D.D. Wirth et al. / European Journal of Medicinal Chemistry 37 (2002) 23–34
29
mg (89%) of 14 as a colorless solid. Rf 0.41 (C6H14–
EtOAc, 3:2); IR (KBr): 793, 907, 1249, 1366, 1459,
1513, 1621, 1731, 3332, 3428 cm−1; UV (EtOH): umax
chromatography of the residue on silica gel (from 55 to
60% ethyl ether in C6H14) gave 634 mg (53%) of 16 as
a white solid. Rf 0.31 (C6H14–ethyl ether, 1:1); IR
(KBr): 833, 841, 1056, 1107, 1264, 1309, 1345, 1437,
1519, 1554, 3335, cm−1; UV (EtOH): umax (m) 260 nm
(2713); H-NMR (CDCl3): l 3.00 (s, 1H), 5.00 (s, 2H).
Anal. Calc. for C5H3Cl2N3O3: C, 26.81; H, 1.35; N,
18.76. Found: C, 27.11; H, 1.35; N, 18.72%.
1
(m) 314 (5676), 253 nm (11 629); H-NMR (CDCl3): l
2.21 (s, 3H), 4.55 (s, 2H) 5.16 (s, 2H); MS (FD): 235
[M+, 100%]. HRMS Calc. for C7H7Cl2N3O2: 234.9917.
Found: 234.9920.
1
6.1.6. 2-Acetoxymethyl-4,6-dichloro-5-(1-acetyl-
imidazolidin-2-ylidenimino)-pyrimidine (15)
6.1.9. 2-Methoxycarbonyl-4,6-dichloro-5-
To a solution of 14 (191 mg, 0.81 mmol) in phospho-
rus oxychloride (1 mL) was added N-acetylimidazo-
lidin-2-one [15] (114 mg, 0.89 mmol) in one portion.
The reaction mixture was heated at 105–110 °C (bath)
for 3 h and evaporated under vacuum. The residue was
diluted with ice H2O (2 mL), made alkaline with aq.
NaOH (5N, 2 mL) and extracted with CH2Cl2 (3×5
mL). The extract was washed with saturated aq. solu-
tions of NaHCO3 and NaCl, dried over Na2SO4 and
evaporated under vacuum. Flash chromatography of
the residue on silica gel (from 50 to 60% EtOAc in
C6H14) gave 166 mg (59%) of 15 as a colorless solid. Rf
0.21 (C6H14–EtOAc, 1:1); IR (KBr): 815, 1033, 1074,
1219, 1355, 1378, 1414, 1497, 1657, 1675, 1752, 3254,
nitropyrimidine (17)
To a solution of 16 (625 mg, 2.79 mmol) in C3H6O
(15 mL) at 0–5 °C was added Jones reagent (8N, 2.9
mL) dropwise. The reaction mixture was allowed to
reach r.t. over the period of 2 h and treated with
isopropyl alcohol (2 mL). The resulting suspension was
stirred for 15 min and evaporated under vacuum. The
residue was diluted with H2O (5 mL) and extracted with
Et2O (60 mL). The extract was washed with saturated
aq. NaCl, and the combined water layer was re-ex-
tracted with Et2O. The combined organic extract was
dried over MgSO4 and evaporated under vacuum to
give 2-carboxy-4,6-dichloro-5-nitropyrimidine as
a
white solid, which was dissolved in Et2O (35 mL),
treated with an excess of ethereal diazomethane, and
evaporated under vacuum. Flash chromatography of
the residue on silica gel (45% ethyl ether in C6H14) gave
449 mg (64%) of 17 as a white solid. Rf 0.61 (C6H14–
ethyl ether, 1:1); IR (KBr): 816, 845, 836, 974, 1171,
1211, 1283, 1300, 1330, 1345, 1430, 1521, 1536, 1558,
1
cm−1; UV (EtOH): umax (m) 245 nm (12 118); H-NMR
(CDCl3): l 2.23 (s, 3H), 2.70 (s, 3H), 3.58 (t, J=7.98
Hz, 2H), 4.11 (t, J=7.98 Hz, 2H), 4.74 (s, 1H), 5.19 (s,
2H); HRMS (FAB) Calc. for C12H13Cl2N5O3: 346.0474.
Found: 346.0481.
1
6.1.7. 2-Hydroxymethyl-4-chloro-5-(imidazolidin-2-
ylidenimino)-6-methoxypyrimidine (5)
1746, 3420 cm−1; H-NMR (CDCl3): l 4.14 (s, 3H).
Anal. Calc. for C6H3Cl2N3O4: C, 28.60; H, 1.20; N,
16.67. Found: C, 28.87; H, 1.31; N, 16.56%.
A solution of 15 (87 mg, 0.25 mmol) and CH3ONa
(14 mg, 0.26 mmol) in MeOH (1.2 mL) was refluxed for
3 h. The reaction mixture was evaporated under va-
cuum to one half of the initial volume and cooled to
5 °C. The precipitate was collected by filtration,
washed with H2O (1 mL) and dried under vacuum to
give 32 mg (50%) of 5 as a colorless solid. IR (KBr):
720, 1042, 1091, 1283, 1307, 1376, 1440, 1471, 1533,
1659, 3030, 3225, 3340 cm−1; UV (EtOH): umax (m) 254
6.1.10. 2-Methoxycarbonyl-4,6-dichloro-5-
aminopyrimidine (18)
A mixture of 17 (449 mg, 1.78 mmol) and Raney
nickel (80 mg) in EtOH (40 mL) was hydrogenated in a
Parr apparatus (50 psi of hydrogen) for 3.5 h. The
resulting suspension was filtered through silica gel and
evaporated under vacuum. Flash chromatography of
the residue on silica gel (from 50 to 60% EtOAc in
C6H14) gave 235 mg (59%) of 18 as a light yellow solid.
Rf 0.42 (C6H14–EtOAc, 1:1); IR (KBr): 742, 983, 1181,
1222, 1341, 1365, 1442, 1511, 1606, 1717, 3301, 3461
1
nm (8577); H-NMR (DMSO-d6): l 3.34 (s, 4H), 3.87
(s, 3H), 4.39 (d, J=6.18 Hz, 2H), 5.19 (t, J=6.18 Hz,
1H), 6.26 (s, 2H); HRMS (FAB) Calc. for
C9H12ClN5O2: 258.0758. Found: 258.0759.
cm−1; UV (EtOH): umax (m) 301 nm (12932); H-NMR
1
6.1.8. 2-Hydroxymethyl-4,6-dichloro-5-nitropyrimidine
(16)
(CDCl3): l 4.06 (s, 3H), 5.03 (s, 2H). Anal. Calc. for
C6H5Cl2N3O2: C, 32.46; H, 2.27; N, 18.93. Found: C,
32.55; H, 2.47; N, 18.90%.
To a solution of 13 (1.42 g, 5.34 mmol) in CH2Cl2
(40 mL) at −78 °C was added di-isobutylaluminum
hydride (1M in C6H5CH3, 15 mL, 15.0 mmol) drop-
wise. The reaction mixture was stirred at −78 °C for
15 min, treated with isopropyl alcohol (1.5 mL), diluted
with CH2Cl2 (40 mL), washed with saturated aq. solu-
tions of potassium sodium tartrate and NaCl, dried
over Na2SO4 and evaporated under vacuum. Flash
6.1.11. 2-Methoxycarbonyl-4-chloro-5-amino-6-
methoxypyrimidine (19)
A solution of 18 (390 mg, 1.76 mmol) in MeOH (25
mL) containing CH3ONa (90 mg, 1.67 mmol), was kept
at r.t. for 30 min, diluted with EtOAc, washed with
brine, dried over Na2SO4, and evaporated under