6 h. The reaction vessel was cooled with dry-ice/MeOH bath.
MeOH was removed under reduced pressure and the residue was
purified through flash chromatography (silica gel/hexane–ethyl
acetate 10 : 1, then 1 : 1). Methyl 6-hydroxycapronate (compound
4) was isolated in 44% yield (0.1771 g, 1.212 mmol). Colourless
oil. 1H NMR dH (270 MHz, d3-CDCl3): 1.33–1.40 (2H, m,
–CH2–), 1.52–1.71 (4H, m, –CH2CH2–), 2.33 (2H, t, J = 7.6 Hz,
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–CH2-CO Me), 3.18 (1 H, s, OH), 3.58 (2H, t, J = 6.3 Hz, –CH2–
2
OH), 3.67 (3H, s, –CO2CH3); 13C dC (67.5 MHz, d3-CDCl3):
24.4 (C5), 25.1 (C4), 32.0 (C3), 33.7 (C2), 51.2 (–CO2CH3), 62.0
(C6), 174.1 (C1). HRMS (CI) [M + 1]: calculated for C7H15O3,
147.1021; observed 147.1021. Methyl 5-hexenoate (compound
5). 1H NMR dH (400 MHz, d3-CDCl3): 1.73 (2H, m, J = 7.3 Hz,
–CH2CH2CH2–), 2.09 (2H, q, J = 7.0 Hz, = CHCH2CH2CH2–),
2.32 (2H, t, J = 7.3 Hz, –CH2CO2Me), 3.67 (3H, s, CO2CH3),
4.96-5.05 (2H, m, CH2 CH–), 5.72–5.82 (1H, m, CH2 CH-);
13C dC (100 MHz, d3-CDCl3): 24.2 (C3), 33.2 (C4), 33.4 (C2),
51.6 (–CO2CH3), 115.5 (C6), 137.8 (C5), 174.1 (C1). MS (EI)
m/z 128 (M+, 30), 110 (19), 97 (35), 74 (100).
Parameter estimation and simulation
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Numerical integrations and optimizations by using the Runge–
Kutta method and Simplex algorithm, respectively, were per-
formed to estimate the kinetic parameters and to simulate the
reactions. The optimizations were performed by a downhill sim-
plex method using the software ‘ModelMaker’ obtained from
Cherwell Scientific Publishing Ltd, Oxford (U.K.). The objective
function is a residual sum of squares for minimization of the
difference between the calculated values and the experimental
data.
Acknowledgements
We are grateful to a financial aid from Yamaguchi University
based on The YU Strategic Program for Fostering Research
Activities (2010–2011).
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