I. Schmidt et al. / Bioorganic & Medicinal Chemistry xxx (2017) xxx–xxx
5
inhibitor with Ki = 1.2 mM and Ki’ = 12 mM, indicating a higher affin-
ity for the free enzyme than for the enzyme-substrate complex.
Comparing the inhibitory potency of 5 mM 2f and 4b, both hav-
ing a heptane linker, in the presence of 100 and 40 mM of TS2
revealed a stronger inhibition for 2f (53 and 66%) and a slightly
greater difference. This might be due to the different mode of inhi-
bition, i.e. competitive versus mixed type.
Since TryR and human glutathione reductase (hGR) share almost
40% of the residues and thus have a similar structure and mecha-
nism of action,17 compound 2h was tested for its inhibitory activity
towards hGR as well. At 100 mM GSSG, 2 and 50 mM 2h only weakly
inhibited the host enzyme by 2% and 19%, respectively. Thus, the
compounds are likely to be selective for the protozoal TyrR.
substrate stock solution (400 mM in DMSO) were added and the
increase of the fluorescence was observed over 5 min. The enzyme
activity was calculated from the slopes of the curves obtained (DF
vs. time). Compounds having an inhibitory effect greater than 50%
at 20 mM were chosen for detailed assays. Therefore, 185 ml buffer,
5 ml enzyme solution, 5 ml inhibitor solution, and 5 ml substrate
solution were mixed and the fluorescence intensity was recorded
over 10 min. Inhibitor concentrations were in the range of 0–
100 mM in case of compounds 3b, 3d, and 3g; 0–50 mM in case of
compounds 2h; 0–40 mM in case of compounds 2g, 3a, and 3f;
and 0–20 mM in case of compounds 3c. IC50-values were obtained
by nonlinear regression analysis using OriginÒ Pro 2015 software.
4.2.2.2. Trypanothione reductase assay. Trypanothione disulfide
(TS2) was synthesized enzymatically.28 TryR activity was measured
in a total volume of 1 ml of 40 mM of HEPES buffer, 1 mM EDTA, pH
7.5, containing 100 mM NADPH and the enzyme. The reaction was
started by adding TS2; the absorbance decrease at 340 nm was fol-
lowed at 25 °C using a Jasco V-650 spectrophotometer. The con-
3. Conclusion
Substitution variations of both ends of the bistacrines and the
length of the linker led to compounds of inhibitory activities
against Trypanosoma brucei brucei covering three orders of magni-
tude which allow to establish pronounced structure-activity rela-
tionships (SARs). SARs point to a specific interaction with a
defined target. Whereas some compounds showed inhibition of
rhodesain in micromolar range of concentration, the inhibition of
TryR was partially found in submicromolar concentrations, which
is in line with the in vitro activity. Interestingly, some compounds
are competitive (series 2) and some are mixed-mode inhibitors.
This may suggest TryR being a more important target of these com-
pounds compared to rhodesain. Of note, preliminary investigations
showed that the bistacrine compounds show antileishmanial activ-
ity and inhibit the corresponding TryR of Leishmania infantum (data
not shown).
However, the compounds were found to have a high lipophilic-
ity4 which might affect the toxicity adversely.18 It might be specu-
lated that a decrease of logP – e.g. by introducing carbonyl groups
or polyoxyethylene moieties into the linker – may lead to reduced
promiscuity and thus, to reduced toxicity. Anyway, the bistacrine
moiety and especially compound 4b is a promising lead structure
for further development of an antitrypanosomal drug.
sumption of NADPH (e
= 6.2 mMÀ1 cmÀ1) was used to calculate
the volume activity of the enzyme. The amount of TryR in the assay
was chosen to obtain an absorbance decrease of À0.02 to
À0.08 minÀ1 (corresponding to 10 mU per 1 mL assay solution,
i.e. 2 nM).
Millimolar stock solutions of the inhibitors were prepared in
DMSO. Each assay contained a total volume of 50 ml of DMSO, either
of inhibitor solution or DMSO as control. The preliminary screening
was performed with inhibitor concentrations from 1 to 5 mM and a
fixed concentration of either 40 or 100 mM TS2. For the detailed
kinetic analyses, the TS2 concentration was varied from 20 to
200 mM. The inhibitor constants were calculated by means of Graph-
pad Prism 7 (GraphPad Software, Inc.La Jolla, CA, USA).
4.2.2.3. Glutathione reductase assay. The assay was performed
according to 29. In brief, the activity of hGR was measured in
47 mM potassium phosphate, 200 mM KCl, 1 mM EDTA, pH 6.9.
In analogy to the TR assay, the assays contained in a total volume
of 1 ml buffer 100 mM NADPH and 6–30 mU of hGR (i.e. 1–2 nM),
and the activity was measured at 25 °C. The reaction was started
by addition of glutathione disulfide (GSSG) and the decrease of
absorbance was followed at 340 nm.
4. Experimental
4.1. Chemistry
Acknowledgements
Tacrine (1a)19 and compounds 1d,4 1e,20 1f,4,21 1j,22 1m,4 1n,22
2a–i,4,23–25 3a–c,4 3f,4 and 3g4 were prepared as previously
described. The new compounds were synthesized accordingly.
Details and the synthetic pathway for compounds 4a–4e can be
found in the Supporting information.
This work was funded by the SFB 630 of the Deutsche
Forschungsgemeinschaft. Thanks are due to Anja Hasenkopf,
Würzburg, for the re-synthesis of the compounds 4, and Alejandro
Leroux and Sarah Göllner, Heidelberg, who contributed to the TR
kinetics.
4.2. Biological assays
A. Supplementary data
4.2.1. Trypanosoma and macrophage assay
AlamarBlueÒ assays for investigating the activity against T. bru-
cei brucei laboratory strain TC221 and J774.1 macrophages were
conducted as previously reported.12,26
Supplementary data associated with this article can be found, in
References
4.2.2. Enzyme assays
1. World Health Organisation: Trypanosomiasis, fact sheet N°259. http://www.
4.2.2.1. Rhodesain assay. The assay was performed as described
previously.27 In brief: The assays were performed twice in a Varian
Cary Eclipse spectrofluorometer in 96-well plates using a micro-
plate reader (excitation wavelength 380 nm, emission wavelength
460 nm) and a total volume of 200 ml. Cbz-Phe-Arg-AMC was used
as substrate. To 180 ml of sodium acetate buffer (50 mM, pH 5.5,
containing 5 mM DDT, 5 mM EDTA and 200 mM NaCl) 5 ml enzyme
solution, 10 ml inhibitor stock solution (400 mM in DMSO), and 5 ml