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self-assembly of IAPP into b-sheet-rich amyloid fibrils by initial-
ly shifting the conformational equilibrium towards the a-helix,
without overly stabilising the helical motif. Considering that
oligomers are the most potent cytotoxic proteospecies,[6c] both
pathways will decrease the toxicity induced by the amyloido-
genic process of IAPP, either by blocking the formation of pre-
fibrillar assemblies (a-helix over-stabilisation) or by accelerating
the structural conversion of oligomers into less cytotoxic amy-
loid fibrils.
allows for several significant synthetic advantages. The pres-
ence of the heteroatom in thiophene introduces changes in re-
activity that allows convenient chemo- and regioselective path-
ways that are unavailable in the synthesis of terphenyl com-
pounds. Specifically, a five-membered heteroaromatic core
scaffold (Figure 1b, compound 2) affords a flexible synthetic
approach in which substituent modifications can be made in
a modular manner while avoiding the long synthetic routes
that have been used previously for the synthesis of
terphenyls.[14]
Miranker and Hamilton groups recently developed small
molecules targeting the transient helical state of IAPP in order
to inhibit lipid-catalysed aggregation.[11] These polycarboxylate
ligands were developed on pyridyl, quinoline or peptoid scaf-
folds and were shown to inhibit lipid-induced IAPP aggrega-
tion, but to strongly accelerate IAPP fibrillogenesis in lipid-free
conditions. Alternatively, other synthetic templates have been
shown to be attractive scaffolds towards interacting/stabilising
the a-helical region of proteins.[12] Functionalised terphenyls[13]
(compound 1) represent one such scaffold with a reported ap-
plication as a mimic of the a-helix side chain of smooth
muscle myosin light chain kinase (smMLCK) to disrupt its inter-
action with calmodulin (CaM; Figure 1a).[14]
The synthesis of diaryl substituted heteroaromatics has been
previously accomplished through various palladium catalysed
cross-coupling reactions. The predominant strategies involve
the utilisation of organometallic precursors and/or result in the
formation of symmetrically substituted heteroaromatics.[15b,16]
For example, palladium catalysed CꢀH activation reactions
have emerged as attractive methods for the formation of
carbonꢀcarbon bonds between heteroarenes and aryl halides
without the use of organometallic derivatives.[17] However, the
main limitation of CꢀH functionalisation of 3-substituted thio-
phenes is the formation of mixed arylated products at the C2
and C5 positions.[18] To avoid this limitation yet still take ad-
vantage of a CꢀH arylation strategy while controlling the re-
gioselectivity of the products, commercially available 3-substi-
tuted thiophene 2-carboxylic acids have been used in combi-
nation with decarboxylative cross-coupling. Decarboxylative
cross-coupling reactions have been developed as a powerful
method for the formation of carbonꢀcarbon bonds between
aliphatic and aromatic carboxylic acids and aryl or vinyl sub-
strates.[19] Decarboxylative arylation processes circumvent the
requirement of organometallic building blocks[20] offering read-
ily available, inexpensive and easy to use coupling partners. In
this view, we performed palladium catalysed decarboxylative
cross-coupling reaction of thiophene carboxylic acids and vari-
ous aryl bromides.[18b,21] The combination of both the CꢀH ary-
lation and decarboxylative cross-coupling reactions allows for
a short, modular pathway through which a large library of a-
helix mimetic compounds can be readily synthesised. In the
current work, the molecules produced by this approach were
tested as modulators of the formation of IAPP fibrils as
a proof-of-concept. However, the general synthetic route can
be used for the preparation of molecules tailored with differ-
ent side-chain residues to stabilise and/or interact with the a-
helix of other proteins for various applications.[22]
Figure 1. A) 3,2’,2’’-Tris-substituted terphenyl template (compound 1), B) 2,5-
diaryl substituted thiophene template (compound 2), C) ribbon representa-
tion of IAPP a-helix (PDB ID: 2KB8).[25]
Binding of ligands to the helical motif largely results from
the interaction of the ligand with the amino acid side chains
projecting on one face of the a-helix and spaced three or four
residues away from each other, referred to as i, i+4 and i+7
(Figure 1). In the transient helical conformation of IAPP com-
prising residues 8–19, residues Arg11, Phe15 and His18 are ori-
ented on one face of the a-helix[9a] and represent the key
motif that will be targeted to stabilise the transient a-helix of
IAPP (Figure 1c). As hypothesised from coiled coil motifs for-
mation, the presence of hydrophilic side chains (Arg, His) will
provide the specificity of interaction whereas the hydrophobic
residue Phe will contribute to the thermodynamic stability of
the interaction by hydrophobic core packing.
Results and Discussion
Two pathways have been envisaged for the preparation of 2,5-
diarylated thiophenes (2), differing only in the order of the two
different coupling reactions (Scheme 1). As illustrated in
Scheme 1, route A utilises C5-arylation of the substituted thio-
phene methyl ester 3a resulting in aryl-thiophene intermediate
4 followed by saponification to provide carboxylic acid 5. De-
carboxylative cross-coupling of acid 5 results in the formation
of the desired 2,5-diaryl substituted thiophene 2. Alternatively,
initial saponification of ester 3a in pathway B provides the
thiophene carboxylic acid intermediate 6 that can undergo de-
Relying on the bioisosterism of thiophene and benzene,[15]
we have designed a library of compounds related to the ter-
phenyl scaffold. The replacement of benzene with thiophene
Chem. Eur. J. 2014, 20, 2522 – 2528
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