2206 Journal of Medicinal Chemistry, 2006, Vol. 49, No. 7
Fillion et al.
mg, 1.0 mol equiv) was added. The resulting suspension was purged
with argon and was stirred at room temperature for 2 h until the
reaction had ended as judged by TLC (ethyl acetate (3)/petroleum
ether (7)). The reaction mixture was filtered, and the white
dicyclohexylurea precipitate was washed with methylene chloride
(2 × 2 mL). The filtrate was combined with the reaction mixture,
which was diluted with ethyl acetate (6 mL). The organic layer
was washed with a saturated CaCO3 solution (12 mL) and brine
(2 × 12 mL). The ethyl acetate/methylene chloride solution was
dried over anhydrous magnesium sulfate, vacuum filtered, and
evaporated under reduced pressure. The crude product was purified
by flash chromatography on silica gel using ethyl acetate/methylene
chloride as an eluant, leaving pure compound 8 as a white crystalline
solid. Yield: 67% (257 mg). Mp: 122-123 °C. 1H NMR (CDCl3,
300 MHz, δ (ppm)): 7.77 (d, J ) 7.4 Hz, 2H, H4,5-Fmoc), 7.61
resulting suspension was stirred at room temperature for 30 min
until the reaction had ended as judged by TLC (ethyl acetate (2)/
petroleum ether (8)). Compound 5 (314 mg, 1.0 mol equiv), the
catalyst tris(dibenzylideneacetone)dipalladium(0) (27 mg, 0.03 mol
equiv), and the ligand tri-o-tolylphosphine (47 mg, 0.15 mol equiv)
were quickly added to the Zn-9 suspension. The mixture was
purged with argon and stirred at room temperature for 1 h until the
reaction had ended as judged by TLC (ethyl acetate (2)/n-hexanes
(8)). The reaction mixture was filtered through a Celite pad from
which the Zn* was washed with ethyl acetate (3 × 3 mL). The
filtrate was combined with the reaction mixture, and the organic
layer was washed with a saturated sodium thiosulfate solution
(2 × 9 mL) and brine (2 × 9 mL). The ethyl acetate solution was
dried over anhydrous magnesium sulfate, vacuum filtered, and
evaporated under reduced pressure. The crude product was purified
by flash chromatography on silica gel using ethyl acetate/petroleum
ether as an eluant, leaving pure compound 10 as a dark red oil.
Yield: 55% (304 mg). Mp: 88-89 °C. 1H NMR (CDCl3, 350 MHz,
(d, J ) 7.4 Hz, 2H, H1,8-Fmoc), 7.41 (t, J ) 7.4 Hz, 2H, H3,6
-
Fmoc), 7.32 (t, J ) 7.4 Hz, 2H, H2,7-Fmoc), 5.68 (d, J ) 6.6 Hz,
1H, NH), 4.42 (d, J ) 7.0 Hz, 2H, O-CH2-Fmoc), 4.33 (m, 1H,
R-CH), 4.23 (t, J ) 6.9 Hz, 1H, CH-Fmoc), 3.94 (m, 2H, â-CH2),
2.51 (s, O-H), 1.49 (s, 9H, t-Bu).
δ (ppm)): 7.77 (d, J ) 7.5 Hz, 2H, H4,5-Fmoc), 7.55 (m, 4H, H1,8
-
Fmoc + m-H), 7.41 (t, J ) 7.3 Hz, 2H, H3,6-Fmoc), 7.31 (t, J )
7.3 Hz, 2H, H2,7-Fmoc), 7.20 (d, J ) 7.4 Hz, 2H, o-H), 5.29 (d, J
) 7.8 Hz, 1H, NH), 4.55 (∼q, J ) 6.4 Hz, 1H, R-CH), 4.47 (td, J
) 8.8, 2.0 Hz, 1H, OCHH-Fmoc), 4.34 (t, J ) 8.7 Hz, 1H, OCHH-
Fmoc), 4.20 (t, 1H, J ) 6.8 Hz, CH-Fmoc), 3.12 (d, J ) 5.6 Hz,
2H, â-CH2), 2.78 (d, J ) 8.0 Hz, 1H, NH-NH), 2.16 (d, J ) 9.0
Hz, 1H, NH-NH), 1.40 (s, 9H, t-Bu).
N-[(9-Fluorenyl)methoxycarbonyl)]-L-(â-iodo)alanine tert-
Butyl Ester (9). First Protocol.43 Compound 8 (383 mg, 1.0 mol
equiv), methyltriphenoxyphosphonium iodide (497 mg, 1.1 mol
equiv), and anhydrous N,N-dimethylformamide (2.0 mL, 0.5 M
final) were placed in an argon-purged round-bottom flask fitted
with a magnetic stirrer. The resulting solution was stirred at room
temperature for 1 h until the reaction had ended as judged by TLC
(ethyl acetate (3.0)/petroleum ether (7.0)). The reaction mixture was
diluted with ethyl acetate (4 mL), and the organic layer was washed
with distilled water (6 mL), a saturated sodium thiosulfate solution
(6 mL), and a saturated CaCO3 solution (6 mL). The ethyl acetate
solution was dried over anhydrous magnesium sulfate, vacuum
filtered, and evaporated under reduced pressure. The crude product
was purified by flash chromatography on silica gel using ethyl
acetate/methylene chloride as an eluant, leaving pure compound 9
as a slightly yellow crystalline solid. Yield: 88% (434 mg). Mp:
N-[(9-Fluorenyl)methoxycarbonyl]-p-[3-(trifluoromethyl)-3H-
diazirin-3-yl]-L-phenylalanine tert-Butyl Ester (11).38,39 Com-
pound 10 (554 mg, 1.0 mol equiv), freshly prepared silver oxide
(see below; 1.16 g, 5.0 mol equiv), and diethyl ether (4.0 mL, 0.25
M final concentration) were placed in a round-bottom flask fitted
with a magnetic stirrer and a condenser. The suspension was stirred
at room temperature for 8 h in the dark until the reaction had ended
as judged by TLC (ethyl acetate (3)/petroleum ether (7)). The
reaction mixture was diluted with diethyl ether (4 mL), dried over
anhydrous magnesium sulfate, and filtered through a Celite pad to
remove the silver, silver oxide, and magnesium sulfate, which were
washed with diethyl ether (3 × 8 mL). The filtrate was combined
with the reaction mixture, and the diethyl ether solution was
evaporated under reduced pressure, leaving crude 11 as a red oil,
which was used for the last step without further purification. The
compound may be further purified by flash chromatography on
silica gel using ethyl acetate/petroleum ether as an eluant to obtain
pure product compound 11 as a white crystalline solid. Yield: 87%.
1
81-83 °C. H NMR (CDCl3, 300 MHz, δ (ppm)): 7.77 (d, J )
7.4 Hz, 2H, H4,5-Fmoc), 7.62 (d, J ) 7.4 Hz, 2H, H1,8-Fmoc), 7.41
(t, J ) 7.1 Hz, 2H, H3,6-Fmoc), 7.33 (tt, J ) 7.4, 1.6 Hz, 2H, H2,7
-
Fmoc), 5.69 (d, J ) 7.1 Hz, 1H, NH), 4.46-4.32 (m, 3H, R-CH +
OCH2-Fmoc), 4.25 (t, 1H, J ) 7.1 Hz, CH-Fmoc), 3.61 (d, J )
3.4 Hz, 2H, â-CH2), 1.53 (s, 9H, t-Bu).
Second Protocol.44 Compound 8 (383 mg, 1.0 mol equiv) and
anhydrous methylene chloride (2.0 mL, 0.5 M final) were placed
in an argon-purged round-bottom flask fitted with a magnetic stirrer.
In the following order, chlorodiphenylphosphine (269 µL, 1.5 mol
equiv), imidazole (102 mg, 1.5 mol equiv), and iodine (380 mg,
1.5 mol equiv) were then added. The suspension was purged with
argon and was stirred at room temperature for 1 h until the reaction
had ended as judged by TLC (ethyl acetate(4.5)/n-hexanes (5.0)/
acetic acid (0.5)). The reaction mixture was diluted with methylene
chloride (4 mL), and the organic layer was washed with distilled
water (6 mL), a saturated sodium thiosulfate solution (6 mL), and
a saturated CaCO3 solution (6 mL). The methylene chloride solution
was dried over anhydrous magnesium sulfate, vacuum filtered, and
evaporated under reduced pressure. The crude product was purified
by flash chromatography on silica gel using ethyl acetate/methylene
chloride as an eluant, leaving pure compound 9 as a slightly yellow
crystalline solid. Yield: 53% (261 mg).
1
Mp: 85-86 °C. H NMR (CDCl3, 350 MHz, δ (ppm)): 7.78 (d,
J ) 7.5 Hz, 2H, H4,5-Fmoc), 7.58 (dd, 2H, J ) 1.7, 0.8 Hz, H1,8
-
Fmoc), 7.42 (t, J ) 7.4 Hz, 2H, H3,6-Fmoc), 7.32 (td, J ) 7.4, 1.1
Hz, 2H, H2,7-Fmoc), 7.12 (dd, J ) 19.8, 8.3 Hz, 4H, m-H + o-H),
5.41 (d, J ) 7.9 Hz, 1H, NH), 4.50 (m, 2H, R-CH + OCHH-Fmoc),
4.35 (∼t, J ) 8.7 Hz, 1H, OCHH-Fmoc), 4.20 (t, J ) 6.8 Hz, 1H,
CH-Fmoc), 3.10 (d, J ) 5.9 Hz, 2H, â-CH2), 1.40 (s, 9H, t-Bu).
Silver Oxide Solution. A 1 M solution of sodium hydroxide
(13 mL, 1.1 mol equiv) was added dropwise to a 1 M boiling
solution of silver nitrate (2.0 g, 1.0 mol equiv) with stirring. The
precipitated silver oxide was filtered, washed with distilled water
(15.0 mL), acetone (15.0 mL), and diethyl ether (15.0 mL), and
used immediately.
N-[(9-Fluorenyl)methoxycarbonyl]-p-[3-(trifluoromethyl)-3H-
diazirin-3-yl]-L-phenylalanine (Fmoc-12).45 Compound 11 (552
mg, 1.0 mol equiv), methylene chloride (10.0 mL, 0.1 M final),
triethylsilane (242 µL, 1.5 mol equiv), and R,R,R-trifluoroacetic
acid (3.9 mL, 50.0 mol equiv, ∼40% (v/v)) were placed in a round-
bottom flask fitted with a magnetic stirrer and a condenser. The
solution was stirred at room temperature for 3 h until the reaction
had ended as judged by TLC (ethyl acetate (1.0)/methylene chloride
(8.9)/acetic acid (0.1)). The reaction mixture was washed with water
(2 × 10 mL) and brine (2 × 10 mL). The methylene chloride
solution was dried over anhydrous magnesium sulfate, vacuum
filtered, and evaporated under reduced pressure. The crude product
was purified by flash chromatography on silica gel using ethyl
acetate (1.0)/methylene chloride (8.9)/acetic acid (0.1) as an eluant,
N-[(9-Fluorenyl)methoxycarbonyl)]-p-[3-(trifluoromethyl)-
diaziridine]-L-phenylalanine tert-Butyl Ester (10).45 Zinc dust
(325 mesh; 196 mg, 3.0 mol equiv), chlorotrimethylsilane (64 µL,
0.5 mol equiv), and anhydrous N,N-dimethylformamide (400 µL,
resulting in a 7.5 M solution) were placed in an argon-purged,
flame-dried, round-bottom flask fitted with a magnetic stirrer. The
suspension was vigorously stirred at room temperature for 30 min.
The stirring was stopped to let the Zn* decant for 1 h. The
chlorotrimethylsilane and N,N-dimethylformamide were then re-
moved using a syringe. A solution of compound 9 (493 mg, 1.0
mol equiv) in anhydrous N,N-dimethylformamide (0.5 mL, 2.0 M
final) was added dropwise to the activated anhydrous Zn*. The