B. van der Wildt, Z. Miao, S.T. Reyes et al.
Nuclear Medicine and Biology 100–101 (2021) 44–51
To a solution of 1 (0.56 g, 2.0 mmol) and TEA (0.56 mL, 4.0 mmol) in
DCM (5 mL) at 0 °C was added boron tribromide (1.0 M in DCM, 4.0
mL, 4.0 mmol) and the resulting solution was stirred for 3 h while
allowing gradual warming to room temperature. After concentration
in vacuo the residue was purified by flash column chromatography
(EtOAc/hexanes 2:1) to afford the product as a white solid (0.48 g,
90%). 1H NMR (400 MHz, CD3OD): δ = 7.22 (d, 1H, J = 8.7 Hz), 6.99
(d, 1H, J = 2.1 Hz), 6.73 (dd, 1H, J = 2.2, 8.6 Hz), 3.52 (m, 1H), 3.42
(m, 1H), 2.17 (m, 1H), 2.01 (m, 1H), 1.73 (m, 2H), 1.41–1.21 (m, 4H).
13C NMR (101 MHz, CD3OD): δ = 167.59, 153.70, 146.27, 132.03,
119.09, 114.91, 107.85, 74.50, 61.49, 35.38, 32.59, 25.60, 25.27. ESI-
HRMS: m/z calculated for C13H16N2O2S: 264.0932; found: 265.1006 [M
132.83, 120.08, 119.70, 115.19, 114.69, 110.77, 83.08 (d, J = 167.7 Hz),
74.35, 61.66, 41.06 (d, J = 21.3 Hz), 35.44, 32.53, 25.62, 25.29.
4-((2-(((1S,2R)-2-hydroxycyclohexyl)amino)benzo[d]thiazol-6-yl)
oxy)-N-methylpicolinamide, BLZ945:
To
a solution of 3 (25 mg, 63 μmol) in THF was added
methylamine·HCl (21 mg, 0.30 mmol) and K2CO3 (43 mg, 0.30
mmol). The mixture was reacted for 16 h at 50 °C. After filtration and
concentration in vacuo, the product was purified by flash column chro-
matography (EA - > 2% MeOH in EA) to obtain the product as an off-
white solid (20 mg, 80%). 1H NMR (400 MHz, CDCl3): δ = 8.35 (d, 1H,
J = 5.6 Hz), 8.02 (m, 1H), 7.68 (d, 1H, J = 2.5 Hz), 7.49 (d, 1H, J = 8.7
Hz), 7.27 (s, 1H), 6.99 (dd, 1H, J = 2.5, 8.7 Hz), 6.92 (dd, 1H, J = 2.6,
5.6 Hz), 6.18 (bs, 1H), 3.72 (bs, 1H), 3.50 (m, 2H), 3.00 (d, 3H, J = 5.2
Hz), 2.11 (m, 2H), 1.74 (m, 2H), 1.44–1.24 (m, 4H). 13C NMR (101
MHz, CDCl3): δ = 168.43, 166.94, 164.75, 152.26, 149.82, 149.77,
148.27, 131.81, 119.65, 119.33, 114.02, 113.52, 110.15, 75.06, 61.88,
34.28, 31.93, 26.29, 24.79, 24.17. ESI-HRMS: m/z calculated for
+ H]+
.
Compound 3 (4-((2-(((1S,2R)-2-hydroxycyclohexyl)amino)benzo
[d]thiazol-6-yl)oxy)picolinamide):
A mixture of 2 (66 mg, 0.25 mmol), methyl 4-fluoropicolinate (39
mg, 0.25 mmol) and K2CO3 (69 mg, 0.50 mmol) in DMF (4 mL) was
heated at 100 °C for 16 h. The mixture was diluted with EtOAc, filtered
and concentrated in vacuo. After flash column chromatography (EA -
> 2% MeOH in EtOAc) the product was obtained as a yellow solid (51
mg, 51%). 1H NMR (400 MHz, CDCl3): δ = 8.54 (d, 1H, J = 5.6 Hz),
7.62 (d, 1H, J = 2.5 Hz), 7.52 (d, 1H, J = 8.6 Hz), 7.28 (d, 1H, J = 2.4
Hz), 7.00 (dd, 1H, J = 2.5, 8.7 Hz), 6.97 (dd, 1H, J = 2.5, 5.6 Hz), 5.9
(m, 2H), 3.96 (s, 3H), 3.51 (m, 2H), 2.18 (m, 2H), 1.74 (m, 2H), 1.33
(m, 4H). 13C NMR (101 MHz, CDCl3): δ = 168.37, 166.55, 165.53,
151.41, 149.97, 148.21, 131.94, 119.87, 119.37, 114.73, 113.51, 113.39,
113.38, 75.24, 61.88, 53.13, 34.35, 32.02, 24.81, 24.15. ESI-HRMS: m/z
C
20H22N4O3S: 398.1413; found: 421.1308 [M + Na]+
.
2.3. In vitro IC50 determination
Affinities for designed compounds were determined using a com-
mercially available Z'-LYTE™ assay according to the manufacturer's in-
structions. Briefly, to a 384 well plate were added the respective
kinase (either CSF-1R, PDGFR-β or c-KIT in a final concentration of 0.5,
1.0 and 1.0 ng/μL, respectively) in supplied kinase buffer, ATP (in a
final concentration of 50 μM for CSF-1R and PDGFR-β, 100 μM for c-
KIT), the respective inhibitor (2-fold dilution series in a concentration
range from 1 μM to 0.5 nM), and the assay FRET-peptide. The resulting
solutions (total volume of 10 μL per well) were incubated at room
temperature for 1 h, followed by the addition of protease solution (5
μL per well). After careful mixing, the solutions were incubated for 1 h
followed by the addition of stop buffer (5 μL per well). Readout of the
plate was performed using excitation wavelength of 400 nm and
emission wavelengths of 445 nm (coumarin) and 520 nm (fluorescein)
with a 12 nm bandwidth. Negative control and positive control reac-
tions were performed by omission of ATP and inhibitor, respectively.
The obtained values are the result of three independent experiments
and are expressed as average IC50 value standard deviation.
calculated for C20H21N3O4S: 399.1253; found: 422.1145 [M + Na]+
.
Compound 4 4-((2-(((1S,2R)-2-hydroxycyclohexyl)amino)benzo
[d]thiazol-6-yl)oxy)picolinamide.
A mixture of 2 (66 mg, 0.25 mmol), 4-fluoropicolinamide (35 mg,
0.25 mmol) and K2CO3 (69 mg, 0.50 mmol) in DMF (4 mL) was heated
at 100 °C for 16 h. The mixture was diluted with EtOAc, filtered and con-
centrated in vacuo. After flash column chromatography (EA - > 2%
MeOH in EA) the product was obtained as a yellow solid (80 mg, 80%).
1H NMR (400 MHz, CDCl3): δ = 8.38 (d, 1H, J = 5.6 Hz), 7.86 (d, 1H, J
= 4.2 Hz), 7.67 (d, 1H, J = 2.6 Hz), 7.48 (d, 1H, J = 8.7 Hz), 7.27 (m,
1H), 6.97 (m, 2H), 6.24 (bs, 1H), 6.07 (d, 1H, J = 4.1 Hz), 4.32 (bs,
2H), 3.49 (m, 2H), 2.17 (m, 2H), 1.73 (m, 2H), 1.43–1.23 (m, 4H). 13C
NMR (101 MHz, CDCl3): δ = 168.42, 166.92, 166.62, 151.81, 150.02,
149.98, 148.17, 131.86, 119.67, 119.32, 114.43, 113.52, 110.41, 74.93,
61.90, 34.28, 31.92, 24.79, 24.19. ESI-HRMS: m/z calculated for
2.4. Radiosynthesis
C
19H20N4O3S: 384.1256; found: 385.1331 [M + H]+
Compound N-(2-fluoroethyl)-4-((2-(((1S,2R)-2-hydroxycy-
.
After proton bombardment, [11C]CO2 was delivered to a TRACERlab
FXC-pro module and trapped on a mixture of molecular sieves, pre-
charged with hydrogen gas, and nickel. After completing delivery, the
molecular sieve trap was heated to 350 °C and the formed [11C]CH4
was released to a silica trap, cooled to −80 °C using liquid nitrogen.
This trap was heated to release [11C]CH4 into a closed circuit, where it
was mixed with iodine vapor and converted to [11C]CH3I at 720 °C.
The [11C]CH3I that was formed was accumulated on a cooled Porapak
trap. When the radioactivity levels on this Porapak trap reached a pla-
teau, it was heated to 220 °C to release [11C]CH3I, which was transferred
to a reaction vial using a gentle stream of helium (20 mL/min). The reac-
tion vial was previously charged with precursor 4 (1.0 mg, 2.6 μmol) and
TBAOH (10 μL, 1.0 M in MeOH) in DMSO (400 μL) and was loaded with
5
clohexyl)amino)benzo[d]thiazol-6-yl)oxy)picolinamide.
A solution of compound 3 (40 mg, 0.10 mmol) in MeOH/THF/KOH (4
M in H2O) (1 mL, 4:9:2, v/v/v) was stirred at room temperature for 1 h.
The solution was concentrated in vacuo, diluted with water (10 mL) and
then acidified to pH 3 with 1 M HCl. The mixture was extracted with
DCM (3 × 10 mL). The combined organic fractions were concentrated
to dryness and the residue was resuspended in DMF (2 mL). Then,
DiPEA (39 mg, 0.30 mmol), 2-fluoroethylamine·HCl (10 mg, 0.10
mmol) and HATU (45 mg, 0.10 mmol) were added and the solution
was left for 16 h at room temperature. After concentration in vacuo,
the residue was purified by flash column chromatography (2% MeOH
in DCM) to afford the product as a white solid (25 mg, 58%). Intermedi-
ate: 1H NMR (400 MHz, CD3OD): δ = 8.62 (d, 1H, J = 6.1 Hz), 7.75 (m,
2H), 7.64 (d, 1H, J = 8.7 Hz), 7.39 (m, 2H), 3.55 (m, 2H), 2.14 (m, 2H),
1.82 (m, 2H), 1.43 (m, 4H); 13C NMR (101 MHz, CD3OD): δ = 171.25,
170.23, 163.84, 150.59, 149.69, 147.97, 140.89, 127.96, 121.88, 117.38,
116.50, 116.42, 114.62, 74.55, 63.97, 35.40, 31.83, 25.51, 25.10. Title
compound 5: 1H NMR (400 MHz, CD3OD): 8.46 (d, 1H, J = 5.6 Hz),
7.54 (s, 1H), 7.47 (d, 1H, J = 8.6 Hz), 7.41 (s, 1H), 7.04 (m, 2H), 4.61
(t, 1H, J = 5.1 Hz), 4.49 (t, 1H, J = 5.1 Hz), 3.66 (m, 3H), 3.46 (m, 1H),
2.20 (m, 1H), 2.06 (m, 1H), 1.78 (m, 2H), 1.37 (m, 4H); 13C NMR (101
MHz, CD3OD): 169.77, 168.46, 166.52, 153.01, 151.54, 151.45, 149.31,
[
11C]CH3I until radioactivity reached a maximum. The reactor was
sealed and the reaction solution was heated at 100 °C for 4 min and
subsequently cooled to 20 °C. Next, the reaction solution was diluted
with H20 (1.0 mL) and purified using HPLC using method A. The
collected HPLC product fraction was diluted with H2O (40 mL) and
passed over a preconditioned solid phase extraction cartridge (C18
Sep-Pak Light, Waters). After washing the cartridge with H2O (10 mL),
the product was obtained by sequential elution with ethanol (1.0 mL)
and saline (9.0 mL). A sample was analyzed by analytical HPLC to deter-
mine the (radio)chemical purity and molar activity (Method B).
46