Journal of the American Chemical Society
Article
reagents and chemicals were AR grade and used without further
purification unless otherwise noted. CH2Cl2 and CHCl3 were distilled
from CaH2 under nitrogen. Escherichia coli ATCC 25922, S. aureus
ATCC 6538, Staphylococcus epidermidis ATCC 12228, Klebsiella
pneumoniae AS1.1736, and Pseudomonas aeruginosa AS1.2031 were
purchased from Antibacterial Material Testing Center of Technique
Institute of Physics and Chemistry, Chinese Academy of Sciences.
Syntheses of Sensor Probes and Model Polymers. The
synthetic routes of CPT1-A, CPT1-B, CPT1-C, and model polymers
PT1 and PT2 were outlined in Scheme 1, and the details were
described below.
residue was purified by column chromatography (eluent: CH2Cl2/
CH3OH = 12:1) to give compound 4 (0.3 g, yield 75%) as a colorless
solid. 1H NMR (400 MHz, CDCl3, TMS, ppm): δ 0.86−0.89 (t, 3H),
1.23−1.33 (m, 18H), 1.80 (m, 2H), 3.31 (s, 6H), 3.51−3.56 (m, 2H),
5.14 (s, 2H), 7.35−7.36 (d, J = 5 Hz, 1H), 7.39−7.41 (d, J = 8 Hz,
1H), 7.49 (s, 1H), 7.61−7.63 (d, J = 8 Hz, 2H), 7.69−7.70 (d, J = 8
Hz, 2H). 13C NMR (100 MHz, CDCl3, TMS, ppm): δ 14.1, 22.7, 23.0,
26.4, 29.3, 29.5, 29.6, 31.9, 49.6, 63.8, 67.2, 121.7, 126.0, 126.8, 126.9,
133.9, 137.9, 140.8. MALDI-TOF Mass spectrum m/z: Calculated:
386.29; Found: 386.13.
General Syntheses of Polythiophenes. All polymers in this
paper were prepared via an oxidative polymerization under nitrogen in
the presence of FeCl3. The general method for preparation of
polythiophenes was carried out as follows: 4 equiv of FeCl3 was
dissolved in 30 mL of dry CHCl3 under nitrogen, and then 1 equiv of
corresponding monomers dissolved in 20 mL of CHCl3 was added
dropwise. The reaction mixture was stirred at room temperature for 2
days. The resulting precipitate was collected, washed with methanol,
and finally dried under vacuum to give the desired polymers as a dark
red solid. For the copolymerization, monomer 4 and 2 with different
mole ratios (1/1, 1/2.5, and 2.5/1) were used to give the
corresponding copolythiophenes (CPT1-A, CPT1-B, and CPT1-C,
respectively). The polymerization of monomer 2 and 4 gives the
corresponding homopolythiophenes PT1 and PT2, respectively.
CPT1-A (Yield: 22%) Gel-Permeation Chromatography Analysis
(GPC). Mn = 9.789 × 104, polydispersity index (PDI = 1.100) 1H NMR
(400 Mz, CD3CN-D2O (v/v = 1/1), TMS, ppm) δ 0.68 (s, br), 1.07
(s, br), 1.28 (s, br), 1.59 (br), 2.85 (s, br), 2.99 (s, br), 3.24 (dbr), 3.46
(br), 3.53 (br), 3.84 (s, br), 4.23 (br), 4.44 (br), 6.80 (s, br), 7.22 (br),
7.36 (s, br). 7.49 (s, br).
6-Bromohexyl-2-(thiophen-3-yl)acetate (Compound 1). 6-
bromo-1-hexanol (0.362 g, 2 mmol) was added slowly with syringe to
a mixture of 1-(3-dimethylaminopropyl)-3-ethylcarbodiimide hydro-
chloride (0.5 g, 2.6 mmol), 4-(dimethylamino)pyridine (70 mg, 0.6
mmol) and 3-thiopheneacetic acid (0.284 g 2 mmol) in 40 mL of dry
CH2Cl2 under nitrogen. The mixture was stirred at room temperature
for 12 h to complete the reaction. The solution was washed with H2O
(3 × 20 mL) and the organic layer was dried with anhydrous MgSO4.
After removal of the solvent under reduced pressure, the residue was
purified by column chromatography (eluent: petroleum ether/ethyl
acetate = 5:1) to give compound 1 (0.45 g, yield 74%) as a colorless
1
liquid. H NMR (400 MHz, CDCl3, TMS, ppm): δ 1.34−1.36 (m,
2H), 1.43−1.46 (m, 2H), 1.60−1.66 (m, 2H), 1.83−1.86 (m, 2H),
3.37−3.41 (t, J = 13 Hz, 2H), 3.65 (s, 2H), 4.09−4.12 (t, J = 13 Hz,
2H), 7.03−7.05 (d, J = 6 Hz, 1H), 7.14−7.15 (t, 1H), 7.26−7.29 (m, J
= 13 Hz, 1H). 13C NMR (100 MHz, CDCl3, TMS, ppm): δ 25.1, 27.8,
28.5, 32.6, 33.7, 36.0, 64.8, 122.8, 125.7, 128.5, 133.8, 171.2. EI Mass
spectrum m/z: Calculated: 306.01 (100%), 304.01 (98.2%); Found:
306.01, 304.01.
1
CPT1-B (Yield: 33%) GPC. Mn = 1.003 × 105 (PDI = 1.007). H
1-(6-(2-(Thiophen-3-yl)acetoxy)hexyl)-4-aza-1-azonia-
bicyclo[2.2.2]octane Bromide (Compound 2). 1,4-Diazabicyclo-
[2.2.2]octane (0.2 g, 1.8 mmol) was dissolved in 50 mL of ethyl
acetate with the subsequent addition of intermediate 1 (0.3 g, 1
mmol). The mixture was stirred at room temperature for 36 h to
complete the reaction. The resulting white precipitation was collected,
washed with ethyl acetate, and dried in vacuum to give compound 2 as
a white solid (0.25 g, yield 60%). 1H NMR (400 MHz, CD3OD TMS,
ppm): δ 1.35−1.46 (m, 4H), 1.64−1.70 (m, 2H), 1.71−1.77 (m, 2H),
3.18−3.25 (m, 8H), 3.30−3.36 (m, 6H), 3.67 (s, 2H), 4.11−4.14 (t, J
= 13 Hz, 2H), 7.03−7.05 (d, J = 5 Hz, 1H), 7.22−7.23 (m, 1H), 7.36−
7.38 (d, J = 8 Hz, 1H). 13C NMR (100 MHz, CD3OD, TMS, ppm): δ
22.7, 26.4, 26.9, 29.3, 36.4, 46.1, 53.4, 65.5, 65.7, 123.9, 126.7, 129.7,
135.4, 173.0. MALDI-TOF Mass spectrum m/z: Calculated: 337.19;
Found: 337.03.
N-(4-Bromobenzyl)-N,N-dimethyldodecan-1-aminium Bro-
mide (Compound 3). 4-Bromobenzyl bromide (0.25 g, 1 mmol)
was dissolved in 20 mL of CH2Cl2/CH3OH (v/v = 3/2) with the
subsequent addition of N,N-dimethyldodecylamine (0.4 mL, 1.3
mmol). The mixture was stirred at room temperature for 12 h. After
the reaction was completed, the reaction solution was concentrated to
5 mL. The residue was poured into 200 mL of absolute diethyl ether
under stirring and then filtered. The precipitate was filtered, washed
with absolute diethyl ether and dried to give compound 3 (0.43 g,
yield 92%) as a white solid. 1H NMR (400 MHz, CDCl3, TMS, ppm):
δ 0.82−0.87 (t, 3H), 1.21−1.26 (m, 18H), 1.75 (m, 2H), 3.24−3.26
(s, 6H), 3.48−3.52 (m, 2H), 5.17−5.21 (s, 2H), 7.49−7.51(d, J = 8
Hz, 2H), 7.58−7.60 (d, J = 8 Hz, 2H). 13C NMR (100 MHz, CDCl3,
TMS, ppm): δ 13.8, 22.4, 22.7, 26.1, 29.0, 29.1, 29.3, 31.6, 49.2, 63.7,
66.1, 125.2, 126.3, 132.1, 134.7. MALDI-TOF Mass spectrum m/z:
Calculated: 382.21 (100%), 384.20 (97.4%); Found: 382.27, 384.29.
N,N-Dimethyl-N′-(4-(thiophen-3-yl)benzyl)dodecan-1-ami-
nium Bromide (Compound 4). Deionized water (10 mL) was
added with syringes to a mixture of compound 3 (0.4 g, 0.86 mmol),
Na2CO3 (0.5 g, 4.7 mmol), Pd(PPh3)4 (200 mg, 0.17 mmol), and
thiophene-3-boronic acid (0.128 g, 1 mmol) in EtOH (20 mL) under
nitrogen. After refluxing at 90 °C for 6 h, EtOH was removed under
reduced pressure. The residue was extracted with CH2Cl2 (3 × 20 mL)
and the resulting organic layer was collected and dried with anhydrous
MgSO4. After removal of the solvent under reduced pressure, the
NMR (400 Mz, CD3CN-D2O (v/v = 1/1), TMS, ppm) δ 0.69 (s, br),
1.08 (s, br), 1.30 (s, br), 1.57−1.68 (dbr), 2.99 (s, br), 3.36 (s, br),
3.54 (s, br), 3.66−3.67 (dbr), 4.03 (br), 4.32 (br), 6.99 (s, br), 7.18 (s,
br), 7.34 (s, br).
1
CPT1-C (Yield: 28%) GPC. Mn = 1.061 × 105 (PDI = 1.160). H
NMR (400 Mz, CD3CN-D2O (v/v = 1/1), TMS, ppm) δ 0.68 (s, br),
1.05 (s, br), 1.59 (s, br), 2.85 (s, br), 2.99 (s, br), 3.29 (s, br), 3.50−
3.59 (dbr), 4.23 (s, br), 4.45 (s, br), 6.80 (s, br), 7.35 (s, br), 7.49 (s,
br).
PT1 (yield: 55.6%) GPC. Mn = 1.643 × 105 (PDI = 1.233). 1H NMR
(400 Mz, CD3CN-D2O (v/v = 1/1), TMS, ppm) δ 1.14 (br), 1.30 (s,
br), 1.59−1.69 (dbr), 3.46 (s,br), 4.24 (s, br), 7.21, (s, br).
PT2 (yield: 50.0%) GPC. Mn = 6.655 × 104 (PDI = 1.161). 1H NMR
(400 Mz, CD3CN-D2O (v/v = 1/1), TMS, ppm) δ 0.67−0.69 (br),
1.06 (s,br), 1.60 (s, br), 2.85 (s, br), 3.00 (s, br), 4.56 (s, br), 6.81 (s,
br), 7.35−7.37 (dbr), 7.48−7.50 (dbr).
Fluorescent Spectra of CPT1-C with Different Bacteria. Five
kinds of freshly diluted bacteria (C = 108 cfu/mL) were incubated with
CPT1-C (70 μM, TBS, pH 7.4) for 5 min, and then the bacterial
suspensions were used for fluorescence test in a Hitachi F-4500
fluorescence spectrometer with an excitation at 460 nm.
Bacteria Imaging. Fluorescence imaging of bacteria (E. coli, K.
pneumoniae, and P. aeruginosa) was performed with an NIKON-SIM
confocal laser scanning microscopy using the light source at 561 nm
for excitation. A 100-oil-immersion objective lens was used. Freshly
diluted E. coli, K. pneumoniae, and P.aeruginosa were cultured in the
media in the presence of CPT1-C at 70 μM, (TBS buffer solution, pH
7.4). The bacteria were collected by centrifugation at 9,000 rap for 10
min, rinsed with TBS (pH 7.4), and then resuspended in TBS solution
(1 mL). The bacteria suspensions were dropped into a cover glass for
fluorescence imaging.
RESULTS AND DISCUSSION
■
Molecular Structures of LPS and LTA. LPS and LTA are
major constituents of the cell membranes of Gram-negative
bacteria and Gram-positive bacteria, respectively. To discrim-
inate the Gram-negative bacteria from Gram-positive bacteria, it
is necessary to clearly understand the molecular structures of
6687
dx.doi.org/10.1021/ja211570a | J. Am. Chem. Soc. 2012, 134, 6685−6694