Page 9 of 13
Journal of the American Chemical Society
room temperature without stirring until a white solid started to
Figure 9. Graph of activation, distortion, and interaction ener-
1
gies for TS-a11, TS-b11, and TS-g11. (black: activation ener-
form. When TLC indicated full conversion of the azide, the
mixture was cooled to -20 oC, filtered, and the solid was
washed with a small amount of hexanes to afford the product
as a white solid (270 mg, 87%).
2
gies, green: distortion energies of dipolarophile, blue: distor-
tion energies of azides, red: interaction energies). Calculated
3
4
5
M06-2X/6-311+G(d,p)/IEFPCMCHCl //M06-2X/6-
3
using
31G(d)/IEFPCMCHCl
.
3
6
7
8
9
Cycloaddition reaction between azide and DIBAC. In a
typical reaction, a solution of DIBAC in CDCl3 (9.0 mM) was
added into a solution of azide (18 mM). The reactions were
followed by NMR. The products were not isolated, and only
characterized by NMR as presented in the kinetic studies.
The interaction energies are nearly constant, and the distortion
energies control the small difference in reactivities.
Conclusion
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We have experimentally and computationally explored the
1,3-dipolar cycloaddition of PFAAs to enamines and strained
dipolarophiles (norbornene and DIBAC). Perfluorination of
phenyl group of these aryl azides accelerates cycloadditions to
all of the substrates studied here. This is due to improved
orbital interactions with the relatively low-lying LUMO of
PFAAs. Despite the predistortion of norbornene, PFAAs pre-
fer to react with enamines because of the much more favorable
interaction energies. These cycloadditions give triazolines as
intermediates that rearrange at room temperature to give ami-
dines, while cycloadditions involving enamines and phenyl
azide yield isolable triazolines. The mechanism of triazoline
decomposition is currently being investigated.
Kinetic studies. Kinetic experiments were conducted using
NMR following similar protocols reported in the litera-
ture.12,15,19 In a typical experiment, a solution of azide in deu-
terated solvent was mixed with an equal volume of the dipo-
1
larophile in an NMR tube at a mole ratio of 2:1. The H- or
19F-NMR spectra of the sample were recorded on a Bruker
AVANCE (400 MHz or 500 MHz) spectrometer every 1.5-5
minutes. The acquisition time for a typical experiment was 30
1
1
seconds for H-NMR and 18 seconds for 19F-NMR. In the H-
NMR studies, the peaks of the dipolarophile were monitored,
which decreased as the reaction proceeded. In the 19F-NMR
studies, the F signals in PFPAs and the cycloaddition products
were followed. Each reaction was allowed to proceed to 10% -
90% conversion. Every experiment was repeated at least three
times.
Experimental Methods
To calculate the rate constant of the cycloaddition reaction, the
conversion-time curve was constructed. The curves were then
fit to the standard second-order kinetic model using the statis-
tic software GraphPad prism (see SI for detailed calculations).
The characteristic peaks of the intermediates and products can
be found in corresponding datasheets in the supporting infor-
mation.
Materials. Azides, ketonic enamines, and aldehydic enamines
,
were synthesized using reported procedures.20 21 All com-
o
pounds were stored at –20 C and compound purity was as-
1
sessed by H-NMR before performing kinetic studies. Nor-
bornene (bicyclo[2.2.1]hept-2-ene, 99%) and DIBAC (diben-
zocyclooctyneamine, >94.5%) were purchased from Sigma-
Aldrich, and were used as received. In kinetic studies, CDCl3
was filtered through K2CO3 and treated over molecular sieves.
The amount of water in the purified CDCl3 was 0.3 ppm meas-
ured by 756 KF Coulometer, which was <1 mole% enamines
used in all kinetic studies.
Computational Methods
All computations were carried out with Gaussian09.22 Reac-
tants, transition states, and products were optimized with the
density functional M06-2X23 using the 6-31G(d) basis set with
an ultrafine grid, consisting of 590 radial shell and 99 grid
points per shell.24 M06-2X has been found to give reliable
energetics for cycloadditions involving main group elements.25
Normal vibrational mode analysis confirmed all stationary
points to be minima (no imaginary frequencies) or transition
states (one imaginary frequency). Zero point energy and ther-
mal corrections were computed from unscaled frequencies for
the standard state of 1 M and 298.15 K. Truhlar’s quasi-
harmonic correction was applied for entropy calculations by
setting all frequencies less than 100 cm-1 to 100 cm–1.26,27 Input
structures for these computations were generated using
Gaussview.
Cycloaddition reaction between azide and enamine
(Schemes 2 and 3). The following describes the reaction
between PFPA a and enamine 5. Other reactions were carried
out using the same protocols. To a solution of 5 (1.0 mmol) in
THF (1.0 mL), a solution of a (1.1 mmol) in THF (1.0 mL)
was added dropwise while stirring at room temperature. Reac-
tion progress was monitored by NMR spectroscopy. Upon a
reaction’s completion (8-12 hours), the solvent was removed
under reduced pressure and the residual mixture was purified
by flash column chromatography (hexanes/EtOAc= 9:1, Rf=
0.27) yielding (a-5)’ as a white powder (390 mg, 95%). Alter-
natively, the reactions could be carried out in methanol (1.5-3
mL) using a slight excess of enamines (1.1 eq). In this case,
the amidine product precipitated out from the solution within
12 hours and the product was separated by filtration (isolated
yields > 70% for all amidines).
ACKNOWLEDGMENT
We thank the National Science Foundation (NSF CHE-
1059084 to KNH and CHE-1112436 to MY), and KTH for
financial support of this research. SL thanks Dr. Colin Lam,
Rob Giacometti, and Ashay Patel for helpful discussions. SX
thanks the China Scholarship Council for a special scholarship
award. Calculations were performed on the Hoffman2 cluster
at UCLA and the Extreme Science and Engineering Discovery
Cycloaddition between azide and norbornene (Scheme 4).
The following describes the reaction of azide c with nor-
bornene 9. Reactions of other azides followed the same proto-
col. To a solution of norbornene 9 (1.25 mmol) in hexanes (2-
4 mL), azide c (1.00 mmol) was added. The solution was set at
9
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