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The Journal of Organic Chemistry
Note
of ∼7 and ∼11 nm hydrodynamic diameter, respectively.
This demonstrates that the butyl branch significantly increases
hydrophobicity while keeping the length of the apolar domain
short. Compound 1 was found to form rather homogeneous
complexes with the protein bacteriorhodopsin, which remained
stable for a month. Complex with compound 2 was
heterogeneous, but the protein remained stable for more than
three months.
EXPERIMENTAL SECTION
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Figure 2. Spectral time course of bR in compounds 1 (left) and 2
(right). Samples incubated at 4 °C in the dark, and UV−vis spectra
were recorded at the indicated time, in days. Inset: migration of bR in
10−30% sucrose gradients containing 6 mM of compounds 1 or 2.
Black arrows indicate the position of the main absorption peak and of
the shoulder, and gray arrows and line indicate the position of the
protein in the gradient.
Synthesis. Mercury cyanide Hg(CN)2 was dried overnight on
P2O5 under vacuum. All of the solvents were of reagent grade, distilled,
and dried according to standard procedures prior to use. The progress
of the reactions was monitored by thin-layer chromatography (TLC,
silica plates), and the compounds were detected either by exposure to
ultraviolet light (254 nm) or by spraying with a 5% sulfuric acid
solution in ethanol and with a 2% ninhydrin solution in ethanol
following heating at ∼150 °C. Ultrasonication was performed with a
sonicator equipped with a 13 mm diameter titanium probe. Flash
chromatography purification was carried out on silica gel (40−63 μm
granulometry). Water was deionized with a Milli-Q water purification
system (resistivity of 18.2 MΩ cm). The 1H, 13C, and 19F NMR
experiments were performed at 250, 62.86, and 235 MHz, respectively.
Chemical shifts are given in ppm relative to the solvent residual peak
gradient experiments. For bR solubilized by compound 1, two
species can be distinguished within the sharp-colored band: an
upper dark purple one and a lower more pinkish one (indicated
by two arrows), in agreement with the absorbance spectrum,
which presents a main visible absorption peak at 555 nm with
a shoulder at 570 nm (Figure 2, left panel, D0, red trace).
The position and the closeness of the two species within the
gradient suggest that they correspond to homogeneous
monomer and dimer.10 These species, and their relative
amount, appear stable over 1 month. After 3 months, however,
the spectrum shows diffusion, witness of aggregation of the
protein, with the 555 and 570 nm absorbing species remaining
nondenatured (Figure 2, left panel, D91, blue trace). In
compound 2, bR migrates as a broad, diffuse band. This may be
related to the fact that compound 2 forms larger micelles
(Figure 1) and/or reflects the presence of a mixture of different
oligomeric states of the protein. Indeed, the spectrum of the
collected band shows a major peak at 555 nm, with a slight
shoulder around 590 nm (Figure 2, right panel), suggesting that
more than one oligomeric state of the protein is present. These
species are very stable over time, as the spectrum does not
show any sign of neither denaturation nor aggregation after
three months, which is quite remarkable. When solubilized in
n-octyl-β-D-thioglucopyranoside (OTG), bR is monomeric and
is completely denatured in only 3 days (not shown). The
presence of higher molecular weight oligomers thus confirm
that these hybrid surfactants are milder than detergents and that
protein−protein interactions can be favored over surfactant−
protein ones. This is particularly interesting when working with
proteins composed of several subunits and/or that oligomerize.
It is interesting to note that when solubilized in compounds
1 or 2, the protein displays a maximum of absorption in the
555−590 nm range and does not appear blue (λmax = 615 nm),
as when handled in fluorinated surfactants.16,27 This suggests
that compounds 1 and 2 organize so that the hydrogenated part
of their hydrophobic moiety interacts with the hydrophobic
domain of the protein. This is coherent with the fact that, as
mentioned in the introduction, van der Waals interactions are
weaker between fluoro- and hydrogenated groups than among
hydrogenated ones.
1
as a heteronuclear reference for H and 13C. Abbreviations used for
signal patterns are s, singlet; b, broad; d, doublet; t, triplet; q, quartet;
qt, quintet; sext, sextet; m, multiplet; dd, doublet of doublet. HR-MS
spectra were recorded on a mass spectrometer equipped with a TOF
analyzer for ESI+ experiments.
N-(2,3-Dihydroxypropyl)but-3-enamide (3). To a solution of 3-
aminopropane-1,2-diol (1.98 mL, 0.026 mol) and 3-butenoic acid
(1.97 mL, 0.023 mol) in ethanol (120 mL) was added EEDQ (6.890 g,
0.028 mol) portionwise under stirring. The reaction mixture was
heated at 60 °C for 18 h. After the mixture was cooled to rt, acidic
resin IRC-50 was added, and the reaction mixture was filtered and
concentrated in vacuo. The resulting crude compound was purified by
flash chromatography (9:1 EtOAc/MeOH) to afford compound 3
1
(3.291 g, 90%) as a white powder. H NMR (CDCl3): δ 6.85 (1H, t,
J = 6.0 Hz); 6.00−5.79 (1H, m); 5.24−5.14 (2H, m); 4.37 (1H, m);
4.22 (1H, m); 3.74 (1H, m); 3.61−3.44 (2H, m); 3.43−3.22 (2H, m);
3.03−2.99 (2H, d, J = 7.1 Hz). 13C NMR (CDCl3): δ 172.9; 130.9;
120.5; 71.2; 63.8; 42.4; 41.4. HRMS (ESI+) for C7H14NO3 m/z:
[M + H]+ = 160.0974 (calcd); [M + H]+ = 160.0974 (found).
N-((2,2-Dimethyl-1,3-dioxolan-4-yl)methyl)but-3-enamide (4).
To a solution of 3 (12.000 g, 0.075 mol) in CH3CN (110 mL)
were added dimethoxypropane (10.2 mL, 0.082 mol) and a catalytic
amount of APTS under stirring. The reaction mixture was stirred at rt
for 4 h. Et3N was added dropwise until the pH reached ∼9, and the
reaction mixture was concentrated in vacuo. The resulting crude
compound was purified by flash chromatography (2:1 cyclohexane/
EtOAc) to afford compound 4 (10.500 g, 70%) as a colorless oil.
1H NMR (CDCl3): δ 6.20−5.75 (2H, m); 5.36 (1H, m); 5.11 (1H,
m); 4.24 (1H, m); 4.01 (1H, dd, J = 1.9 Hz, J = 6.5 Hz); 3.60 (1H, dd,
J = 2.0 Hz, J = 6.4 Hz); 3.55−3.25 (2H, m); 3.04 (2H, d, J = 7.5 Hz);
1.42 (3H, s); 1.34 (3H, s). 13C NMR (CDCl3): 171.0; 131.3; 119.8;
109.3; 74.4; 66.7; 41.4; 26.8; 25.3. HRMS (ESI+) for C10H18NO3 m/z:
[M + H]+ = 200.1287 (calcd); [M + H]+ = 200.1285 (found).
N-((2,2-Dimethyl-1,3-dioxolan-4-yl)methyl)-5,5,6,6,7,7,8,8,9,-
9,10,10,10-tridecafluoro-3-iododecanamide) (5). To a solution of 4
(0.200 g, 1.0 mmol) in anhydrous THF (5 mL) were added C6F13I
(0.282 mL, 1.3 mmol) and AIBN (0.099 g, 0.6 mmol) under stirring
and argon atmosphere. The reaction mixture was heated at 70 °C for
18 h in a sealed tube. After being cooled to rt, the reaction mixture was
concentrated in vacuo. The resulting crude compound was purified by
flash chromatography (2:1 cyclohexane/EtOAc) to afford compound 5
(0.355 g, 55%) as a white powder. 1H NMR (CDCl3): δ 5.90 (1H, bs);
4.70 (1H, m); 4.28 (1H, m); 4.05 (1H, dd, J = 1.9 Hz, J = 6.5 Hz);
3.79 (1H, dd, J = 2.0 Hz, J = 6.5 Hz); 3.52−3.21 (2H, m); 3.07−2.76
(4H, m); 1.46 (3H, s); 1.36 (3H, s). 13C NMR (CDCl3): δ 169.6;
We have synthesized two novel fluorinated surfactants whose
apolar domain comprises a perfluorohexane group in the main
chain and a butyl-hydrogenated side chain. The two com-
pounds 1 and 2 have rather low CMCs, ∼0.08 and ∼0.01 mM,
respectively, and they self-assemble into small aggregates
D
DOI: 10.1021/acs.joc.5b02137
J. Org. Chem. XXXX, XXX, XXX−XXX