Evaluation of AMPte-DL-F2Orn
J ournal of Medicinal Chemistry, 1996, Vol. 39, No. 13 2539
2 H), 4.51 (dt, J ) 5.6, 6.6 Hz, 1 H), 4.88 (br, 1 H), 5.13 (s, 2
H), 5.69 (d, J ) 7.3 Hz, 1 H), 7.2-7.4 (m, 5 H); 13C NMR
(CDCl3) δ 28.0 (3 C), 28.4 (3 C), 35.7 (t, J ) 23.3 Hz), 45.4 (t,
J ) 30.3 Hz), 50.2, 67.1, 80.6, 82.6, 122.4 (t, J ) 244 Hz), 128.2
(2 C), 128.3, 128.7 (2 C), 136.5, 155.9, 156.0, 170.1; 19F NMR
(CDCl3) δ -27.0 (ddq, J ) 9.5, 251, 11.8 Hz, 1 F), -25.4 (ddq,
J ) 7.4, 251, 13.2 Hz, 1 F); MS (CI) m/e (rel intensity) 459
(MH+, 24.8), 420 (27.2), 403 (30.2), 393 (26.3), 364 (100), 347
(53.4), 303 (99.0); HRMS (CI) m/e calcd for C22H32F2N2O6H
(MH+) 459.2307, found 459.2322. Anal. (C22H32F2N2O6‚0.5H2O)
C, H, N.
122.6 (t, J ) 244 Hz), 129.2 (2 C), 152.3, 156.1, 167.2, 170.6;
19F NMR (CDCl3) δ -23.9 (dtt, J ) 251, 12.6, 17.9 Hz, 1 F),
-26.7 (ddq, J ) 251, 19.3, 13.3 Hz, 1 F); MS (EI) m/e (rel
intensity) 457 (M+, 5.5), 383 (2.1), 328 (5.9), 300 (6.1), 134
(100); HRMS (EI) m/e calcd for C22H33F2N3O5 (M+) 457.2388,
found 457.2391.
N2-(4-Am in o-4-d eoxy-10-m eth ylp ter oyl)-DL-4,4-d iflu o-
r oor n ith in e (4). 6-(Bromomethyl)-2,4-pteridinediamine hy-
drobromide18 (35 mg, 0.09 mmol) was added to a solution of
11 (40 mg, 0.09 mmol) in dry DMAC (1.0 mL) at 0 °C, and the
mixture was stirred at 55 °C for 6 h. After additional stirring
(6 days) at ambient temperature, the solvent was removed by
evaporation, and the resulting yellow oil was dissolved in a
minimum amount of CH2Cl2/MeOH (20/1) and passed through
a short silica gel column (CH2Cl2/MeOH, 20/1) to remove polar
impurities. The purified di-tert-butyl ester was then dissolved
in trifluoroacetic acid (2 mL), and the resulting solution was
stirred at ambient temperature for 40 min. The reaction
mixture was poured into dry ether (10 mL); the resulting
precipitate was isolated by filtration and dried to give 28 mg
of 4 (44%) as a bright-yellow solid: Rf 0.64 (EtOH/concentrated
NH4OH, 4/1); 1H NMR (CD3OD) δ 2.6-3.0 (m, 2 H), 3.27 (s, 3
H), 3.4-3.7 (m, 2 H), 4.8-5.0 (m, 1 H), 6.85 (d, J ) 8.2 Hz, 2
H), 7.75 (d, J ) 7.9 Hz, 2 H), 8.63 (s, 1 H); 13C NMR (CD3OD)
δ 37.3 (t, J ) 22.8 Hz), 39.9, 44.5 (t, J ) 25.2 Hz), 48.7, 56.7,
112.8 (2 C), 122.1 (t, J ) 244 Hz), 122.6, 123.5, 130.4 (2 C),
147.0, 150.5, 153.2, 153.8, 157.9, 165.0, 170.0, 173.9; 19F NMR
(CD3OD) δ -29.0 (dm, J ) 245 Hz, 1 F), -27.8 (dm, J ) 245
Hz, 1 F); UV λmax (pH ) 13) 258, 303, 371; MS (FAB+) m/e (rel
intensity) 476 (MH+, 71.2), 308 (40.8), 176 (100), 103 (91.7);
HRMS (FAB+) m/e calcd for C20H23F2N9O3H (MH+) 476.1970,
found 476.1954. Anal. (C20H23F2N9O3‚2CF3COOH‚H2O) C, H;
N 5-[(1,1-Dim e t h yle t h oxy)ca r b on yl]-DL-4,4-d iflu or o-
or n ith in e, ter t-Bu tyl Ester (9). To a solution of 8 (230 mg,
0.50 mmol) in dry ethanol (10 mL) was added 10% Pd/C (20
mg), and the mixture was shaken under H2 (50 psi) for 11 h.
Catalyst was removed by filtration, and the filtrate was
concentrated. The resulting residue was purified by column
chromatography (hexane/EtOAc, 1/1) to give 142 mg (87%
yield) of 9 as a colorless oil: Rf 0.21 (hexane/EtOAc, 1/2); IR
1
(neat) 3386, 2984, 2934, 1727 cm-1; H NMR (CDCl3) δ 1.40
(s, 9 H), 1.42 (s, 9 H), 1.63 (br, 2 H), 2.02 (ddt, J ) 8.5, 18.6,
15.4 Hz, 1 H), 2.33 (dddd, J ) 4.1, 12.0, 14.6, 20.6 Hz, 1 H),
3.3-3.6 (m, 3 H), 5.28 (br, 1 H); 13C NMR (CDCl3) δ 28.1 (3
C), 28.5 (3 C), 39.1 (t, J ) 24.1 Hz), 45.5 (t, J ) 29.9 Hz), 50.6,
60.5, 65.9, 80.1, 81.8, 122.6 (t, J ) 243 Hz), 155.7, 173.6; 19F
NMR (CDCl3) δ -27.2 (ddq, J ) 13.3, 250, 19.3 Hz, 1 F), -24.3
(dp, J ) 250, 14.6 Hz, 1 F); MS (CI) m/e (rel intensity) 325
(MH+, 100), 269 (63.3), 251 (7.8), 225 (8.9), 213 (40.7); HRMS
(CI) m/e calcd for C14H26F2N2O4H (MH+) 325.1939, found
325.1934. Anal. (C14H26F2N2O4) C, H, N.
N2-[4-[[(Ben zyloxy)ca r b on yl]m et h yla m in o]b en zoyl]-
N5-[(1,1-d im et h ylet h oxy)ca r b on yl]-DL-4,4-d iflu or oor n i-
th in e, ter t-Bu tyl Ester (10). To a solution of 4-[[(benzyloxy)-
carbonyl]methylamino]benzoic acid20 (122 mg, 0.43 mmol) in
dry DMF (3 mL) were added DCC (121 mg, 0.59 mmol) and
HOBt (105 mg, 0.78 mmol) at 0 °C, and the mixture was
stirred at ambient temperature for 10 min. A solution of 9
(127 mg, 0.39 mmol) was then added to that mixture at 0 °C,
and the mixture was stirred, at ambient temperature for 14 h
(white solid appeared). The reaction mixture was filtered and
the solvent (DMF) was removed under reduced pressure. The
resulting crude oil was dissolved in a small volume of hexane/
EtOAc, 1/1 (7 mL), and again filtered. The filtrate was
evaporated, and the resulting oil was purified by silica gel
chromatography (hexane/EtOAc, 4/1) to give 215 mg (93%
yield) of the product 10 as a colorless oil; Rf 0.55 (hexane/
N: calcd, 17.47; found, 17.94. Reversed-phase HPLC:21 tR
26.2 min.
)
Bioch em ica l Tech n iqu es: Cell Lin es. The human T-
lymphoblastic leukemia cell line CCRF-CEM22 the primary
screen for drug effects and was the source of tumor enzymes.
Routine culture of these lines was as described.23 CCRF-CEM
was verified to be negative for mycoplasma contamination
during the course of these studies using the GenProbe test
kit.
En zym es a n d Assa ys: FPGS and DHFR from CCRF-CEM
cells22 were partially purified as described.24 The FPGS assay
method25 uses [3H]Glu to radiolabel polyglutamates of a folate-
like substrate during incubation with the enzyme. The
reaction mixture is applied to a DEAE-cellulose minicolumn
that is washed with a buffered-NaCl solution to remove
unligated [3H]Glu. [3H]Polyglutamate products are retained
on the minicolumn during the wash and are then eluted
quantitatively with acid. CCRF-CEM FPGS assay conditions26
were modified to include 50 µg of protease-free bovine serum
albumin (Miles). All reagents were made with freshly pro-
cessed deionized water, stored frozen in aliquots, and used in
only 1-2 experiments to avoid absorption of atmospheric CO2
which can lead to erroneous FPGS kinetic constants.26 DHFR
activity was assayed spectrophotometrically as described.27
Standard assays contained 100 mM Tris-HCl, pH 7.0, 150 mM
KCl, 20 µM dihydrofolate, 20 mM 2-mercaptoethanol, and 50
µM NADPH. Inhibitory potency was measured by adding
increasing concentrations of an antifolate to standard FPGS
or DHFR assays and measuring the remaining activity.
EtOAc, 1/1); IR (neat) 3346, 2981, 2931, 1736, 1652, 1610 cm-1
;
1H NMR (CDCl3) δ 1.45 (s, 9 H), 1.47 (s, 9 H), 2.4-2.7 (m, 2
H), 3.34 (s, 3 H), 3.3-3.8 (m, 2 H), 4.88 (dt, J ) 4.6, 7.4 Hz, 1
H), 5.07 (t, J ) 6.5 Hz, 1 H), 5.17 (s, 2 H), 7.2-7.4 (m, 7 H),
7.27 (d, J ) 7.4 Hz, 1 H), 7.86 (d, J ) 8.4 Hz, 2 H); 13C NMR
(CDCl3) δ 28.0 (3 C), 28.4 (3 C), 34.9 (t, J ) 24.5 Hz), 37.5,
45.3 (t, J ) 30.7 Hz), 49.2, 67.7, 80.7, 82.8, 122.4 (t, J ) 244
Hz), 125.1 (2 C), 128.0 (2 C), 128.1, 128.2 (2 C), 128.6 (2 C),
131.0, 136.4, 146.3, 155.2, 156.2, 166.5, 170.2; 19F NMR (CDCl3)
δ -27.0 (dm, J ) 252 Hz, 1 F), -22.9 (dm, J ) 252 Hz, 1 F);
MS (EI) m/e (rel intensity) 591 (M+, 0.9), 518 (0.6), 462 (4.9),
434 (9.8), 285 (34.3), 268 (36.0), 91 (100); HRMS (EI) m/e calcd
for C30H39F2N3O7 (M+) 591.2756, found 591.2757. Anal.
(C30H39F2N3O7‚0.5H2O) C, H, N.
N5-[(1,1-Dim eth yleth oxy)ca r bon yl]-N2-[4-(m eth yla m i-
n o)b en zoyl]-DL-4,4-d iflu or oor n it h in e, ter t-Bu t yl E st er
(11). Palladium hydroxide on carbon (19 mg) was added to a
solution of 10 (147 mg, 0.25 mmol) in dry ethanol (7 mL), and
the mixture was shaken under H2 (40 psi) for 8 h (Parr
hydrogenator). The mixture was filtered, and the filtrate was
evaporated to dryness. The crude product was purified by
silica gel chromatography (hexane/EtOAc, 4/1) to give 99 mg
of 11 (88%) as a colorless oil: Rf 0.38 (hexane/EtOAc, 1/1); IR
Ack n ow led gm en t. This research was supported by
grants from the National Cancer Institute, CA28097
(J .K.C.), CA43500 (J .J .M.), and CA16056 (J .J .M.). We
thank Scott N. VanderWel and Robert N. Sibley for the
synthesis of key intermediates. We thank Ms. Carol
Capelle for careful preparation of the manuscript.
(neat) 3360, 2931, 1729, 1645, 1609, 1518 cm-1 1H NMR
;
(CDCl3) δ 1.45 (s, 9 H), 1.47 (s, 9 H), 2.4-2.7 (m, 2 H), 2.86 (s,
3 H), 3.4-3.7 (m, 2 H), 4.1-4.4 (br, 1 H), 4.88 (dt, J ) 5.0, 7.1
Hz, 1 H), 5.00 (t, J ) 6.2 Hz, 1 H), 6.56 (d, J ) 8.6 Hz, 2 H),
7.10 (d, J ) 7.5 Hz, 1 H), 7.72 (d, J ) 8.6 Hz, 2 H); 13C NMR
(CDCl3) δ 28.0 (3 C), 28.4 (3 C), 30.4, 35.5 (t, J ) 23.9 Hz),
45.4 (t, J ) 30.3 Hz), 48.9, 60.6, 80.6, 82.6, 111.5 (2 C), 121.9,
Su p p or tin g In for m a tion Ava ila ble: Details of DAST-
mediated difluorination of 4-oxoornithine derivatives (1 page).
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