1,2,3,4-Tetrahydropyrimidine Derivatives
83
ddd, J = 17.0, 3.0, 1.5 Hz, C=CHtrans), 5.29 (1H, ddd, J = 10.0, 3.0, 1.1 Hz,
C=CHcis), 4.73 (2H, ddd, J = 6.0, 1.5, 1.1 Hz, OCH2).– 13C-NMR (75 MHz,
CDCl3) δ: 158.9 (C2), 154.7 (C4, C6), 142.8 (C=N), 133.3 (CH=CH2), 125.8
(C5), 118.5 (CH=CH2), 75.8 (OCH2).– MS m/z: 163.0746 (Calcd for
C8H9N3O: 163.0746).
(2d): Yield 83%. mp 76–79 °C. IR (KBr) ν: 3300, 2100, 1580, 940.–
1H-NMR (300 MHz, CDCl3) δ: 9.22 (1H, s, C2-H), 8.96 (2H, s, C4-H, C6-H),
8.13 (1H, s, CH=N), 4.83 (2H, d, J = 2.4 Hz, OCH2), 2.57 (1H, t, J = 2.4 Hz,
C≡CH).– 13C-NMR (75 MHz, CDCl3) δ: 159.6 (C2), 155.3 (C4, C6), 144.6
(C=N), 126.5 (C5), 79.2 (OCH2), 75.7 (C≡CH), 62.8 (C≡CH).– Anal. Calcd.
For C8H7N3O: C, 59.62; H, 4.38; N, 26.07. Found: C, 59.34; H, 4.35; N,
26.07.
brs, NH), 6.82 (1H, d, C6-H), 5.91 (1H, ddt, J = 17.0, 10.0, 6.0 Hz, CH=CH2),
5.23 (1H, ddd, J = 17.0, 3.0, 1.5 Hz, C=CHtrans), 5.14 (1H, ddd, J = 10.0,
3.0, 1.1 Hz, C=CHcis), 4.50 (brs, COOH), 4.39 (2H, ddd, J = 6.0, 1.5, 1.1
Hz, OCH2), 4.16 (2H, s, C2-H), 3.61 (2H, s, C4-H), 2.62 (3H, s, NCH3).–
13C-NMR (75 MHz, DMSO-d6) δ: 164.7 (C=O), 149.0 (C=N), 137.1 (C6),
135.1 (CH=CH2), 117.3 (CH=CH2), 97.2 (C5), 73.8 (OCH2), 61.4 (C2), 49.2
(C4), 38.9 (NCH3).– MS m/z: 181.1213 (Calcd for C9H15N3O: 181.1215).
(4d): Yield 31%. mp >135 °C (decomp). IR (KBr) ν: 3400, 3300, 2920,
1
1640.– H-NMR (200 MHz, DMSO-d6) δ: 7.71 (1H, s, CH=N), 7.09 (1H,
brs, NH), 6.87 (1H, s, C6-H), 5.16 (brs, COOH), 4.50 (2H, d, J = 2.4 Hz,
OCH2), 4.18 (2H, s, C2-H), 3.62 (2H, s, C4-H), 3.38 (1H, t, J = 2.4 Hz,
C≡CH), 2.63 (3H, s, NCH3).– 13C-NMR (75 MHz, DMSO-d6) δ: 164.7
(C=O), 149.9 (C=N), 137.9 (C6), 96.7 (C5), 80.9 (C≡CH ), 77.2 (OCH2),
61.3 (C2), 60.7 (C≡CH), 49.1 (C4), 38.9 (NCH3).– MS m/z: 179.1055 (Calcd
for C9H13N3O: 179.1059).
(2e): Yield 60%. mp 42–44 °C. IR (neat) ν: 3000, 1580, 1410.– 1H-NMR
(300 MHz, CDCl3) δ: 9.17 (1H, s, CH=N), 8.89 (2H, s, C4-H, C6-H), 8.07
(1H, s, C2-H), 7.35–7.40 (5H, m, Ph-H), 5.24 (2H, s, OCH2).– 13C-NMR (75
MHz, CDCl3) δ: 158.8 (C2), 154.6 (C4, C6), 142.9 (C=N), 136.7 (C1′), 128.4
(C2′, C3′), 128.1 (C4′), 126.4 (C5), 76.9 (OCH2).– Anal. Calcd. For
C12H11N3O: C, 67.59; H, 5.20; N, 19.71. Found: C, 67.47; H, 5.23; N, 19.48.
(2f): Yield 69%. mp 85–88 °C. IR (KBr) ν: 2900, 1610, 1580, 1000.–
1H-NMR (300 MHz, CDCl3) δ: 9.17 (1H, s, CH=N), 8.89 (2H, s, C4-H,
C6-H), 8.06 (1H, s, C2-H), 7.20 (4H, 2×d, J = 8.0 Hz, Ph-H), 5.20 (2H, s,
OCH2), 2.35 (3H, s, CH3).– 13C-NMR (75 MHz, CDCl3) δ: 158.8 (C2), 154.6
(C4, C6), 142.9 (C=N), 138.1 (C1′), 133.6 (C4′), 129.1 (C3′), 128.6 (C2′),
126.5 (C5), 76.9 (OCH2), 21.1 (CH3).– Anal. Calcd. For C13H13N3O: C,
68.70; H, 5.77; N, 18.49. Found: C, 68.26; H, 5.93; N, 18.50.
(4e): Yield 24%. mp >148 °C (decomp). IR (KBr) ν: 3400, 3280, 3030,
1
1640.– H-NMR (300 MHz, DMSO-d6) δ: 7.74 (1H, s, CH=N), 7.32 (5H,
m, Ph-H), 7.05 (1H, brs, NH), 6.84 (1H, s, C6-H), 5.3 (brs, COOH), 4.93
(2H, s, OCH2), 4.18 (2H, s, C2-H), 3.63 (2H, s, C4-H), 2.63 (3H, s, NCH3).–
13C-NMR (75 MHz, DMSO-d6) δ: 164.6 (C=O), 149.3 (C=N), 138.4 (C1′),
137.3 (C6), 128.5, 128.2, 127.8 (C2′, C3′, C4′), 97.2 (C5), 74.9 (OCH2), 61.4
(C2), 49.2 (C4), 38.9 (NCH3).– MS m/z: 231.1369 (Calcd for C13H17N3O:
231.1372).
(4f): Yield 19%. mp >146 °C (decomp). IR (KBr) ν: 3420, 3300, 2930,
1640.– 1H-NMR (300 MHz, DMSO-d6) δ: 9.34 (brs, COOH), 7.74 (1H, s,
CH=N), 7.27 (5H, 2×d, brs, Ph-H, NH), 6.85 (1H, s, C6-H), 4.88 (2H, s,
OCH2), 4.25 (2H, s, C2-H), 3.70 (2H, s, C4-H), 2.68 (3H, s, NCH3), 2.27
(3H, s, CH3).–13C-NMR (75 MHz, DMSO-d6) δ: 164.7 (C=O), 149.1 (C=N),
137.2 (C6), 136.9 (C1′), 135.3 (C4′), 129.0, (C2′), 128.4, (C3′), 97.2 (C5),
74.8 (OCH2), 61.4 (C2), 49.2 (C4), 38.9 (NCH3), 21.0 (CH3).– MS m/z:
245.1530 (Calcd for C14H19N3O: 245.1528).
(4g): Yield 20%. mp >149 °C (decomp). IR (KBr) ν: 3410, 3280, 2930,
1640.– 1H-NMR (300 MHz, DMSO-d6) δ: 8.53 (brs, COOH), 7.76 (1H, s,
CH=N), 7.36 (4H, 2×d, Ph-H), 7.21 (1H, brs, NH), 6.86 (1H, s, C6-H), 4.92
(2H, s, OCH2), 4.25 (2H, s, C2-H), 3.68 (2H, s, C4-H), 2.67 (3H, s, NCH3).–
13C-NMR (75 MHz, DMSO-d6) δ: 164.6 (C=O), 149.5 (C=N), 137.5 (C1′),
137.4 (C6), 132.3 (C4′), 129.9, (C2′), 128.5, (C3′), 97.1 (C5), 73.9 (OCH2),
61.4 (C2), 49.1 (C4), 38.9 (NCH3).– MS m/z: 265.0981 (Calcd for
C13H16N3OCl: 265.0982).
(2g): Yield 75%. mp 75–77 °C. IR (KBr) ν: 2950, 1600, 1550.– 1H-NMR
(300 MHz, CDCl3) δ: 9.18 (1 H, s, CH=N), 8.89 (2H, s, C4-H, C6-H), 8.08
(1H, s, C2-H), 7.34 (4H, s, Ph-H), 5.20 (2H, s, OCH2).– 13C-NMR (75 MHz,
CDCl3) δ: 158.9 (C2), 154.7 (C4, C6), 143.3 (C=N), 135.2 (C1′), 133.9 (C4′),
129.7 (C3′), 128.6 (C2′), 126.3 (C5), 76.0 (OCH2).– Anal. Calcd. For
C12H10N3OCl: C, 58.19; H, 4.07; N, 16.97. Found: C, 57.95; H, 3.91; N,
16.64.
General Procedure for the Preparation of 3-Methyl-1,2,3,4-tetrahy-
dropyrimidine-5-carbaldehyde O-Substituted Oxime Oxalate (4a–4g)
To a stirred solution of pyrimidine-5-carbaldehyde O-alkyl-oxime 2 in
acetone (5 ml/mmol) was added MeI (12.0 eq), then the mixture was heated
under reflux for 48–72 h. Yellow precipitates were collected by filtration and
dried under vacuum. Attempted purification by recrystallization from MeOH
resulted in deterioration of the material, thus the crude products were used
in the next step without further purification. The methiodide 3a–3g was
dissolved in MeOH (5ml/mmol) then cooled to –30 °C. To this was added
portions of NaBH4 (1.2 eq) maintaining the temperature below –20 °C. The
reaction was quenched with a small amount of water then the solvent was
evaporated in vacuo. The residue was dissolved in 50 ml CH2Cl2 then washed
with water, dried over MgSO4 then concentrated. The residue was subjected
to silica gel flash chromatography (MeOH:EtOAc = 1:9) to give a deep
red-brown syrup. To a stirred solution of above syrup in 2 ml MeOH was
added a solution of oxalic acid (1.0 eq) in 1.5 ml MeOH. After 1 h stirring
at room temperature, the precipitates were filtered off to afford a pale yellow
powder upon drying under vacuum.
(4a): Yield 18%. mp >135 °C(decomp). IR (KBr) ν: 3340, 2900, 1640.–
1H-NMR (200 MHz, DMSO-d6) δ: 7.65 (1H, s, CH=N), 6.97 (1H, brs, NH),
6.82 (1H, s, C6-H), 5.40 (COOH), 4.17 (2H, s, C2-H), 3.66 (3H, s, OCH3),
3.62 (2H, s, C4-H), 2.62 (3H, s, NCH3).– 13C-NMR (50 MHz, DMSO-d6) δ:
164.7 (C=O), 148.7 (C=N), 137.0 (C6), 97.1 (C5), 61.3 (C2), 61.0 (OCH3),
49.1 (C4), 38.9 (NCH3).– MS m/z: 155.1056 (Calcd for C7H13N3O:
155.1059).
1-(5-Pyrimidinyl)-1-ethanol (5)
To a stirred solution of pyrimidine-5-carbaldehyde 1 (1.50 g, 13.87 mmol)
in dry ether (10 ml) at 0 °C was added dropwise CH3MgBr (5.09 ml, 3.0 M
in ether). The resulting suspension was stirred for another 1 h at room
temperature then cooled to 0 °C. A saturated aqueous solution of NH4Cl was
added until the cloudy mixture became clear. The solvent was evaporated,
and the residue was mixed well with silica gel then subjected to flash
chromatography on silica gel (EtOAc) to afford 5 (1.15 g, 67%) as a clear
light yellow oil. IR (NaCl, neat) ν: 3300 (OH), 2950, 1560.– 1H-NMR (300
MHz, CDCl3) δ: 9.05 (1H, s, C2-H), 8.74 (2H, s, C4-H, C6-H), 5.00 (1H, q,
J = 6.8 Hz, CH(OH)CH3), 4.38 (1H, brs, OH), 1.57 (3H, d, J = 6.8 Hz,
CH(OH)CH3).– 13C-NMR (75 MHz, CDCl3) δ: 157.2 (C2), 154.3 (C4, C6),
138.8 (C5), 65.7 (CHOH), 24.9 (CH3).– MS m/z: 124.0635 (Calcd for
C6H8N2O: 124.0637).
1-(5-Pyrimidinyl)-1-ethanone (6)
1-(5-Pyrimidinyl)-1-ethanol 5 (0.31 g, 2.50 mmol) was dissolved in 15 ml
CH2Cl2 then to this was added 4Å Molecular sieves powder (2.00 g,
0.80 g/mmol), activated overnight at 80 °C), pyridinium dichromate (0.94 g,
2.50 mmol), and acetic acid (0.25 ml, 4.37 mmol) in the order. After 20 min
stirring at room temperature, filtered through a Celite pad, the filter cake was
washed well with CH2Cl2 then the filtrate was washed with aq. NaHCO3
solution. The organic layer was dried over MgSO4 then concentrated. The
residue was subjected to flash chromatography on silica gel (EtOAc:Hex =
1:1) to afford 6 (0.20 g, 67%) as a white solid. mp 80–81 °C. IR (KBr) ν:
3000, 1680, 1280.– 1H-NMR (300 MHz, CDCl3) δ: 9.39 (1H, s, C2-H), 9.25
(2H, s, C4-H, C6-H), 2.69 (3H, s, CH3).– 13C-NMR (75 MHz, CDCl3) δ:
(4b): Yield 10%. mp>125 (decomp). IR (KBr) ν: 3370, 2940, 1640.–
1H-NMR (200 MHz, DMSO-d6) δ: 7.66 (1H, s, CH=N), 6.95 (1H, brs, NH),
6.80 (1H, s, C6-H), 5.50 (brs, COOH), 4.17 (2H, s, C2-H), 3.85 (2H, t,
OCH2), 3.63 (2H, s, C4-H), 2.63 (3H, s, NCH3), 1.54 (2H, m, CH2), 1.26
(4H, m, 2×CH2), 0.85(3H, t, CH3).– 13C-NMR (50 MHz, DMSO-d6) δ: 164.5
(C=O), 148.3 (C=N), 136.7 (C6), 97.5 (C5), 72.9 (OCH2), 61.4 (C2), 49.2
(C4), 38.9 (NCH3), 28.5, 28.0, 22.2(3×CH2), 14.2 (CH3).– MS m/z: 211.1683
(Calcd for C11H21N3O: 211.1685).
(4c): Yield 20%. mp >140 °C(decomp). IR (KBr) ν: 3400, 3290, 2930,
1
1640.– H-NMR (300 MHz, DMSO-d6) δ: 7.70 (1H, s, CH=N), 6.98 (1H,
Arch. Pharm. Pharm. Med. Chem. 334, 79–85 (2001)