Erratum: Tripod amphiphiles for membrane protein manipulation (Molecular BioSystems (2010) 6 (89-94) DOI: 10.1039/B915162C)

Full text of DOI:10.1039/C3MB90040A

Molecular
BioSystems
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ADDITIONS & CORRECTIONS
Reconstruction and analysis of the genome-scale metabolic network of
Candida glabrata
Nan Xu, Liming Liu, Wei Zou, Jie Liu, Qiang Hua and Jian Chen
Mol. BioSyst., 2013, 9, 205–216 (DOI: 10.1039/C2MB25311A). Amendment published 12th December 2012.
The authors would also like to acknowledge that this work was supported by the Open Funding Project of the State Key Laboratory
of Bioreactor Engineering.
Target identification of small molecules based on chemical biology
approaches
Yushi Futamura, Makoto Muroi and Hiroyuki Osada
Mol. BioSyst., 2013, 9, 897–914 (DOI: 10.1039/C2MB25468A). Amendment published 30th January 2013.
Corrections:
1. The sentence on page 6 of the article which reads, ‘With this method, the authors identified HSP60 as a target protein of
benzopyran derivatives.’ should read ‘With this method, the authors identified tubulin as a target protein of benzopyran derivatives.’
2. There are several corrections required in Table 1, row 3, regarding the innovative method ‘FITGE’.
a. In the column titled ‘Examples of drug target identification’, ‘HSP60 for benzopyran derivatives’ should read ‘Tubulin for
benzopyran derivatives’.
b. In the column titled ‘Direct Identification’, ‘Y/N’ should read ‘Y’.
c. In the ‘Advantage’ column, another advantage of FITGE that should be listed is ‘Potential to identify protein–protein interaction’.
d. In the ‘Disadvantage’ column, the statement ‘Difficult to identify low-abundance proteins’ should be ignored.
Switching p53 states by calcium: dynamics and interaction of stress
systems
Md. Jahoor Alam, Gurumayum Reenaroy Devi, Ravins, Romana Ishrat, Subhash M. Agarwalb and
R. K. Brojen Singh
Mol. BioSyst., 2013, 9, 508–521 (DOI: 10.1039/C3MB25277A). Amendment published 7th February 2013.
The reference citations in rows 1–18 of Table 2 in the main manuscript are incorrect. Please see rows 1–18 of Table 2 below for the
correct reference citations.
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Additions & Corrections
Carbohydrate-containing Triton X-100 analogues for membrane protein
solubilization and stabilization
Pil Seok Chae, Marc J. Wander, Kyung Ho Cho, Philip D. Laible and Samuel H. Gellman
Mol. BioSyst., 2013, 9, 626–629 (DOI: 10.1039/C3MB25584K). Amendment published 12th March 2013.
There were errors in the structures of the amphiphiles in Fig. 1 and the graphical abstract image. The L-sugar was drawn instead of
the correct D-sugar. The corrected structures are provided below:
Fig. 1 Chemical structures of new amphiphiles (CGT-1, CGT-2 and CGT-3) and Triton X-100.
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Molecular BioSystems
Graphical abstract
Tripod amphiphiles for membrane protein manipulation
Pil Seok Chae, Philip D. Laible and Samuel H. Gellman
Mol. BioSyst., 2010, 6, 89–94 (DOI: 10.1039/B915162C). Amendment published 12th March 2013.
There were errors in the chemical structures in Fig. 1, 3 and 5, compound 7 and the graphical abstract image. The L-sugars were
drawn instead of the correct D-sugars. The corrected structures are provided below:
Fig. 1 Chemical structures of representative classical detergents (LDAO, DDM) and selected non-classical amphiphiles (CHAPS, tween detergents, deoxycholate-
based amphiphile, amphipol (A8-35; n E 80), and LPD).
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Fig. 3 Modular synthesis of tripod amphiphiles: (a) CH2(CN)2, AcOH, NH4OAc, benzene, reflux; (b) PhMgBr, CuCN, THF, 0 1C; (c) KOH, ethylene glycol, reflux;
(d) EDCÁHCl, HOBt, 3-(dimethylamino)-1-propylamine, DMF, then m-CPBA, CHCl3; (e) EDCÁHCl, HOBt, serinol, DMF; (f) AgOTf, 2,3,4,6-tetra-O-benzoyl-a-D-glucopyranosyl
bromide, DCM, then NaOMe, MeOH; (e) EDCÁHCl, HOBt, ethanolamine, DMF; (h) 1,2-trans-peracetylated maltose, BF3ÁEt2O, DCM, then NaOMe, MeOH.
Fig. 5 Tripod amphiphiles with variations in the hydrophobic portion relative to 2. These amphiphiles are inferior to 2 for R. capsulatus LHI–RC superassembly
solubilization.
Compound 7
Graphical abstract
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Molecular BioSystems
A Boolean view separates platelet activatory and inhibitory signalling as
verified by phosphorylation monitoring including threshold behaviour
and integrin modulation
Marcel Mischnik, Desislava Boyanova, Katharina Hubertus, Jorg Geiger, Nicole Philippi, Marcus Dittrich,
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Gaby Wangorsch, Jens Timmer and Thomas Dandekar
Mol. BioSyst., 2013, 9, 1326–1339 (DOI: 10.1039/C3MB25597B). Amendment published 1st May 2013.
There was an error in Fig. 2, the subfigures were incorrectly labelled and therefore did not correspond to the references in the
caption and the manuscript text. The corrected figure is provided below:
Fig. 2 (A–D) Different system states after logical steady state computation. Successively added network functions coalesce into a fully activated system. (A) t0.
Included are solely reactions evoked by pure GPVI signalling. (B) t1. Effects from autocrine ADP signalling are added. (C) t2. Signalling complemented by storeoperated-
calcium-entry (SOCE). (D) t3. Addition of the positive feedback loop established by integrin signalling results in a maximally engaged system. Activation levels are
colour-coded (0 to 5; cellNetAnalyzer simulation).
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Molecular BioSystems
Additions & Corrections
Integrative quantitation enables a comprehensive proteome comparison
of two Mycoplasma pneumoniae genetic perturbations
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Eva Borras, Guadalupe Espadas, Francesco M. Mancuso, Tobias Maier, Cristina Chivaa and Eduard Sabido
Mol. BioSyst., 2013, 9, 1249–1256 (DOI: 10.1039/C3MB25581F). Amendment published 29th May 2013.
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The authors would like to acknowledge Prof. Jorg Stu¨lke (Gottingen University, Germany) for providing the mutant M. pneumoniae
strains used in this study.
Combining small molecules for cell reprogramming through an
interatomic analysis
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Bruno Cesar Feltes and Diego Bonatto
Mol. BioSyst., 2013, 9, 2471–2763 (DOI: 10.1039/C3MB70159J). Amendment published 12th September 2013.
The Acknowledgements section was missing from the manuscript. The authors would like to add the following acknowledgements:
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This work was supported by research grants from the Conselho Nacional de Desenvolvimento Cientıfico e tecnologico (CNPq; grant no.
ˆ
474117/2010-3), the Programa Institutos Nacionais de Ciencia e Tecnologia (INCT de Processos Redox em Biomedicina-REDOXOMA;
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grant no. 573530/2008-4), Fundaçao de mparo a Pesquisa do Rio Grande do Sul FAPERGS (PRONEM grant no. 11/2072-2), and the
Programa de Terapia Celular – CAPES (PROBITEC-CAPEs; grant no. 004/12).
The Royal Society of Chemistry apologises for these errors and any consequent inconvenience to authors and readers.
Additions and corrections can be viewed online by accessing the original article to which they apply.
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