Synthesis of Intracellular Signalling Molecules
6207 6214
gel. NMR spectra were recorded on either JEOL EX-270 or Varian Mer-
cury EX-400 NMR spectrometers. 1H chemical shifts were measured in
ppm relative to tetramethylsilane (TMS). 31P chemical shifts were meas-
ured in ppm relative to external 85% H3PO4 and are positive when
downfield from this reference. Melting points (uncorrected) were deter-
mined with a Reichert Jung Thermo Galen Kofler Block. Microanalysis
was carried out by the University of Bath microanalysis service. Optical
rotations were measured with an Optical Activity Ltd. AA-10 polarime-
ter, and [a]D values are given in 10À1 degcm2 gÀ1. Fast atom bombardment
(FAB) mass spectra were recorded at the Mass Spectrometry Service of
the University of Bath, with 3-nitrobenzyl alcohol (NBA) as matrix. Ion-
exchange chromatography was performed on a LKB-Pharmacia medium-
pressure ion-exchange chromatograph on Q Sepharose Fast Flow with
gradients of triethylammonium hydrogen carbonate (TEAB) as eluent.
Column fractions containing inositol polyphosphates were assayed for
total phosphate by a modification of the Briggs test.[24]
Isolation of dl-(2’S*,3’S*,2’’R*,3’’S*)-4,5-O-(2’,3’-dimethoxybutane-2’,3’-
diyl)-1,2,3-O-(2’’-methoxybutane-2’’-yl-3’’-ylidene)-myo-inositol [(Æ)-4]:
Trimethyl orthoformate (200 mL), butanedione (50 mL, 570 mmol) and
(Æ)-camphorsulphonic acid (1 g) were added to a stirred suspension of
myo-inositol (50.0 g, 277 mmol) in MeOH (500 mL). The mixture was
heated at reflux for 28 days and then allowed to cool. The suspension
was filtered, and the filtrate was washed with MeOH (200 mL) and al-
lowed to dry. The resulting white solid (50 g) was suspended in propan-2-
ol (600 mL) and the mixture was heated at reflux for 2 h with vigorous
stirring. The hot suspension was filtered, and as the filtrate cooled to
room temperature, a white solid (5 g) precipitated. This was found to
consist of a 4:1 mixture of (Æ)-4 and 2, as judged by 1H NMR spectros-
copy. Crystallisation of this solid from boiling acetonitrile (250 mL) gave
alcohol (Æ)-4 (3.42 g, 3.4%) as colourless needles: Rf 0.60 (CH2Cl2/ace-
tone 2:1); the needles undergo a phase change above 1658C to plates,
which then sublime, with softening, above 2708C.
1H 1H COSY (400 MHz, [D5]pyridine, TMS): d = 1.37, 1.45, 1.47, 1.57
(4îs, 12H; 4îCH3), 3.20, 3.33, 3.40 (3îs, 9H; 3îOCH3), 4.06 (dd, J =
12.0, 7.0 Hz, 1H; H-5), 4.26 (m, D2O exch. gives dd, J = 7.0, 1.5 Hz, 1H;
H-6), 4.43 (brs, 1H; H-1), 4.60 (ddd, J = 5.5, 4.7, 0.8 Hz, 1H; H-3), 4.78
(dd, J = 12.1, 4.7 Hz, 1H; H-4), 5.02 (brs, D2O exch; 1 H; OH-6), 5.08
(dd, J = 5.5, 1.6 Hz, 1H; H-2) ppm; 13C NMR (100 MHz, [D5]pyridine):
d = 18.07, 18.14, 18.91, 18.94 (4îCH3), 47.64, 47.77, 48.30 (3îOCH3),
71.08 (CH), 72.36 (2îCH), 74.24, 74.69, 78.56 (3îCH), 99.40, 99.45,
99.79 (3îCq), 107.62 (C-3’’); MS (+ve ion FAB) 345 (70%)
[MÀOCH3]+, 255 (40%), 173 (50%), 101 (100%); elemental analysis
calcd (%) for C17H28O9 (376.40): C 54.25, H 7.50; found: C 54.3, H 7.48.
X-ray crystallography of (Æ)-4: A crystal of approximate dimensions
0.03î0.01î0.075 mm was used for data collection. Crystal data:
C34H56O18, Mr = 752.79, monoclinic, a = 11.840(2), b = 12.176(2), c =
13.606(2) ä, b = 113.63(2)8, U = 1797.0(5) ä3, space group P21/c, Z =
2, 1calcd = 1.391 gcmÀ3, m(MoKa) = 0.113 mmÀ1, F(000) = 808. Crystallo-
graphic measurements were made at 293(2) K on a Nonius Kappa CCD
diffractometer in the range 1.88<q<27.49o. Data (23153 reflections)
were corrected for Lorentz and polarisation and also for absorption.
[SORTAV program].
In the final least squares cycles all atoms were allowed to vibrate aniso-
tropically. Hydrogen atoms were included at calculated positions where
relevant. Analysis of the gross structure revealed that molecules interact
through hydrogen bonding between the alcoholic proton H6 of one mole-
cule and the proximate O3 of a lattice neighbour, to generate one-dimen-
sional polymers.
The solution of the structure (SHELXS-86)[25] and the refinement
(SHELXL-97)[26] converged to a conventional [that is, based on 2580 F2
data with Fo >4s(Fo)] R1 = 0.0469 and wR2 = 0.1059. Goodness of fit
= 0.938. The maximum and minimum residual densities were 0.281 and
À0.308 eäÀ3, respectively. The asymmetric unit (shown in Figure 1) along
with the labelling scheme used was produced by using ORTEX.[27]
1d-3-O-[(R)-(À)-Acetylmandelyl]-1,6:4,5-bis-O-(2,3-dimethoxybutane-
2,3-diyl)-myo-inositol (5) and 1d-1-O-[(R)-(À)-acetylmandelyl]-3,4:5,6-
bis-O-(2,3-dimethoxybutane-2,3-diyl)-myo-inositol (6):
A solution of
DCC (5.16 g, 25.0 mmol) in dry CH2Cl2 (50 mL) was added dropwise at
À788C over 3 h with stirring to a mixture of (Æ)-3ab (9.62 g, 23.5 mmol),
DMAP (50 mg, 0.41 mmol) and (R)-(À)-acetylmandelic acid (4.85 g,
25.0 mmol) in dry CH2Cl2 (200 mL). The resulting mixture was stirred
overnight at room temperature and then filtered through a bed of Celite,
which was then washed thoroughly with CH2Cl2 (2î50 mL). The com-
bined filtrate and washings were evaporated under reduced pressure to
give a foam. The individual diastereoisomers were separated by flash
chromatography on silica (CHCl3/acetone 15:1 and then EtOAc/toluene
2:3) to give the less polar diastereoisomer 5 (5.04 g, 36.5%) and then the
more polar diastereoisomer 6 (5.03 g, 36.5%) as waxy solids. Both dia-
stereoisomers were recrystallised from hexane. Compound 5 (m.p. 101
1038C), 6 (m.p. 119 1228C).
CCDC-199689 contains the supplementary crystallographic data for this
ac.uk/conts/retrieving.html (or from the Cambridge Crystallographic
Data Centre, 12 Union Road, Cambridge CB2 1EZ, UK; fax:
(+44)1223-336033; or deposit@ccdc.cam.uk).
dl-1,6:4,5-Bis-O-(2,3-dimethoxybutane-2,3-diyl)-myo-inositol [(Æ)-3ab]:
A mixture of methanol (400 mL), camphorsulfonic acid (1 g) and tri-
methyl orthoformate (100 mL) was stirred vigorously at room tempera-
ture. myo-Inositol (25 g, 138.5 mmol) was added to the stirred solution,
followed by butanedione (25 mL, 285 mmol), and the mixture was heated
under reflux for 41 h. The cherry red suspension was allowed to cool and
was then filtered through a large sinter funnel. The precipitate was
washed with methanol and then with diethyl ether to leave the symmetri-
cal bis(butane-2,3-diacetal) 2 [(14.75 g, 26%) Rf = 0.37, (CH2Cl2/acetone
3:1)] as a white solid. The red mother liquor and combined washings
were concentrated and then purified by flash chromatography (CH2Cl2/
acetone 3:1) to give a second product (Rf = 0.34) as a foam. Addition of
ether to the foam gave a white solid, which was recrystallised from ace-
tone/hexane to give pure dl-1,6:4,5-bis-O-(2,3-dimethoxybutane-2,3-
diyl)-myo-inositol [(Æ)-3ab] (11.15 g, 20%) from acetone/hexane; m.p.
215 2188C.
1H 1H COSY (400 MHz, CDCl3): d = 1.29, 1.30, 1.32, 1.33 (4îs, 12H;
4îCH3), 2.70 (br, D2O exch, 1H; OH-3), 2.94 (br, D2O exch, 1H; OH-
2), 3.24 (s, 3H; OCH3), 3.27 (s, 6H; 2îOCH3), 3.29 (s, 3H; OCH3), 3.51
(dd, J = 2.6, 9.9 Hz, 1H; H-3), 3.61 (dd, J = 9.9, 9.9 Hz, 1H; H-5), 3.64
(br, D2O exch. gives dd, J = 9.9, 2.7 Hz, 1H; H-3), 3.92 (dd, J = 9.9,
9.9 Hz, 1H; H-4 or H-6), 4.06 (dd, J = 9.9, 9.9 Hz, 1H; H-4 or H-6), 4.11
(br, exch. gives dd, J = 2.7, 2.7 Hz, 1H; H-2) ppm; 13C NMR (100 MHz,
CDCl3): d = 18.07, 18.12, 18.17 (4îCH3), 48.20, 48.27, 48.41 (4îOCH3),
65.93, 68.21, 69.35, 70.13, 70.28, 70.64 (6îCH), 99.15, 99.33, 99.88, 100.39
(4îCq of BDA) ppm; elemental analysis calcd (%) for C18H32O10
(408.45): C 52.93, H 7.90; found: C 52.5, H 7.95.
Compound 5: Rf = 0.22 (CHCl3/acetone 15:1); [a]2d0 = +174 (c = 0.5 in
CHCl3); 1H NMR (400 MHz, CDCl3): d = 1.27 (s, 3H; CH3), 1.29 (s,
3H; CH3), 1.30 (s, 6H; 2îCH3), 2.17 (s, 3H; COCH3), 3.22, 3.25, 3.26,
3.27 (4îs, 12H; 4îOCH3), 3.51 (dd, J = 2.5, 9.9 Hz, 1H; H-1), 3.67 (dd,
J = 9.8, 9.8 Hz, 1H; H-5), 4.06 (dd, J = 10.1, 10.1 Hz; 1 H; H-4 or H-6),
4.12 4.20 [m, 2H; H-2 and (H-4 or H-6)], 4.84 (dd, J = 2.7, 9.7 Hz, 1H;
H-3), 5.89 (s, 1H; acetylmandelyl CH), 7.35 7.40 (m, 3H; ArH), 7.47
7.52 (m, 2H; ArH) ppm; 13C NMR (100 MHz, CDCl3): d = 18.01, 18.07,
18.12 (4îCH3), 21.10 (CH3CO), 48.00, 48.42, 48.47 (4îOCH3), 65.46,
67.16, 68.25, 68.42, 68.60, 72.87, 75.47 (6îmyo-inositol ring carbons and
1îCH acetylmandelate), 99.09, 99.33, 99.89, 100.37 (4îCq), 127.88,
129.00, 129.63 (3îCH, Ar), 133.60 (Cq, Ar), 167.81, 171.24 (2îCq carbon-
yl) ppm; elemental analysis calcd (%) for C28H40O13 (584.62): C 57.53, H
6.90; found: C 57.9, H 7.13.
Compound 6: Rf = 0.12 (CHCl3/acetone 15:1); [a]2d0 = À210 (c = 0.5 in
CHCl3); 1H NMR (400 MHz, CDCl3): d = 1.01, 1.22, 1.26, 1.30 (4îs,
12H; 4îCH3), 2.17 (s, 3H; COCH3), 2.72, 3.22, 3.23, 3.25 (4îs, 12H; 4î
OCH3), 3.53 (dd, J = 2.4, 10.1 Hz, 1H; H-3), 3.61 (dd, J = 9.8, 9.8 Hz,
1H; H-5), 4.05 (dd, J = 9.8, 9.8 Hz, 1H; H-4 or H-6), 4.06 (dd, J = 9.8,
9.8 Hz, 1H; H-4 or H-6), 4.23 (dd, J = 2.4, 2.4 Hz, 1H; H-2), 4.91 (dd, J
= 3.0, 10.7 Hz, 1H; H-1), 5.97 (s, 1H; acetylmandelyl CH), 7.34 7.39 (m,
3H; ArH), 7.46 7.51 (m, 2H; ArH) ppm; 13C NMR (100 MHz, CDCl3):
d = 17.87, 17.96, 18.05, 18.12 (4îCH3), 21.10 (CH3CO), 47.79, 48.40,
48.42, 48.48 (4îOCH3), 65.45, 66.96, 68.34, 68.94, 68.98, 72.44, 74.91 (6î
myo-inositol ring carbons and 1îCH acetylmandelate), 99.13, 99.25,
99.59, 100.40 (4îCq), 128.43, 128.83, 129.47 (CH, Ar), 133.62 (Cq, Ar),
168.42, 170.56 (Cq, carbonyl) ppm; elemental analysis calcd (%) for
C28H40O13 (584.62): C 57.53, H 6.90; found: C 57.9, H 7.05.
6211
Chem. Eur. J. 2003, 9, 6207 6214
¹ 2003 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim