Y.-J. Wang et al. / Journal of Molecular Catalysis B: Enzymatic 122 (2015) 44–50
45
(DE3) (Novagen, USA) was used to overexpress the caakr. (R)-1a
was generously presented by Neo-Dankong Pharmaceutical Co., Ltd
(Taizhou, China). (R,R)-1b was purchased from Toronto Research
Chemicals Co. Ltd. (Toronto, Canada). Plasmids pMD18-T (TaKaRa,
Japan) and pET-28a (+) (Novagen, USA) were used as vectors for
the cloning and expression, respectively. Taq DNA polymerase and
Pfu DNA were purchased from Takara (Dalian, China). Restriction
enzymes and T4 DNA ligase were supplied by Thermo Fisher Scien-
tific Co., Ltd (Beijing, China). Primers synthesis and DNA sequencing
were conducted at Shanghai Sunny Biotechnology Co., Ltd. (Shang-
hai, China). The DNA gel extraction kit and plasmid extraction
kits were purchased from Axygen (Suzhou, China). Kanamycin and
ampicillin were purchased from Sigma-Aldrich (USA). NADH was
supplied by Sangon Biotech Co. (Shanghai, China). Unless otherwise
stated, all other chemicals and agents used were of analytical grade
and available commercially.
sis IFO 0708 (PDB ID: 4H8N and PDB ID: 3VXG) in complex with
NADPH using AutoDock vina (Accelrys Inc., CA, USA) [22].
2.5. Enzyme assays
The activity of CaAKR was assayed spectrophotometrically at
30 ◦C by continuous monitoring the absorbance decrease of NADH
at 340 nm, which was conducted in 96-well plates. The reaction
mixture with a total volume of 200 L contained 200 mmol/L potas-
sium phosphate buffer (pH 7.0), 0.5 mmol/L of NADH, 12.5 mmol/L
(R)-1a and an appropriate amount of the purified CaAKR. One unit
of CaAKR activity was defined as the amount of enzyme required to
oxidize 1 mol NADH per minute under the standard conditions.
2.6. Characterization of the recombinant CaAKR
2.6.1. Effect of pH
2.2. Construction of expression plasmid
The optimum pH for CaAKR activity was determined at 1 mg/mL
CaARK in three buffers within a pH range from 3.5 to 9.5 at
200 mmol/L, including acetate buffer (pH 3.5–5.5), potassium phos-
phate buffer (pH 6.0–8.0), Tris–HCl buffer (pH 8.5–9.5). The pH
stability was determined by incubating 1 mg/mL CaARK in buffers
with varying pHs between 4.0 and 8.0 at 4 ◦C for 120 h. Samples
were withdrawn for the residual activity determination, which
was carried out under standard assay conditions with the non-
incubated CaAKR as the control.
The caakr was amplified by PCR from the genomic DNA of C. albi-
cans CCTCC M 2014382 by using the primers designed as follows:
ca-F:
5ꢀ-CATATGATAGGATCCGGAGGAGGATGTATATGTATCC-3ꢀ
(the
Nde
I
site
is
underlined),
ca-R:
5ꢀ-
site
GCGGCCGCTCGCTGCAGATGTTTAACCGCGGC-3ꢀ (the Not
I
is underlined), based on caakr sequence with the GenBank
accession number of XP 711680.1.
The purified PCR product was ligated with the pMD18-T vector,
double-digested with Nde I and Not I, and then inserted into expres-
sion vector pET-28a (+). The resultant recombined plasmids pET28a
(+)-caakr was transformed into E. coli BL21 (DE3) competent cells,
and selected on Luria-Bertani (LB) agar plates supplementing with
50 g/mL kanamycin. The positive clones were confirmed by DNA
sequencing.
2.6.2. Effect of temperature
The optimum temperature for CaAKR activity was investigated
at temperatures between 20 ◦C and 50 ◦C. Thermal stability was
determined by incubating the purified CaAKR at a final concentra-
tion of 1 mg/mL, temperatures between 20 ◦C and 50 ◦C for 20 h.
Samples were withdrawn for the residual activity determination,
which was carried out under standard assay conditions with the
non-heated CaAKR as the control.
2.3. CaAKR expression and purification
The positive transformants were cultivated at 37 ◦C, 150 rpm in
LB medium containing 50 g/mL kanamycin until OD600 reached
0.8, and then subjected to induction by 9 g/L lactose at 28 ◦C,
150 rpm for 10 h. The resultant cells were harvested by centrifu-
gation at 4 ◦C, 9000 rpm for 10 min, and washed twice with 0.9%
NaCl (w/v) solution.
2.7. Kinetic analysis
The kinetic parameters were calculated from the initial-
velocity double-reciprocal plot [23], at 1 mg/mL CaARK, 30 ◦C,
in 200 mmol/L, pH7.0 potassium phosphate buffer. For la, v0
was detected at varying final concentrations of (R)-1a between
The cell pellet was resuspended in buffer A composed of
20 mmol/L, pH 8.0 sodium phosphate buffer, 500 mmol/L NaCl
and 20 mmol/L imidazole, and disrupted by sonication. The cell
debris was removed by centrifugation at 4 ◦C, 12,000 rpm for
20 min, and the supernatant was loaded onto a Ni-NTA column pre-
equilibrated with buffer A, and eluated with buffer B consisting of
20 mmol/L sodium phosphate buffer, pH 8.0, 500 mmol/L NaCl and
500 mmol/L imidazole. The flowrate of mobile phase was main-
tained at 1 mL/min. The active fractions were pooled and dialyzed
against 200 mmol/L, pH 7.0 potassium phosphate buffer at 4 ◦C for
12 h. The purity and molecular mass of the enzyme was analyzed by
sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-
PAGE) with 12% separating gel. The protein concentration was
determined by the method of Bradford using BSA as the standard
[21].
0.4 mmol/L. For NADH, the final concentration of NADH was
varied from 0.1 mmol/L to 0.4 mmol/L in the presence of
4.0 mmol/L (R)-1a. The maximal reaction rate (Vmax) and apparent
(R)−1a
Michaelis–Menten constants (Km
KmNADH) were calculated
,
from the initial-velocity double-reciprocal plot [23]. The value of
parameter kcat (the catalytic constant) was obtained by dividing
Vmax by CaAKR concentration [16].
2.8. Substrate specificity
To investigate its substrate spectrum, CaAKR-catalyzed reduc-
tion of aldehydes, ketones and ketone esters were investigated
under the standard assay conditions. The relative activity toward
(R)-1a was designated as 100%.
The bioreduction was performed in 1.5 mL Eppendorf tubes con-
taining 200 mmol/L potassium phosphate buffer (pH 7.0), 1 mmol/L
of each substrate, 0.5 mmol/L NADH, and 1 mg/mL purified CaAKR
in a total volume of 1.0 mL, shaking for 10 h at 30 ◦C. The reaction
mixture was extracted twice with an equivalent volume of 300 L
ethyl acetate. The extracts were combined, dried with anhydrous
sodium sulfate. The concentrations for each product were deter-
mined by GC or HPLC analysis.
2.4. Sequence analysis and molecular modeling
The multiple sequence alignment was performed with the soft-
els of CaAKR were built based on the crystal structure of the
conjugated polyketone reductase C2 (CPR-C2) from C. parapsilo-