orange G and Pyrocatechol Violet
were not suitable, as they decompose in the presence of one of
the metal ions. Methyl Orange and Methyl Red do not display
sufficient binding affinity towards the metal ions and Alizarin Red
S, Mordant Blue 9 and Mordant Blue 13 gave weak signals, when
tested in a dynamic combinatorial library.
Sensing experiments
The DCL sensors were prepared by mixing appropriate amounts
of stock solutions containing the dyes, the metal salts and the
buffer. After addition of either one peptide or a mixture of
both peptides, UV/Vis spectra were recorded at t = 2, 5, 10,
20, 40, 60 min and 24 h or t = 2, 5, 10 min and 24 h. Each
series of measurements was repeated five or six times. The final
concentrations were: [MCB]tot = 50 mM, [AI]tot = 25 mM and
[XO]tot = 12.5 mM, [Ni2+]tot = [Cu2+]tot = 0.1 mM, and [CHES]tot
=
0.1 M. The peptide concentration was varied in 0.1 eq. increments
with [angiotensin I]tot = (20 - x) mM and [angiotensin II]tot
=
x mM. The data was analyzed with the commercially available
statistics program SYSTAT (version 11.0) by a linear discriminant
analysis algorithm.
Spectrophotometric titrations
For titrations of Xylenol Orange with CuCl2·2H2O and
NiCl2·6H2O, two series of measurements were performed: one in
which solutions of [M2+]tot = 5 mM were added to solutions of
[XO]tot = 7.5 mM (3 mL, + CHES, 0.1 M, pH 8.4, 298 K) in 1 mL
increments, and one in which solutions of [M2+]tot = 1 mM were
added to solutions of [XO]tot = 15 mM (1.5 mL, + CHES, 0.1 M,
pH 8.4, 298 K) in 5 mL increments. For titrations of Arsenazo I
with CuCl2·2H2O and NiCl2·6H2O, solutions of [M2+]tot = 10 mM
were added to solutions of [AI]tot = 15 mM (3 mL, + CHES, 0.1 M,
pH 8.4, 298 K) in 1 mL increments, whereas for Methyl Calcein
Blue, solutions of [M2+]tot = 10 mM were added to solutions of
[MCB]tot = 25 mM (3 mL, + CHES, 0.1 M, pH 8.4, 298 K) in
1 mL increments. After each addition, solutions were equilibrated
for 10 min at 298 K before measuring the absorption spectra in
the range 300–700 nm (XO and AI) and 300–500 nm (MCB).
The speciation models described in the main text were fitted to
Acknowledgements
We would like to thank Dr Laure Menin for performing mass
spectrometry and Dr Geoffrey Wood for help with data treatment.
The work was supported by the Swiss National Science founda-
tion, by the COST action CM0703 on Systems Chemistry, and by
the EPFL.
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R
the spectral data using an in-house built routine in MATLABꢀ
which implements evolving factor analysis and a Newton–Gauss
multi-non-linear least squares fitting algorithm.13,14 For XO, the
speciation models were fitted to the data from both series of
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squares fit. In all cases the fits converged with sum-of-squared
4602 | Org. Biomol. Chem., 2009, 7, 4598–4603
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