B. Liberek et al. / Carbohydrate Research 340 (2005) 143–147
147
Table 8. Short contacts for 7
D–H
d(D–H)
d(Hꢃ ꢃ ꢃA)
2.45
2.49
<DHA
d(Dꢃ ꢃ ꢃA)
3.242(5)
3.377(7)
A
Symm. op.
C-4–H-4A
C-19–H-19A
0.96
0.96
140
153
O22
O34
[1 ꢁ x,y,z]
[1 + x,y,z]
1.2. Methyl 4,6-di-O-acetyl-3-azido-2,3-dideoxy-a-D-
lyxo-(2), -b-D-xylo- (3), -a-D-xylo- (4), and -b-D-lyxo-
hexopyranosides (5)
In the crystal, 7 adopts a 4C1 chair conformation with
puckering parameters Q = 0.512(4) and H = 6.8(4)ꢁ.7,8
The values of bond lengths and angles determined in this
work for 7 agree well with the expected ones.9,10 All H
atoms were placed geometrically and refined using a rid-
These were synthesized as previously reported.1
˚
ing model with C–H = 0.96A and Uiso(H) = 1.2 Ueq(C)
˚
(C–H = 0.96A and Uiso(H) = 1.5 Ueq(C) in the case of
the methyl H atoms).
1.3. Methyl 3-azido-2,3-dideoxy-a-D-xylo-hexopyrano-
side (6)
A mixture of 4 (2.84g, 8.1mM) and 0.1M NaOMe in abs
MeOH (35mL) was stirred for 0.5h at rt. The end of
deacetylation was verified by TLC (solvent A). The solu-
tion was then neutralized with Dowex-50W · 8 (H+) ion-
exchange resin and filtered, and the filtrate was evapo-
rated to give 6 (99%, solid); Rf 0.39 (solvent B).
Supplementary data
Full crystallographic details, excluding structure fea-
tures, have been deposited (deposition no. CCDC
247410) with the Cambridge Crystallographic Data
Centre. These data may be obtained, on request, from
The Director, CCDC, 12 Union Road, Cambridge,
CB2 1EZ, UK (tel.: +44 1223 336408; fax: +44 1223
336033; e-mail: deposit@ccdc.cam.ac.uk or <www:http:
1.4. Methyl 3-azido-2,3-dideoxy-4,6-di-O-p-tolylsulfonyl-
(7) and 6-O-p-tolylsulfonyl-a-D-xylo-hexopyranosides (8)
To a solution of 6 (1.39g, 6.84mM) in CH2Cl2 (50mL),
dry pyridine (2.8mL) and p-toluenesulfonyl chloride
(2.61g, 13.7mM) were added. The mixture was stirred
at rt for 24h. The end of the reaction was determined
by TLC (solvent C). The mixture was then diluted with
Et2O (50mL), and the precipitated salts were filtered
off. The filtrate was concentrated and diluted with CHCl3.
The organic solution was washed with satd NaHCO3 and
water and dried over Na2SO4. Concentration under re-
duced pressure led to the crude product, which was chro-
matographed (solvent D) to give first 7 (44%, mp 138–
Acknowledgements
This research was supported by the Polish State Com-
mittee for Scientific Research under grants DS/8361-4-
0134-4 and BW/8000-5-0200-4.
140ꢁC); ½aꢂ20 +58 (c 1, CHCl3); Rf 0.81 (solvent D). Anal.
References
D
Calcd for C21H25N3O8S2: C, 49.31; H, 4.93; N, 8.21; S,
12.54. Found: C, 49.68; H, 4.95; N, 8.10; S, 12.50.
1. Liberek, B.; Da˛browska, A.; Frankowski, R.; Matu-
szewska, M.; Smiatacz, Z. Carbohydr. Res. 2002, 337,
1803–1820.
2. Liberek, B.; Sikorski, A.; Melcer, A.; Konitz, A. Carbo-
hydr. Res. 2003, 338, 795–799.
20
D
Eluted second was 8 (36%, syrup); ½aꢂ +102 (c 1,
CHCl3); Rf 0.44 (solvent D). Anal. Calcd for
C14H19N3O6S: C, 47.05; H, 5.36; N, 11.76; S, 8.97.
Found: C, 47.38; H, 5.13; N, 11.52; S, 8.70.
3. Sheldrick, G. M. Acta Crystallogr., Sect. A 1990, 46, 467–
473.
4. Sheldrick, G. M. SHELXL-97; Program for the Refinement
of Crystal Structures; University of Goetingen: Goetingen,
1997.
1.5. Description of the crystal structure
5. Johnson, C. K. ORTEP II; Report ORNL-5138; Oak Ridge
National Laboratory: Oak Ridge, TN, 1976.
6. Motherwell, S.; Clegg, S. PLUTO-78; Program for Drawing
Crystal and Molecular Structure; University of Cambridge:
Cambridge, 1978.
7. Nardelli, M. Comput. Chem. 1983, 7, 95–97.
8. Nardelli, M. J. Appl. Crystallogr. 1995, 28, 659.
9. Allen, F. H.; Kennard, O.; Watson, D. G.; Brammer, L.;
Orpen, A. G.; Taylor, R. J. Chem. Soc., Perkin Trans. 2
1987, S1–19.
The crystal structure of 7 was solved by the SHELXS pro-
gram and refined by SHELXL-97.3,4 A summary of crys-
tallographic data, data collection and structure
refinement is presented in Table 5. A view of 7 and its
molecular packing in the crystal are presented in Figures
1 and 2, respectively.5,6 The coordinates of atoms and
their isotropic temperature factors are presented in
Table 6. A selection of important geometric parameters
of 7 is tabulated in Table 7, and short contacts are sum-
marized in Table 8.
10. Cremer, D.; Pople, J. A. J. Am. Chem. Soc. 1975, 97,
1354–1358.