Phosphodiester Hydrolysis with Macrocyclic Lanthanide(III) Complexes
those reported by Martell but similar to, or greater than, was calculated from the extinction coefficient (18,700 –1 cm ,
–1
4
00 nm). The initial rate of each reaction was obtained directly
those reported by Yatsimirsky (second-order rate constants
of around 0.1–1.0 s ).
–
1
–1 [18,30]
from the slope of the plot of 4-nitrophenolate ion concentration vs.
time (i.e. up to 500 s for pH 7.90 data and 250 s for pH 9.35 and
9
.90 data to ensure less than 5% of the reaction). All plots were
2
linear with r Ն0.98. All experiments were run at least in duplicate
and the reported data represent the average values. Agreement be-
tween the calculated initial rates for replicate experiments was
within 6% for [BNPP]-dependence studies. The data variations
Conclusions
Trivalent lanthanide ions are good Lewis acids for the
promotion of BNPP hydrolysis, although they need ligands
to form complexes in order to prevent uncontrolled lantha-
nide hydroxide or oxide formation (ligand-controlled hy-
drolysis). The properties of the resulting complexes, includ-
ing charge, steric constraints, the number of inner-sphere
coordinated water molecules, etc., are modified by the li-
gands. We have shown herein that dimeric species such as
the mono-hydroxo-bridged species {Ln L (µ-OH)(OH)-
+
were much greater for the [LnDO2A ]-dependence studies at
pH 7.90, 9.35, and 9.90 (Յ30%; see Results and Discussion).
For the lanthanide complex concentration-dependence studies, the
final BNPP concentration was kept at 0.10 m and the lanthanide
complex concentrations were varied in the range 1.0–20.0 m to
fulfill pseudo-first-order reaction conditions. The ionic strength
was adjusted to 0.10 with (CH ) NCl. An HP 8453 UV/Vis spec-
3 4
trophotometer was used to measure the absorption increase with
2
2
(
(
OH ) } and the di-hydroxo-bridged species {Ln L (µ-OH) -
2 3 2 2 2
OH ) } are potentially more reactive for promoting BNPP BNPP hydrolysis.[ Initial rate constants were calculated from the
time at 400 nm due to the formation of 4-nitrophenolate ion after
1]
2
2
hydrolysis. These discoveries could be applicable to the de- initial rate data divided by [BNPP] , the initial concentration of
0
–
4
sign of better and more stable macrocyclic lanthanide com- BNPP (1.0ϫ10 ). Microsoft Excel was used for data treatment
and Sigma plot was use for curve fitting.
plex reagents for phosphodiester bond hydrolysis, and stud-
Laser-excited fluorescence[7] and ESI-MS[2] experiments were per-
formed at the Department of Applied Chemistry, National Chiao
Tung University, with instruments similar to those described in
published procedures.
ies along these lines are currently underway.
Experimental Section
Sample Preparation: Materials and standard solutions were ob-
Acknowledgments
tained and standardized according to previously reported pro-
[
1]
cedures. Analytical reagent-grade chemicals and buffers, unless
otherwise stated, were purchased from Sigma (St. Louis, MO,
USA), Aldrich (Milwaukee, Wl, USA), or Merck (Darmstadt, Ger-
many) and were used as received without further purification. Dis-
odium ethylenediaminetetraacetic acid (EDTA) was purchased
The authors wish to thank the National Science Council of the
Republic of China (Taiwan) for financial support (grant number
NSC-95-2113-M-009-025) of this work. A grant from the Atomic
Energy Council (grant number 96-NU-7-009-003) is also acknowl-
edged. We thank Professor Yuan-Pern Lee and Mr. Kuo-Hua Hu-
ang for help with the laser-excited fluorescence spectral measure-
ments.
2
from Fisher. The ligand DO2A·2HCl·H O was prepared and puri-
fied according to a minor modification of a published method.[
6]
C
12
H
24
N
4
O
4
2
·2HCl·H O: calcd. C 38.00, H 7.44, N 14.77; found C
37.98, H 7.24, N 14.71. Carbonate-free deionized water was used
for all solution preparations. Lanthanide(III) nitrate solutions were
standardized by EDTA complexometric titrations using xylenol
orange as the indicator. The DO2A ligand solution was standard-
ized by pH titrations and complexometric titrations with standard-
[1] C. A. Chang, B. H. Wu, B. Y. Kuan, Inorg. Chem. 2005, 44,
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[2] C. A. Chang, Y.-P. Chen, C.-H. Hsiao, Eur. J. Inorg. Chem.
2
009, in press.
[3] a) B. N. Trawick, A. T. Daniher, J. K. Bashkin, Chem. Rev.
998, 98, 939–960; b) M. Oivanen, S. Kuusela, H. Lönnberg,
ized calcium chloride solution.[
1]
1
Kinetic Measurements: All lanthanide complex solutions were
freshly prepared by mixing the metal salt and ligand in a 1.00:1.02
molar ratio. The pH of each solution was adjusted to 6.0–6.5 by
Chem. Rev. 1998, 98, 961–990; c) N. H. Williams, B. Takasaki,
M. Well, J. Chin, Acc. Chem. Res. 1999, 32, 485–493.
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3 4
adding the appropriate amount of (CH ) NOH solution. The
BNPP solution was then added to each solution and the final pH
adjusted by adding an appropriate amount of buffer stock solution
and used within 20 min after preparation. MPS [3-(N-morpholino)-
propanesulfonic acid], TAPS (3-{[tris(hydroxymethyl)methyl]-
amino}propanesulfonic acid), CHES [2-(cyclohexylamino)ethane-
sulfonic acid], and CAPS [3-(cyclohexylamino)-1-propanesulfonic
2
003, vol. 40, chapter 11; c) M. Komiyama, “Sequence-Selec-
tive Scission of DNA and RNA by Lanthanide Ions and Their
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ter 12; d) M. Komiyama, Cutting DNA and RNA, in Handbook
on the Physics and Chemistry of Rare Earths, Elsevier, Amster-
dam, 2004, vol. 34, chapter 222.
a
acid], with the respective pK values 7.2, 8.4, 9.3, and 10.4, were
used to prepare buffer solutions with the desired pH. The initial
rates of the lanthanide-complex-promoted BNPP hydrolysis reac-
tions were determined by monitoring spectrophotometrically the
absorbance (400 nm) change with time due to the production of 4-
nitrophenolate ion from BNPP. The absorbance at 400 nm due to
[
5] a) K. New, C. M. Andolina, J. R. Morrow, J. Am. Chem. Soc.
2
008, 130, 14861–14871; b) I. Sanchez-Lombardo, A. K. Yatsi-
mirsky, Inorg. Chem. 2008, 47, 2514–2525.
4-nitrophenol (i.e. less than 0.2% in all cases) was corrected for all
[
6] A. Roigk, R. Hettich, H.-J. Schneider, Inorg. Chem. 1998, 37,
solutions. Corrections for the spontaneous hydrolysis of the BNPP
substrate in the buffer solutions were not necessary as they were
7
51–756.
[7] C. A. Chang, F.-K. Shieh, Y.-L. Liu, Y.-H. Chen, H.-Y. Chen,
[
1]
negligible. The concentration of 4-nitrophenolate ion produced
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Eur. J. Inorg. Chem. 2009, 1339–1346
© 2009 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim
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