Dendron-Encapsulated Polyoxometalate
A R T I C L E S
Twelve equiv of 1‚Br (6.43 × 10-5 mol ) 62.5 mg) dissolved in
trichloromethane (20 mL) were added, and the encapsulated cluster
was transferred into the organic phase by gentle shaking of the biphasic
solution. The organic phase was separated, evaporated, and dried for 3
days at 3 mbar (20 °C). Anal. Calcd. for (C52H60NO12)12[(Mn(H2O))3-
(SbW9O33)2]‚15H2O: C, 47.05; H, 4.59; N, 1.00; O, 22.72. Found: C,
47.45; H, 4.79; N, 1.06; O, 23.13. The molar weight of the SEC was
calculated according to the results of the elemental analysis to be 15 778
g/mol. Spectral data of SEC: UV-vis (CHCl3); λ [nm]: 387, 283,
243. IR (KBr, cm-1): 3442, 3091, 3003, 2959, 2938, 2839, 1600, 1460,
1431, 1376, 1347, 1323, 1300, 1205, 1156, 1055, 1019, 943, 869, 836,
775, 752, 713, 683, 514, 464, 438. The density of the SEC was
determined with a DMA 5000 density meter (solvent CHCl3) to be
F ) 1.82 g/cm3.
Analytical Ultracentrifugation. Analytical ultracentrifugation was
carried out with a Beckman Optima XL-I (Beckman Instruments, Palo
Alto, USA) analytical ultracentrifuge. The centrifuge was equipped with
an integrated scanning UV-vis absorption and Rayleigh interference
optical system. Sedimentation velocity experiments were performed
in toluene at a rotational speed of 60 000 rpm. The sedimentation
coefficient was determined to be s ) 6.34 ( 2.9 s. The calculated
diameter of the SEC is d ) 2.67 ( 0.54 nm.
From the movement of the sedimentation boundary, the sedimenta-
tion coefficient, s, was determined according to ln(rb/rm) ) sω2t, where
rb and rm are the radial positions of the boundary and the meniscus,
respectively, and ω is the radial velocity. A plot of ln(rb) versus time
gave a straight line of slope sω2. The diffusion coefficient, D, is
determined from the spreading of the sedimentation boundary. A plot
of time, t, versus [cp/(dc/dr)]2 gave a straight line of slope D/4π. Here,
cp is the concentration in the plateau region and dc/dr is the
concentration gradient at the boundary. The hydrodynamic particle
diameter, R, was determined according to d2 ) 18ηs/(Fp - Fs), were η
is the solvent viscosity and Fp and Fs are the densities of the particles
and solvent, respectively. The molecular weight was determined from
the Swedberg equation M ) sRT/D(1 - νjp), where νj is the experi-
mentally determined partial specific volume, and F, the solvent density.
The values of s and D were determined at different concentrations and
extrapolated to zero concentration.26
Crystal Structure Determination. Diffraction experiments were
performed on a STOE IPDS imaging plate system with Mo-KR
radiation (λ ) 0.71073 Å) and with corrections for absorption (using
DECAY/ABSCOR). The structures were solved by direct methods using
SHELXS 97 and refined with SHELXL 97 (on F2) by full-matrix least
squares. All metal atoms were refined anisotropically; the oxygen atoms
were refined isotropically. As usual in polyoxometalate chemistry, we
found little disorder in the range of counterions and water molecules.
Details of the crystal data collection, processing and structure analysis
and refinement are summarized in Table 1. Further information, such
as positional and thermal parameters, can be obtained from the cif-
files presented in the Supporting Information.
relevant bonding characteristics. In contrast, preliminary model inves-
tigations on smaller polyoxotungstate fragments (WO42-) showed that
extended basis sets (e.g., a triple-ú valence TZV(P) set, while operating
the aforementioned functionals) tend to overestimate the ionic W-O
bonding character, yielding unreasonably high Mulliken and Lo¨wdin
point charges. On the other hand, replacing the Perdew86 correlation
functional by more accurate but computationally more expensive
functionals, such as the Lee-Yang-Parr (LYP) correlation functional,
did not result in significant Mulliken and Lo¨wdin point charge
differences.31
Molecular Dynamics Simulations. MD simulations were performed
with the HyperChem program suite.32
Molecular models of dendron 1 were readily obtained from Amber94
force field calculations. With respect to the highly flexible nature of
the hydrophobic benzyl ether branches, the conformational space of 1
was scanned on the basis of the Metropolis search algorithm.33 The
conformational analysis yielded some 100 unique conformers, the
energetically most favorable of which was subsequently used in a single-
point DFT calculation, followed by population analysis.
Atomic coordinates and partial charges of 2a were obtained from a
DFT geometry optimization of a C3h-symmetric model structure, on
the basis of the crystallographic atomic positions of 2b. A customized
Amber94 force field was used to model atomic interaction potentials.
The atomic positions of 2a were fixed during simulation runs. An
energetically equilibrated starting configuration of 3 was obtained by
performing several high-temperature MD simulation runs (1200 K,
5-10 ps) that were interrupted by short cooling cycles (0 K, 1-2 ps).
The final MD simulation included a heating period (10 ps), allowing
the molecular ensemble to reach a final temperature of 300 K starting
from 0 K, followed by a 100 ps MD simulation run at constant (total)
energy. During simulation, the coordinate shifts of dendrons 1 were
recorded at 1-fs intervals.
Solvent Accessible Surface (SAS). SAS calculations were performed
with the program MSMS V2.53.34 SAS values were computed on the
basis of atomic coordinates of 3 that were extracted from a 100-ps
trajectory at constant (10-ps) time steps (T ) 300 K). Molecules were
represented as a set of overlapping spheres, each having the van der
Waals radius of its constituent atom. The SAS of a molecule is the
trajectory of the center of a spherical probe of radius rp (which
represents an imaginary solvent molecule) rolling over the van der
Waals surface of the molecule.35
Small-Angle Neutron Scattering (SANS). SANS experiments were
performed at the KWS1 diffractometer of the research center in Ju¨lich.36
The concentration of the sample was 41 mg/mL, which corresponds to
a volume fraction 0.0225. The measurements were performed with a
(31) For recent investigations on the effect of different methods, basis sets, and
functionals on the partial charges of a hypothetical WO2(OH)2 molecule,
see: Judd, D. A.; Nettles, J. H.; Nevins, N.; Snyder, J. H.; Liotta, D. C.;
Tang, J.; Ermolieff, J.; Schinazi, R. F.; Hill, C. L. J. Am. Chem. Soc. 2001,
123, 886. The results in this paper (see Table 1) also support our initial
finding that Hartree-Fock-type calculations overestimate the ionic bond
character of polymetalate species.
(32) Hyperchem Release 6.01; HyperCube Inc.: Gainesville, FL, 2000.
(33) Metropolis, N.; Rosenbluth, A. W.; Rosenbluth, M. N.; Teller, A. H.; Teller,
E. J. Chem. Phys. 1953, 21, 1087.
(34) Sanner, M. F.; Spehner, J.-C.; Olson, A. J. Biopolymers 1996, 38, 305.
(35) Tabulated van der Waals radii were taken from the website
follows: C, 1.70; H, 1.20; N, 1.55; O, 1.52 Å. For the other elements,
tabulated ionic radii were employed because of the lack of substantiate
van der Waals radii: Mn(II), high-spin, octahedral, 0.97 Å; Sb(III), 0.90
Å; W(VI), octahedral, 0.74 Å. The use of ionic radii is, strictly speaking,
incorrect in terms of the mathematical definition of the SAS; in practice,
however, the affected atoms are hidden in the POM framework and, thus,
do not contribute to the SAS. The most critical value is the (uncertain) van
der Waals radius of oxygen atoms belonging to the POM that was chosen
here to equal the well-established value for organic compounds. As a result
of the fact that the coordinates of the POM are fixed during MD simulation
runs, internal cavities originate from different packing arrangements of the
dendron shell, which consists of purely organic ligands. The (inadequate)
representation of the POM surface topology adds a constant factor to the
calculated SAS values, and the error thus introduced is negligible.
DFT Calculations. DFT investigations on the polyoxometalate
cluster (2b) and the amphiphilic dendrons (1) were performed using
the TURBOMOLE package27 employing the Becke88 exchange and
the VWN/Perdew86 and correlation functionals and split valence basis
sets incorporating polarization functions (SV(P)).28 Relativistic effective
core potentials (ECPs) were applied for Sb,29 and W.30 This chosen set
was found to accurately model the cluster anion’s geometry and the
(26) Ralston, G. Introduction to Analytical Ultracentrifugation; Beckman
Instruments: California, 1993.
(27) (a) Treutler, O.; Ahlrichs, R. J. Chem. Phys. 1995, 102, 346. (b) Eichhorn,
K.; Treutler, O.; O¨ hm, H.; Ha¨ser, M.; Ahlrichs, R. Theor. Chem. Acc. 1997,
97, 119.
(28) (a) Becke, A. D. Phys. ReV. A 1998, 38, 3098. (b) Perdew, J. P. Phys. ReV.
B 1986, 33, 8822.
(29) Bergner, A.; Dolg, M.; Ku¨chle, W.; Stoll, H.; Preuss, H. Mol. Phys. 1993,
80, 1431.
(30) Andrae, D.; Ha¨ussermann, U.; Dolg, M.; Stoll, H.; Preuss, H. Theor. Chim.
Acta 1990, 77, 123.
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J. AM. CHEM. SOC. VOL. 124, NO. 35, 2002 10495