A R T I C L E S
Shearer et al.
4-tert-Butylpyridine was used to determine pyridine exchange rates from
1 and 2. In this case there is negligible unpaired spin density on the
tert-butyl group carbons so that the exchange rate can be determined
by:
scattering theory. Our interest was primarily in the Fe-ligand bond
lengths and disorder, and these parameters were virtually the same in
the Fourier-filtered and -unfiltered fits. The least-squares error index
ꢀ2 is defined as:
T2PPM-1 ) π(∆νcplx - ∆νsolv)PM-1 - T2O ) kex
(6)
ꢀ2 ) [nidp(nidp - np)] × average{[(ydata - ycalc)/σdata]}2 (10)
The parameters ∆Hq and ∆Sq and Ea were then determined through
standard procedures.20
where nidp is the number of independent25 points in the data (ydata
)
Fourier-filtered k3ø), np is the number of refined parameters, and σdata
is the uncertainty attributed to the (Fourier-filtered) XAS spectrum,
which is linearly interpolated from (k‚Å, σdata‚Å3) ) (2.2, 0.19), (4.0,
0.26), (8.0, 0.26), (10.0, 0.42), (13.0, 0.88), (14.3, 0.56).33a Using criteria
established by the International Workshops on Standards and Criteria
in XAFS,25 any model that gives shell-specific ꢀs2 values within 1 of
the minimum achieved value should be considered a model consistent
with the EXAFS data, although models with lower ꢀs2 values may be
considered more likely. The reported parameter uncertainties were
determined in the recommended manner by fixing the parameter in
question at a series of values and refining all other parameters (that
were refined in the original fit) to determine the variation that causes
an increase in ꢀ2 by 1. The allowed variation range was generally
slightly asymmetric; the larger of the allowed positive or negative
variation from the best-fit value is reported as the ( value.
XAS Sample Preparation and Data Collection. Complex 2 was
dissolved in either CH2Cl2, MeCN, or MeOH (5-25 mg in ∼300 µL),
injected into an aluminum sample holder between two pieces of
translucent electrical tape (3M, no. 1205, Minneapolis, MN), and
quickly frozen in liquid nitrogen. Data were collected at the National
Synchrotron Light Source (Brookhaven National Laboratories, Upton,
NY) on beamline X-9B using a focused Si(111) double-crystal
monochromator, a low-angle nickel mirror for harmonic rejection, and
a 13-element Ge solid-state fluorescence detector (Canberra). A helium
Displex cryostat was used to keep the samples at a constant 77 K
throughout the data collection. X-ray energies were calibrated by
simultaneous measurement of the absorption spectrum of Fe foil (first
inflection point assigned to 7111.2 eV).21 The spectra were measured
in 5 eV increments in the preedge region (6960-7100 eV), 0.5 and
1.5 eV increments in the edge region (7100-7132 and 7132-7171
eV), and 3 eV increments in the EXAFS region (7171-7910 eV).
XAS Data Analysis. The XAS baseline was normalized using a
three-region cubic-spline function. The EXAFS region of the XAS was
plotted against the wavevector k:
Bond valence sums analysis (BVS) of the EXAFS data was
performed according to eq 11:
BVS )
sij
(11)
(12)
∑
where sij is the valence of an individual bond described by:
sij ) exp[(Ro - Rij)/0.37]
k ) π[8me(E - Eo)]1/2/h
(7)
where Eo ) 7125 eV. Simulations used the single-scatterer (SS) EXAFS
equation:
where Ro is the length of a valence unit and Rij is the experimentally
determined bond length. The values used for Ro are: 1.759 Å for Fe-
O, 1.831 Å for Fe-N, and 2.151 Å for Fe-S.33a
#shells
øcalc
)
ni fiki-1ri-2 exp(-2σi2ki2) sin(2kiri + Ri)
(8)
∑
X-ray Crystallography of 2-NCS. X-ray-quality crystals were
grown by slowly diffusing diethyl ether into a THF solution of 2-NCS
at -35 °C. A suitable single crystal was immersed in Paratone 8277
oil, mounted on a glass capillary, and immediately placed under a stream
of cold dinitrogen gas. X-ray data was collected at 130 K using a Nonius
Kappa CCD diffractometer. The structure was solved using direct
methods and refined using SHELEX 97.26 All hydrogen atoms were
placed in an idealized geometry and refined using a riding model.
Crystallographic data for 2-NCS are listed in Table 1.
i)1
where ni is the number of scatterers in the ith shell, ri is their average
distance from the metal center, σi is the variability (disorder) in that
shell, and ki is defined as:
ki ) π[8me(E - (7125 eV + ∆Ei))]1/2/h
(9)
where ∆Ei is the difference in energy between the nominal edge and
the true ionization energy of that shell. This parameter fixed at ∆Ei )
-0.5 eV based on previous studies of similar complexes with known
structures.22 The amplitude and phase functions, generated by FEFF
7.0123 simulations, were the same as we used previously.22 We
determined the baseline and edge height from simulations of the entire
XAS (including Gaussian simulations of preedge peaks and first-
coordination sphere fits to the EXAFS region) and then performed
subsequent fits only on the EXAFS region to investigate alternative
coordination models and the effects of including outer sphere scatterers.
For fits that we report in this paper, we used weighted Fourier-filtered
fits of k3ø (FT: 1.0-14.3 Å; BT: r′ ) 0.8-2.0 Å).33a We also
performed (but do not report) fits to unfiltered k2ø in which the outer-
sphere atoms were modeled as Fe-C shells at ca. 2.9, 3.4, and 4 Å;
only the distances from the first of these shells corresponded to distances
seen in crystal structures, while the longer distances probably were
artifacts due to modeling multiple-scattering EXAFS using single-
Results and Discussion
Reactivity of Five-Coordinate [Fe(III)(S2Me2N3(Pr,Pr))]+
(1) and [Fe(III)(S2Me2N3(Et,Pr))]+ (2) toward a Sixth Ligand.
Recent calculations by Richards and co-workers indicate that
the metal-amide bond in NHase has significant double-bond
character between the nitrogen and carbon, and is best repre-
sented as an imido-metal bond (Scheme 2).27 This is supported
by modeling studies done in our group which show that the
spectroscopic and electronic properties of NHase can be nicely
reproduced with six-coordinate metal complexes containing
imine nitrogens and cis-thiolates.28 [Fe(III)(S2Me2N3(Pr,Pr))]+
(24) Ankudinov, A. L.; Ravel, B.; Rehr, J. J.; Conradson, S. D. Phys. ReV. B.
1998, 58, 7565-7576.
(25) Bunker, G., Hasnain, S., Sayers, D. In X-ray Absorption Fine Structure;
Hasnain, S. S., Ed.; Ellis Horwood: New York, 1991; pp 751-770.
(26) (a) Otinowski, Z.; Minor, W. Methods Enzymol. 1996, 276, 307-326. (b)
Blessing, R. H. Acta Crystallogr. Sect. A 1995, 51, 33. (c) Altomare, A.;
Cascarano, G.; Giacovazzo, C.; Burla, M. C.; Polidori, G.; Camalli, M. J.
Appl. Crystallogr. 1994, 27, 435-442. (d) Sheldrick, G. M. SHELEX97
University of Gottingen.
(20) Moore, J. W.; Pearson, R. G. Kinetics and Mechanism: A Study of
Homogeneous Chemical Reactions, 3rd ed; John Wiley & Sons: New York,
1981; Chapter 5.
(21) Bearden, J. A.; Burr, A. F. CRC Handbook, 60th ed.; Weast, R. C., Astle,
M. J., Eds.; CRC Press: Boca Raton, Fl. 1979. p E-193.
(22) Scarrow, R. C.; Stickler, B. S.; Ellison, J. J.; Shoner, S. C.; Kovacs, J. A.;
Cummings, J. C.; Nelson, M. J. J. Am. Chem. Soc. 1998, 120, 9237-9245.
(23) Ankudinov, A. L.; Rehr, J. J. Phys. Rev. 1997, B56, R1712-R1715.
(27) Boone, A. J.; Cory, M. G.; Scott, M. J.; Zerner, M. C.; Richards, N. G. J.
Inorg. Chem. 2001, 40, 1837-1845.
9
11420 J. AM. CHEM. SOC. VOL. 124, NO. 38, 2002