S. Das et al. / Bioorg. Med. Chem. Lett. 24 (2014) 3238–3242
3239
metabolically liable ethoxy ether linker as identified by our metab-
olite identification (Met-ID) studies.7
N
Cl
OH
THPO
CHO
b
NH2
7
a
The problem of low metabolic stability was successfully
resolved by replacing the ethoxy ether linker with phenoxy ether
as in the case of compound 9d (Fig. 1), that resulted in high micro-
somal stability (83.1% and 85.2%) and 6-fold improvement in
potency to 19.1 nM. This lead compound was further optimized
to improve potency, selectivity and physicochemical properties
and the results are described in this Letter.
2
N
N
R
N
Me
N
O
8
Me
N
N
c
N
O
In our previous communication (Part 1), we had extensively
studied SAR of tricyclic PDE10A inhibitors based on pyrrolo[3,2-
b]quinolines and pyrido[2,3-b]indoles.7 Based on the SAR data we
focused on selected linker-modified derivatives of pyrrolo[3,2-
b]quinolines as shown in Schemes 1 and 2. The approach employed
for the synthesis of pyrrolo[3,2-b]quinoline linked compounds of
the formula 5a–e and 6 is outlined in Scheme 1. Condensation
reaction of 2-chloroquinolin-3-amine 28 with THP protected
2-(3-hydroxyphenyl)acetaldehyde 39 gave 1H-pyrrolo[3,2-b]quin-
oline,10 which on N-methylation followed by deprotection of THP
group afforded the desired 3-substituted phenol derivative 4. The
coupling reaction of 4 with appropriately substituted 2-chloropyr-
imidine gave aryl ethers 5a–e in 55–80% yield. Similarly, 4 was
coupled with 5-(3-chloropyrazin-2-yl)pyrimidine to give 6 in 62%
yield.
The inhibitory activity of compounds was measured using a
scintillation proximity assay with [3H]-cAMP as the substrate and
by measuring hydrolysis of cAMP to AMP using recombinant
human PDE10A enzyme and the results are shown in Table 1.11
From amongst the 1,3-disubstituted pyrimidine derivatives 5a–e,
compound 5a bearing a pyrazole ring at the 3-position showed
good PDE10A inhibition with a potency of 20.9 nM. The fluoro-
phenyl derivative 5b and the methoxyphenyl derivative 5c showed
nearly 5-fold loss in potency. Compounds 5d and 5e with pyrimi-
dine and morpholine substituent at 3-position showed a potency
of 18.2 and 29.2 nM, respectively. However, compound 6 with a
1,2-substitution around the central pyrazine core resulted in poor
potency.
Me
N
N
9a
, R = 4-fluorophenyl
N
9b, R = 4-methoxyphenyl
N
N
9c
, R = pyridin-4-yl
9d, R = pyrimidin-5-yl
10
Scheme 2. Reagents and condition: (a) (i) (t-Bu)3P.HBF4, Pd2(dba)3, KOAc, DMA,
120 °C, N2, 16 h, 37%, (ii) CH3I, NaH, DMF, 0 °C to rt, 1 h, 82%, (iii) Concd HCl, MeOH,
THF, 0 °C, 30 min, 62%; (b) 3-substituted-2-chloropyrazines, Cs2CO3, DMSO, 80 °C,
12 h, 48–75%; (c) 2-chloro-4,50-bipyrimidine, Cs2CO3, DMSO, 80 °C; 10 h, 52%.
the THP group afforded the desired 4-substituted phenol derivative
8. The coupling reaction of 8 with appropriate 2-chloro-3-substi-
tuted pyrazine gave 9a–d in 48–75% yield. Similarly, coupling reac-
tion of 8 with 2-chloro-4,50-bipyrimidine furnished 10 in moderate
yield.
The 1,2-disubstituted pyrazine derivatives 9a and 9b with aryl
substitution resulted in moderate potency of 177.2 and
153.1 nM, respectively. Introduction of a pyridine ring as in the
case of 9c and a pyrimidine ring as in the case of 9d resulted in
excellent potency of 8.5 and 19.1 nM, respectively. Compound 10
with a 1,3-substitution pattern around the central pyrimidine ring
resulted in moderate PDE10A potency (entry 11).
In order to understand the minimum structural requirement for
good PDE10A inhibition, we considered the replacement of the
tricyclic pyrrolo[3,2-b]quinoline moiety with the bicyclic pyrrolo
[3,2-b]pyridine in selected derivatives. The approach employed
for the synthesis of these compounds is depicted in Scheme 3. N-
methylation of 3-bromopyrrolo[3,2-b]pyridine 11a–c with methyl
iodide followed by Suzuki coupling with 4-hydroxyphenylboronic
acid gave the 4-hydroxyphenyl derivative 12a–c. Phenol deriva-
tives 12a and 12c were coupled with 2-chloro-3-(pyridin-4-yl)pyr-
azine to furnish the corresponding phenyl ethers 13a and 13b in
The synthesis of isomeric 4-substituted phenol derivative 8 and
its use in the synthesis of compounds 9a–d and 10 is shown in
Scheme 2. As described above, condensation of 2 with THP
protected 2-(4-hydroxyphenyl)acetaldehyde 79 gave 1H-pyrrol-
o[3,2-b]quinoline, which on N-methylation and deprotection of
OH
OH
CHO
N
Cl
THPO
N
Br
N
3
a
HO
N
B(OH)2
c
NH2
N
N
N
R
Me
N
2
4
H
a
N
R
11a, R = H
b
c
Me
12a, R = H
11b
N
, R = CH3
R
N
11c, R = Cl
12b
, R = CH3
N
N
N
12c, R = Cl
Me
N
O
O
b
N
O
N
Me
Me
N
N
N
N
O
N
N
N
5a, R = pyrazol-4-yl
Me
N
5b
, R = 4-fluorophenyl
R
5c, R = 4-methoxyphenyl
N
14a, R = H
5d
, R = pyrimidin-5-yl
6
14b
, R = CH3
13a
13b, R = Cl
5e, R = morpholin-1-yl
, R = H
R
14c, R = Cl
Scheme 1. Reagents and conditions: (a) (i) (t-Bu)3P.HBF4, Pd2(dba)3, KOAc, DMA,
120 °C, N2, 16 h, 44%, (ii) CH3I, NaH, DMF, 0 °C to rt, 1 h, 80%, (iii) Concd HCl, MeOH,
THF, 0 °C, 30 min, 65%; (b) 3-substituted 2-chloropyrimidines, Cs2CO3, DMSO, 80 °C,
12–16 h, 55–80%; (c) 5-(3-chloropyrazin-2-yl)pyrimidine, Cs2CO3, DMSO, 80 °C,
16 h, 62%.
Scheme 3. Reagents and conditions: (a) (i) CH3I, NaH, DMF, 0 °C to rt, 1 h, 66–85%,
(ii) 4-hydroxyphenylboronic acid, Pd(PPh3)4, K2CO3, DMF, water, 80 °C, N2, 12–16 h,
52–80%; (b) 2-chloro-3-(pyridin-4-yl)pyrazine, Cs2CO3, DMSO, 80 °C, 10 h, 58–70%,
(c) 2-fluoro-3,40-bipyridine, Cs2CO3, DMSO, 80 °C, 12 h, 55–65%.