Adenosine and Uridine Conjugated Diene Analogues
J ournal of Medicinal Chemistry, 2002, Vol. 45, No. 12 2655
1-[8,8-Dib r om o-5,6,7,8-t et r a d eoxy-â-D-r ibo-oct -5(E)-7-
d ien ofu r a n osyl]u r a cil (5a ). A solution of 4a (46 mg, 0.1
mmol) in CF3CO2H/H2O (9:1, 3 mL) was stirred at ∼0 °C (ice-
bath) for 1 h. Volatiles were evaporated under oil-pump
vacuum (<10 °C), coevaporated with toluene (3×), and kept
under vacuum for 1 h. Column chromatography (EtOAc f 3%
MeOH/EtOAc) of the residue and crystallization (MeOH/
EtOAc) gave 5a (26 mg, 62%); mp 167-169 °C. UV: max 252
3, 2 × Me), 4.14 (q, J ) 7.2 Hz, 2, CH2), 4.79 (dd, J ) 3.4, 6.2
Hz, 1, H4′), 5.10 (dd, J ) 3.5, 6.1 Hz, 1, H3′), 5.56 (dd, J )
1.5, 6.2 Hz, 1, H2′), 5.80 (d, J ) 15.4 Hz, H8′), 6.10 (dd, J )
6.4, 15.3 Hz, 1, H5′), 6.19 (s, 1, H1′), 6.22 (dd, J ) 10.8, 15.4
Hz, 1, H6′), 7.10 (dd, J ) 10.3, 15.4 Hz, H7′), 7.48-8.03 (m, 5,
H
arom), 8.11 (s, 1, H2), 8.75 (s, 1, H8), 9.51 (br s, 1, NH). MS:
m/z 506 (100, MH+).
Eth yl 1,5,6,7,8-P en ta d eoxy-1-(u r a cil-1-yl)-â-D-r ibo-n on -
5(E),7(E)-d ien ofu r a n u r on a te (7a ). A solution of 6a (113 mg,
0.3 mmol) in CF3CO2H/H2O (9:1, 5 mL) was stirred at ∼0 °C
(ice-bath) for 1 h. Volatiles were evaporated under vacuum,
coevaporated with toluene (3 ×), and kept under vacuum for
1 h. Column chromatography (EtOAc f 3% MeOH/EtOAc) and
crystallization (MeOH) gave 7a (69 mg, 68%) as white needles;
mp 177-178 °C. UV: max 259 nm (ꢀ 37 300), min 223 nm (ꢀ
8500). 1H NMR (Me2SO-d6): δ 1.22 (t, J ) 7.1 Hz, 3, CH3),
3.88 (q, J ) 5.5 Hz, 1, H3′), 4.10 (q, J ) 5.0 Hz, 1, H2′), 4.13
(q, J ) 7.1 Hz, 2, CH2), 4.32 (t, J ) 5.7 Hz, 1, H4′), 5.42 (d,
J ) 6.0 Hz, 1, OH3′), 5.57 (d, J ) 5.4 Hz, 1, OH2′), 5.66 (d,
J ) 8.0 Hz, 1, H5), 5.77 (d, J ) 4.5 Hz, 1, H1′), 6.05 (d, J )
15.4 Hz, 1, H8′), 6.43 (dd, J ) 6.1, 15.3 Hz, 1, H5′), 6.50 (dd,
J ) 9.8, 15.3 Hz, 1, H6′), 7.26 (dd, J ) 9.9, 15.3 Hz, 1, H7′),
7.62 (d, J ) 8.1 Hz, 1, H6), 10.40 (br s, 1, NH). 13C NMR (Me2-
SO-d6): δ 14.50, 60.32, 73.08 and 73.92 (C2′ and C3′), 88.29
(C4′), 89.43 (C1′), 102.45 (C5), 122.21 (C8′), 129.67 (C6′), 140.48
(C5′), 141.39 (C6), 144.00 (C7′), 151.45 (C2), 164.00 (C4), 166.41
(C9′). MS: m/z 339 (MH+). Anal. [C15H18N2O7 (338.33)] C,
H, N.
1
nm (ꢀ 24 400), min 222 nm (ꢀ 7300). H NMR (Me2SO-d6): δ
3.88 (q, J ) 5.5 Hz, 1, H3′), 4.09 (q, J ) 4.8 Hz, 1, H2′), 4.28
(t, J ) 4.8 Hz, 1, H4′), 5.40 (d, J ) 6.1 Hz, 1, OH3′), 5.55 (d,
J ) 5.3 Hz, 1, OH2′), 5.67 (d, J ) 8.0 Hz, 1, H5), 5.76 (d, J )
4.2 Hz, 1, H1′), 6.24-6.27 (m, 2, H5′,6′), 7.29 (dd, J ) 4.9, 6.3
Hz, 1, H7′), 7.60 (d, J ) 8.1 Hz, 1, H6), 11.40 (br s, 1, NH). 13
C
NMR (Me2SO-d6): δ 72.86 (C3′), 73.69 (C2′), 83.17 (C4′), 89.54
(C1′), 92.03 (C8′), 102.37 (C5), 128.06 (C6′), 136.21 (C5′), 136.54
(C7′), 141.37 (C6), 150.88 (C2), 163.37 (C4). MS: m/z 427 (47,
MH+ [81Br2]), 425 (100, MH+ 81/79Br2]), 423 (48, MH+ [79Br2]).
[
Anal. [C12H12Br2N2O5 (424.05)] C, H.
Eth yl 1,5,6,7,8-P en tadeoxy-2,3-O-isopr opyliden e-1-(u r a-
cil-1-yl)-â-D-r ibo-n on -5(E),7(E)-d ien ofu r a n u r on a t e (6a ).
Meth od A. (Carbethoxymethylene)triphenylphosphorane (191
mg, 0.55 mmol) was added to a stirred solution of 2a (154 mg,
0.5 mmol) in dried CH2Cl2 (10 mL) at ambient temperature
under N2. After 14 h, the reaction mixture was partitioned
(NaHCO3/H2O/CH2Cl2), and the organic layer was washed
(brine) and dried (MgSO4), and volatiles were evaporated.
Column chromatography (50 f 60% EtOAc/hexane) gave 6a
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(153 mg, 81%). H NMR: δ 1.32 (t, J ) 7.1 Hz, 3, CH3), 1.37
E t h yl 1-(Ad en in -9-yl)-1,5,6,7,8-p en t a d eoxy-â-D-r ibo-
n on -5(E),7(E)-d ien ofu r a n u r on a te (7b). (Step a). A solution
of 6c (126 mg, 0.25 mmol) in NH3/MeOH (10 mL) was stirred
overnight at ∼5 °C. Volatiles were evaporated, and the residue
was flash chromatographed (50 f 70% EtOAc/hexane) to give
6b (89 mg, 89%). (Step b). Treatment of 6b (60 mg, 0.15 mmol)
with TFA/H2O (as described for 5a ) and crystallization (MeOH)
gave 7b (40 mg, 72%; 64% total); mp 117-119 °C. UV: max
259, 257 nm (ꢀ 39 000, 39 100), min 258, 223 nm (ꢀ 38 700,
9600). 1H NMR (Me2SO-d6): δ 1.22 (t, J ) 7.1 Hz, 3, CH3),
4.14 (q, J ) 7.2 Hz, 2, CH2), 4.19 (q, J ) 5.1 Hz, 1, H3′), 4.45
(t, J ) 4.3 Hz, 1, H4′), 4.67 (q, J ) 5.3 Hz, 1, H2′), 5.52 (d,
J ) 5.7 Hz, 1, OH3′), 5.57 (d, J ) 5.6 Hz, 1, OH2′), 5.96 (d,
J ) 4.9 Hz, 1, H1′), 6.02 (d, J ) 15.3 Hz, 1, H8′), 6.46-6.51
(m, 2, H5′,6′), 7.28 (dd, J ) 10.1, 15.3 Hz, 1, H7′), 7.31 (br s,
2, NH2), 8.13 (s, 1, H2), 8.32 (s, 1, H8). 13C NMR (Me2SO-d6):
δ 14.40, 60.25, 73.02 and 74.12 (C2′ and C3′), 84.75 (C4′), 89.10
(C1′), 119.95 (C5), 121.90 (C8′), 129.25 (C6′), 140.10 (C5′),
140.70 (C8), 143.96 (C7′), 149.65 (C4), 152.94 (C2), 156.20 (C6),
166.70 (C9′). MS: m/z 362 (100, MH+). Anal. [C16H19N5O5‚H2O
(379.38)] C, H, N.
and 1.59 (2 × s, 2 × 3, 2 × Me), 4.22 (q, J ) 7.1 Hz, 2, CH2),
4.62 (dd, J ) 4.3, 7.0 Hz, 1, H4′), 4.84 (dd, J ) 4.4, 6.5 Hz, 1,
H3′), 5.11 (dd, J ) 1.3, 6.3 Hz, 1, H2′), 5.57 (d, J ) 1.1 Hz, 1,
H1′), 5.75 (d, J ) 8.0 Hz, H5), 5.90 (d, J ) 15.4 Hz, 1, H8′),
6.24 (dd, J ) 7.1, 15.3 Hz, 1, H5′), 6.38 (dd, J ) 10.3, 15.3 Hz,
1, H6′), 7.24 (d, J ) 7.9 Hz, 1, H6), 7.28 (dd, J ) 10.3, 15.4
Hz, H7′), 10.05 (br s, 1, NH). 13C NMR: δ 14.64, 25.65, 27.49,
60.85, 84.85 and 85.14 (C2′ and C3′), 88.73 (C4′), 95.82 (C1′),
103.07 (C5), 114.99, 123.34 (C8′), 130.86 (C6′), 138.44 (C5′),
143.33 and 143.44 (C6 and C7′), 150.50 (C2), 164.16 (C4),
167.05 (C9′). MS: m/z 379 (MH+).
Meth od B. Ethyl (E)-3-iodopropenoate23 (49 µL, 80 mg, 0.35
mmol) was added to 14a 20 (160 mg, 0.29 mmol) and Pd(PPh3)4
(15 mg, 0.013 mmol) in dried THF (7 mL), and the solution
was gently heated (oil bath, 70 °C) for about 2.5 h. Volatiles
were evaporated, and the residue was partitioned (NaHCO3/
H2O/CH2Cl2). The organic layer was washed (diluted Na2S2O3,
brine), dried (MgSO4), evaporated, and column-chromato-
graphed (55 f 70% EtOAc/hexane or CH2Cl2 f 3% MeOH/
CH2Cl2) to give 6a (82 mg, 75%).
Note. Care has to be taken to avoid unnecessary heating
and prolonged reaction time. The coupling reactions were
usually ceased when TLC showed ∼90-95% consumption of
vinyl stannanes 14 in order to avoid/minimize isomerization
of dienes.
3-O-Ben zoyl-5,6-dideoxy-2,3-O-isopr opyliden e-r-D-r ibo-
h ep t-5(E)-en od ia ld o-1,4-fu r a n ose (9). Treatment of 3-O-
benzoyl-1,2;5,6-di-O-isopropylidene-R-D-allofuranose8a (3 g, 8.25
mmol) with H5IO6 (crude 5-aldehyde was dissolved in EtOAc
and washed with NaHCO3/H2O) and Ph3PdCHCHO (2 h; as
1
described for 10, step a) gave 9 (2.1 g, 80%). H NMR: δ 1.21
E t h yl 1-(Ad en in -9-yl)-1,5,6,7,8-p en t a d eoxy-2,3-O-iso-
p r op ylid en e-â-D-r ibo-n on -5(E),7(E)-d ien ofu r a n u r on a t e
(6b). Treatment of 14b5 (55 mg, 0.093 mmol) with ethyl (E)-
3-iodopropenoate23 (14 µL, 25 mg, 0.11 mmol) (as described
and 1.50 (2 × s, 2 × 3, 2 × Me), 4.75 (dd, J ) 4.8, 9.4 Hz, 1,
H3), 4.88 (ddd, J ) 1.3, 4.9, 9.0 Hz, 1, H4), 4.94 (t, J ) 4.1 Hz,
1, H2), 5.85 (d, J ) 3.6 Hz, 1, H1), 6.33 (ddd, J ) 1.3, 7.7, 15.8
Hz, 1, H6), 6.80 (dd, J ) 4.9, 15.7 Hz, 1, H5), 7.36 (t)/7.49 (t)/
7.97 (d, 5, Harom), 9.50 (d, J ) 7.8 Hz, H7). 13C NMR: δ 26.81
and 26.94 (CMe2), 76.50 (C2), 76.57 (C3), 78.76 (C4), 104.83
(C1), 113.7 (CMe2), 128.90/129.24/130.88/133.98 (Bz), 132.90
(C6), 150.94 (C5), 165.80 (Bz), 193.23 (C7). HRMS (CI): m/z
319.1173 (100, MH+ [C17H19O6] ) 319.1182).
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for 6a , method B) gave 6b (27 mg, 73%). H NMR: δ 1.28 (t,
J ) 7.1 Hz, 3, CH3), 1.41 and 1.63 (2 × s, 2 × 3, 2 × Me), 4.19
(q, J ) 7.1 Hz, 2, CH2), 4.78 (dd, J ) 3.4, 6.2 Hz, 1, H4′), 5.12
(dd, J ) 3.5, 6.1 Hz, 1, H3′), 5.56 (br d, J ) 6.2 Hz, 1, H2′),
5.80 (d, J ) 15.4 Hz, 1, H8′), 5.88 (br s, 2, NH2), 6.11 (s, 1,
H1′), 6.17 (dd, J ) 6.4, 15.4 Hz, 1, H5′), 6.25 (dd, J ) 10.5,
15.3 Hz, 1, H6′), 7.13 (dd, J ) 10.5, 15.4 Hz, 1, H7′), 7.89 (s, 1,
H2), 8.37 (s, 1, H8). MS: m/z 402 (MH+). Depending on the
experiment, diene 6b was contaminated by isomer 15b (5-
8,8-Dibr om o-5,6,7,8-tetr a d eoxy-1,2-O-isop r op ylid en e-
r-D-r ibo-oct-5(E)-7-d ien ofu r a n ose (10). (Step a). H5IO6
(2.19 g, 9.6 mmol) was added to a solution of 1,2;5,6-di-O-
isopropylidene-R-D-allofuranose8a (2 g, 7.68 mmol) in dried
EtOAc (80 mL) at ambient temperature, and stirring was
continued for 2 h (TLC showed conversion into more polar
5-aldehyde). The mixture was filtered, the filter cake was
washed (EtOAc), and the combined filtrate was evaporated.
The residue was dissolved in dried CH2Cl2 (50 mL), (triphen-
ylphosphoranylidene)acetaldehyde (2.33 g, 7.68 mmol) was
1
20%; H NMR).
Eth yl 1-(6-N-Ben zoyla d en in -9-yl)-1,5,6,7,8-p en ta d eoxy-
2,3-O-isop r op ylid en e-â-D-r ibo-n on -5(E),7(E)-d ien ofu r a n -
u r on a te (6c). Treatment of 2c (287 mg, 0.66 mmol) with
(carbethoxymethylene)triphenylphosphorane (243 mg, 0.7 mmol)
(as described for 6a , method A) gave 6c (216 mg, 65%). 1H
NMR: δ 1.25 (t, J ) 7.1 Hz, 3, CH3), 1.39 and 1.62 (2 × s, 2 ×