Synthesis of Amarogentin Components
J ournal of Natural Products, 2000, Vol. 63, No. 3 373
× 100 mL). The ether layer was dried over Na2SO4 and then
evaporated. The residue was chromatographed by column
chromatography (CC) over Si gel eluting with hexane/ether
(5:1) to afford 2 (5.0 g, 17 mmol, 31%): UV (CHCl3) λmax (log
ꢀ) 241 (4.27), 264 (4.17), 305 (3.95) nm; IR (KBr) νmax 3320,
(3.80) nm; IR (KBr) νmax 3424, 3063, 3030, 2925, 2867, 1697,
1599, 1574, 1496, 1454, 1377, 1340, 1285, 1247, 1167, 1026,
736, 696 cm-1; 1H NMR (CD3OD, 360 MHz) δ 7.25-7.10 (15H,
m, aromatic H of benzyl groups), 7.06 (1H, dd, J ) 8.0, 8.0
Hz, H-5′), 6.88 (1H, d, J ) 2.0 Hz, H-2′), 6.82 (1H, d, J ) 8.0
Hz, H-4′), 6.76 (1H, dd, J ) 8.0, 2.0 Hz, H-6′), 6.49 (1H, d, J )
2.0 Hz, H-6), 6.35 (1H, d, J ) 2.0 Hz, H-4), 4.92, 4.83, 4.82
(each 2H, s, -CH2- of benzyl groups); 13C NMR (CD3OD, 90
MHz) δ 172.1 (C-7), 161.5 (C-5), 160.1 (C-3), 158.0 (C-3′), 142.9
(C-1), 138.2 (C-1′), 130.4 (C-5′), 129.5-128.0 (aromatic carbons
of benzyl groups), 122.1 (C-6′), 115.9 (C-2′), 115.5 (C-4′), 109.0
(C-6), 100.8 (C-2, 4), 71.5, 71.2, 71.0 (3 × -CH2- of benzyl
groups); CIMS m/z 517 [M + 1]+ (73), 426 (22), 383 (18), 293
(9), 203 (7), 112 (100); HREIMS m/z 516.1945 (calcd for
1642, 1570, 1453, 1241 cm-1 1H NMR (CDCl3, 360 MHz) δ
;
7.22 (1H, dd, J ) 8.0, 8.0 Hz, H-5′), 6.87 (1H, br d, J ) 8.0 Hz,
H-6′), 6.76 (1H, br d, J ) 1.8, 8.0 Hz, H-4′), 6.75 (1H, br s,
H-2′), 6.41 (1H, d, J ) 1.8 Hz, H-6), 6.28 (1H, d, J ) 1.8 Hz,
H-4), 3.92 (2H, q, -OCH2CH3), 3.80 (3H, s, -OMe), 1.27 (3H,
t, -OCH2CH3); 13C NMR (CDCl3, 90 MHz) δ 170.7 (C-7), 161.9
(C-3′), 159.0 (C-5), 156.6 (C-3), 147.2 (C-1), 144.2 (C-1′), 128.5
(C-5′), 120.7 (C-6′), 113.6 (C-2′), 112.5 (C-4′), 111.0 (C-6), 107.6
(C-2), 102.4 (C-4), 60.7 (-OCH2CH3), 55.3 (-OCH3), 13.0
(-OCH2CH3); CIMS m/z 289 [M + 1]+ (100), 243 (9); HREIMS
m/z 288.1004 (calcd for C16H16O5, 288.0998).
C
34H28O5, 516.1937).
3,3′,5-Tr ih yd r oxybip h en yl-2-ca r boxylic Acid (6). To a
3,3′,5-Tr ih yd r oxybip h en yl-2-ca r boxylic Acid Eth yl Es-
ter (3). Compound 2 (2.0 g, 7 mmol) was dissolved in dry
CH2Cl2 (150 mL) and chilled to -10 °C. Then, 1.0 M BBr3 in
CH2Cl2 (35 mL) was added dropwise. The mixture was stirred
overnight, beginning at 0 °C and gradually increasing to room
temperature. Small pieces of ice were added and the mixture
extracted with EtOAc. The EtOAc was evaporated under
reduced pressure and the residue purified on CC over Si gel
eluting with CHCl3/MeOH (20:1) to afford 3 (1.53 g, 80%): UV
(MeOH) λmax (log ꢀ) 216 (4.42), 264 (3.97), 299 (3.77) nm; IR
(KBr) νmax 3277, 2984, 1642, 1577, 1453, 1404, 1366, 1318,
solution of 5 (720 mg, 1.39 mmol) in absolute EtOH (20 mL)
was added 10% Pd/C (240 mg) suspended in absolute EtOH
(10 mL). The whole mixture was stirred under a H2 atmo-
sphere at room temperature for 48 h. The catalyst was filtered
off and washed with EtOH (10 mL). The combined filtrate was
evaporated in vacuo to afford 6 (345 mg, 1.39 mmol, 100%):
UV (0.1 M phosphate buffer, pH 7.0) λmax (log ꢀ) 252 (3.93),
287 (3.73) nm; IR (KBr) νmax 3362, 1637, 1604, 1583, 1458,
1288, 1242, 1172, 848, 807 cm-1; 1H NMR (CD3OD, 360 MHz)
δ 6.82 (1H, dd, J ) 8.0, 8.0 Hz, H-5′), 6.54-6.57 (3H, H-2′, -4′,
and -6′), 6.15 (1H, d, J ) 1.9 Hz, H-6), 6.04 (1H, d, J ) 1.9 Hz,
H-4); 13C NMR (CD3COCD3, 90 MHz) δ 172.8 (C-7), 161.7 (C-
5), 160.3 (C-3), 158.9 (C-3′), 148.2 (C-1), 146.1 (C-1′), 129.1 (C-
5′), 120.6 (C-6′), 116.4 (C-2′), 115.1 (C-4′), 111.3 (C-6), 102.5
(C-2, -4); CIMS m/z 247 [M + 1]+ (89), 203 (100); HREIMS
m/z 246.0527 (calcd for C13H10O5, 246.0528).
1
1274, 1225, 1171, 1106 cm-1; H NMR (CD3OD, 360 MHz) δ
7.01 (1H, dd, J ) 7.9, 7.9 Hz, H-5′), 6.60 (1H, dd, J ) 2.4, 7.9
Hz, H-6′), 6.53 (1H, br d, J ) 7.9 Hz, H-4′), 6.50 (1H, br s,
H-2′), 6.17 (1H, d, J ) 1.9 Hz, H-6), 6.08 (1H, d, J ) 1.9 Hz,
H-4), 3.81 (2H, q, J ) 7.2 Hz, -OCH2CH3), 0.69 (3H, t, J )
7.2 Hz, -OCH2CH3); 13C NMR (CD3OD, 90 MHz) δ 172.0 (C-
7), 164.0 (C-5), 162.9 (C-3), 157.9 (C-3′), 148.0 (C-1), 145.7 (C-
1′), 129.7 (C-5′), 120.5 (C-6′), 116.2 (C-2′), 114.7 (C-4′), 111.6
(C-6), 106.7 (C-2), 102.6 (C-4), 61.5 (-OCH2CH3), 13.6
(-OCH2CH3); CIMS m/z 275 [M + 1]+ (100), 229 [M - OC2H5]+
(2); HREIMS m/z 274.0846 (calcd for C15H14O5, 274.0841).
3,3′,5-Tr iben zyloxybip h en yl-2-ca r b oxylic Acid E t h yl
Ester (4). Compound 3 (274 mg, 1.0 mmol) and anhydrous
potassium carbonate (828 mg, 6.0 mmol) in absolute ethanol
(20 mL) were refluxed for 10 min. Benzyl chloride (0.6 mL,
5.2 mmol) and a small amount of potassium iodide were added,
and the mixture was refluxed for 48 h. After cooling, ether
(20 mL) was added, and the precipitate was removed by
filtration and washed with ether. The combined filtrate was
evaporated, H2O (20 mL) was added to the residue, and the
solution was extracted with ether (3 × 30 mL). The ether layer
was dried, evaporated, and chromatographed by column over
Si gel eluting with hexane/EtOAc (15:1) to afford 4 (490 mg,
0.9 mmol, 90%): UV (CHCl3) λmax (log ꢀ) 240 (4.20), 282 (3.65)
nm; IR (KBr) νmax 3431, 2956, 2925, 2854, 1729, 1600, 1462,
3,3′,5-Tr ih yd r oxybip h en yl-2-ca r boxylic Acid Su ccin -
im id e Ester (7). Compound 6 (140 mg, 0.57 mmol) was
dissolved in anhydrous EtOAc (20 mL), and N-hydroxysuccin-
imide (66 mg, 0.57 mmol) and N,N′-dicyclohexylcarbodiimide
(124 mg, 0.60 mmol) were added. Then the whole mixture was
stirred at room temperature for 72 h. The dicyclohexylurea
was filtered off and washed with EtOAc (10 mL). The combined
filtrate and washing were evaporated in vacuo. The residue
was separated on CC eluting with CHCl3/acetone (5:1) to afford
pure succinimide ester 7 (80 mg, 41%) as white amorphous
powder: UV (MeOH) λmax (log ꢀ) 202 (4.25), 215 (sh) (4.18),
230 (sh) (4.06), 274 (3.72), 287 (3.46) nm; IR (KBr) νmax 3421,
2925, 1729, 1615, 1583, 1437, 1361, 1209, 1063 cm-1; 1H NMR
(CD3COCD3, 360 MHz) δ 7.12 (1H, dd, J ) 8.8, 8.0 Hz, H-5′),
6.84 (2H, H-2′and -4′), 6.75 (1H, dd, J ) 2.8, 8.0 Hz, H-6′),
6.44 (1H, d, J ) 2.0 Hz, H-6), 6.39 (1H, d, J ) 2.0 Hz, H-4),
2.81 (4H, s, H of succinimide moiety); 13C NMR (CD3OCD3, 90
MHz) δ 170.4 (2 × -CO- of succinimide moiety), 165.8 (C-7),
163.6 (C-5), 163.0 (C-3), 157.7 (C-3′), 147.7 (C-1), 142.8 (C-1′),
129.9 (C-5′), 120.7 (C-6′), 115.9 (C-2′), 115.3 (C-4′), 112.2 (C-
6), 103.0 (C-2), 102.7 (C-4), 26.0 (2 x -CH2- of succinimide
moiety); CIMS m/z 344 [M + 1]+ (62), 229 [M - succinimide]+
(100); HREIMS m/z 343.0680 (calcd for C17H13NO7, 343.0692).
3,3′,5-Tr ih yd r oxybip h en yl-2-ca r boxylic Acid CoA Es-
ter (8). CoA (10 mg, 0.013 mmol) and 7 (20 mg, 0.058 mmol)
were suspended in a microcentrifuge tube containing 0.5 mL
of 50 mM aqueous NaHCO3 and was chilled to 0 °C. Two drops
of acetone were added to dissolve 7 completely. The mixture
was maintained at 0 °C overnight and separated by PC on
Whatman no. 3 paper developed in n-butanol-acetic acid-
H2O (5:2:3). The biphenylcarbonyl-CoA thiol ester was de-
tected by fluorescence at 366 nm, eluted with H2O, and
lyophilized to give 8 (5.4 mg, 42%). After ascending chroma-
tography on Whatman no. 3 paper, the biphenylcarbonyl-CoA
thiol ester (Rf 0.44) turned a characteristic pink on treatment
with nitroprusside spray reagent under alkaline conditions.
Free phenolic groups were detected by spraying with diazotized
sulfanilic acid in 10% KOH and turned yellow: UV (0.1 M
phosphate buffer, pH 7.0) λmax (log ꢀ) 254 (3.80), 330 (2.91) nm;
IR (KBr) νmax 3416, 1754, 1649, 1573, 1419, 1385, 1261, 1100,
1
1378, 1263, 1167, 1043, 740, 698 cm-1; H NMR (CDCl3, 360
MHz) δ 7.70 (1H, dd, J ) 8.0, 8.0 Hz, H-5′), 7.53 (1H, d, J )
2.0 Hz, H-2′), 7.01 (1H, dd, J ) 8.0, 2.0 Hz, H-4′), 6.96 (1H,
dd, J ) 8.0, 2.0 Hz, H-6′), 6.59 (1H, d, J ) 2.0 Hz, H-6), 6.57
(1H, d, J ) 2.0 Hz, H-4), 5.11, 5.07, 5.05 (each 3H, s, 3 ×
-CH2- of benzyl groups), 4.07 (2H, q, J ) 7.1 Hz, -OCH2-
CH3), 0.99 (3H, t, J ) 7.1 Hz, -OCH2CH3); 13C NMR (CDCl3,
90 MHz) δ 167.7 (C-7), 160.2 (C-5), 158.6 (C-3), 157,1 (C-3′),
144.8 (C-1), 142.5 (C-1′), 130.9 (C-5′), 129.3-127.0 (aromatic
carbons of benzyl groups), 121.0 (C-6′), 114.6 (C-2′), 114.5 (C-
4′), 107.5 (C-6), 100.0 (C-2, 4), 70.5, 70.3, 70.0 (3 × -CH2- of
benzyl groups), 61.0 (-OCH2CH3), 14.0 (-OCH2CH3); CIMS
m/z 545 [M + 1]+ (100), 455 (19), 365 (16), 275 (7). HREIMS
m/z 544.2276 (calcd for C36H32O5, 544.2250).
3,3′,5-Tr iben zyloxybip h en yl-2-ca r boxylic Acid (5). A
solution of 4 (490 mg, 0.9 mmol) in 10% NaOH/EtOH (10 mL)
was refluxed for 3 h and monitored by TLC to determine the
reaction progress. The mixture was adjusted to pH 3-4 with
concentrated HCl with stirring in an ice-water bath. The
white salt was washed with ether, the ether layer was
evaporated, and the residue was separated by CC eluting with
hexane/EtOAc (5:1) to afford pure 5 (404 mg, 0.78 mmol,
87%): UV (MeOH) λmax (log ꢀ) 210 (4.87), 258 (sh) (4.01), 286
1
1057, 1021, 736, 668 cm-1; H NMR (D2O, 360 MHz) δ 8.32
(1H, s, H-5 of CoA), 8.13 (1H, s, H-2 of CoA), 7.10 (1H, dd, J
) 8.0, 8.0 Hz, H-5′), 6.72 (1H, br s, H-2′), 6.70 (1H, d, J ) 8.0