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Organic & Biomolecular Chemistry
Page 5 of 6
DOI: 10.1039/C6OB01629D
Organic & Biomolecular Chemistry
ARTICLE
containing a variable concentration of substrate amino donor (0.01 of homologs ω-transaminases. Therefore, as general rule, the
to 2 mM), 10 mM of pyruvate, 0.1 mM PLP and an appropriate mutation of large pocket tryptophan with a smaller residue yields to
an improvement in the reactivity of ortho-substituted aromatic
compounds. The change of the large pocket isoleucine provides
amount of enzyme. The reaction rate was detected at 245 nm over
2
0 minutes at 25°C. The molar extinction coefficient was calculated
for each product in order to calculate the reaction rate in mM/s
data not shown). The data were elaborated by fitting them with
instead an increase in activity of para-substituted molecules. On the
other hand, F84 between the two pockets was very sensible to
substitution and when it was changed for smaller alanine, it gave a
worst conversion of ortho and para aromatic amines. Consequently,
this position has a fundamental role in the oxidation step of amino
transaminase and it should be preserved in order to maintain the
optimal enzyme efficiency.
(
the Lineweaver–Burk double reciprocal plot which yielded the
Michaelis-Menten parameters (Km and Kcat).
Chirality evaluation
To evaluate the enantioselectivity of the enzymes, the chiral amine
products were assessed by chiral HPLC analysis, following
derivatization to the corresponding amides by adapting the method
Acknowledgements
®
reported by Andrade et al. with Codex ATA Screening Kit. Addition
The authors wish to thank Cariplo Foundation for funding the
project “INnovative Biocatalytic OXidations – INBOX” (Rif.2014-
of 100 µL 5 M NaOH to the sample was followed by extraction in
900 µL methyl-tert-butyl ether (MTBE) and then by addition of 5 µL
0
568) “Ricerca integrata biotecnologie industriali” (Dr. Contente)
triethylamine and 5 µL acetic anhydride. A normal-phase HPLC and Science Foundation Ireland through the Synthesis and Solid
method was performed on an Agilent Technologies 1200 equipped State Pharmaceutical Centre grant number 12/RC/2275
®
(Planchestainer and reagents).
with a Chiralpak IC (250mm x 4.6 mm, 5 µm particle size).
Detection at 254 nm after an isocratic run 95:05 Heptane:Ethanol at
2
5 °C with a flow rate of 1 mL/min. Employing this method, product
Notes and references
and starting materials were separated with the following retention
times (in minutes): acetophenone (7.1), derivatized (R)-1-
phenylethylamine (16.7) and (S)-1-phenylethylamine (19.1), 4-
nitroacetophenone (12.4), derivatized (R)-4-nitrophenylethylamine
1
C. K. Savile, J. M. Janey, E. C. Mundorff, J. C. Moore, S. Tam,
W. R. Jarvis, J. C. Colbeck, A. Krebber, F. J. Fleitz, J. Brands, P.
N. Devine, G. W. Huisman, G. J. Hughes, Science, 2010, 329
305.
,
(
22.4) and (S)-4-nitrophenylethylamine (24.2), 3-nitroacetophenone
13.6), derivatized (R)-3-nitrophenylethylamine (23.7) and (S)-3-
(
2
3
4
5
6
7
D. Koszelewski, I. Lavandera, D. Clay, D. Rozzell and W.
Kroutil, Adv. Synth. Catal., 2008, 350, 2761.
nitrophenylethylamine
(26.7),
2-nitroacetophenone
(14.2),
derivatized (R)-3-nitrophenylethylamine (24.8) and (S)-3-
nitrophenylethylamine (27.1) .
J. Rudat, B. R. Brucher and C. Syldatk, AMB Express, 2012,
1.
2,
1
Protein modelling and structural analysis
The protein model was build using the SWISS-MODEL Homology
D. Koszelewski, K. Tauber, K. Faber, W. Kroutil, Trends
Biotechnol., 2010, 28, 324.
1
5
Modeling tool, superimposing the HEWT protein sequence on the
resolved structure of the homologues amino transaminase from
14
K. E. Cassimjee, B. Manta and F. Himo Org. Biomol. Chem.,
015, 13, 8453.
Cromobacterium violaceum (PDB: 4a72). Substrate docking was
2
2
1
performed exploiting the open source tool Autodock Vina. The
results elaboration and the structural evaluation was achieved using
the molecular visualization system PyMOL (open source license).
Sequence analysis and alignment was performed with CunSurf,
G. D. Smith, R. Harrison and R. Eisenthal, Neurochem. Res.,
1996, 21, 1061.
2
2
J. F. Kirsch, G. Eichele, G. C. Ford, M. G. Vincent, J. N.
Jansonius, H. Gehring and P. Christen, J. Mol. Biol., 1984,
software for multiple blast provided by BioSoft.
1
74, 497.
Conclusions
8
9
J. S. Shin and B. G. Kim, J. Org. Chem., 2002, 67, 2848.
Transaminase from Halomonas elongata (HEWT) showed a wide
variety of catalytic abilities towards different aromatic substrates
D. Koszelewski, I. Lavandera, D. Clay, G. M. Guebitz, D.
Rozzell and W. Kroutil, Angew. Chemie - Int. Ed., 2008, 47
337.
,
(
ketones, aldehydes, amines). Acetophenone derivatives were poor
substrates for the wild-type enzyme, since only meta- and para-NO
acetophenones were reduced with molar conversions ranging from 10 E. S. Park, S. R. Park, S. W. Han, J. Y. Dong and J. S. Shin, Adv.
0 to 20%. Four mutants were designed following in silico
Synth. Catal., 2014, 356, 212.
substrate-enzyme binding mode studies. Mutant W56G proved able
9
2
1
to catalyse also the amination of ortho-NO
2
acetophenone, as a 11 L. Cerioli, M. Planchestainer, J. Cassidy, D. Tessaro and F.
Paradisi, J. Mol. Catal. B Enzym., 2015, 120, 141.
result of reduced interferences and facilitated substrate binding.
Variants W56G and F84A, which have an enlarged binding pocket,
showed better performances with ortho-substituted benzaldehyde
derivatives, whereas I258A was the best mutant for para-
derivatives. Since the investigated mutations involved highly
conserved amino acids, these findings might reflect the behaviour
1
2 M. L. Contente, I. Serra, L. Palazzolo, C. Parravicini, E.
Gianazza, I. Eberini, A. Pinto, B. Guidi, F. Molinari, D.
Romano, Org. Biomol. Chem, 2016, 14, 3404.
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