Synthesis of a Biotinated Lipofullerene as a New Type of Transmembrane Anchor
FULL PAPER
J
(
1
ϭ J
m, 1 H, biotin–CH), 2.80 (dd, J
CHHexoS), 2.66 (d, J ϭ 12.7 Hz, 1 H, CHHendoS), 2.13 (t, J ϭ 7.6,
2
ϭ 5.4 Hz, 2 H, CH
2
NH), 3.20 (dt, 2 H, CH
ϭ 4.9 Hz, J ϭ 12.7 Hz, 1 H, δ ϭ 173.19 (1 C, CONH), 166.97, 166.50 (2 C, COO), 155.89 (1 C,
CONHboc), 79.23 [1 C, C(CH ], 70.09, 69.91, 65.65 (5 C, OCH ),
52.36 (1 C, OCH ), 41.30 (1 C, OCCH CO), 40.22, 39.02 (2 C,
): δ ϭ CH NH), 36.62 (1 C, CH CO), 29.54, 29.44, 29.40, 29.29, 29.23,
73.41, 164.20 (2 C, CO), 155.94 (1 C, CO boc), 79.06 (1 C, CCH ), 29.08 (12 C, CH ), 28.31 [3 C, C(CH ], 25.66 (1 C, CH ). – IR
9.95, 69.88 (4 C, CH
O), 61.65, 60.06 (2 C, CH), 55.59, (1 C, (KBr): ν˜ ϭ 3346, 3319, 3090, 2918, 2850, 1754, 1735, 1686, 1642,
NH), 38.96 (1 C, CH S), 35.78 (1 C, 1542, 1472, 1441, 1392, 1366, 1279, 1251, 1165, 1027, 971, 933,
), 28.15, 27.93, 25.48 (3 C, CH ). – IR 869, 782, 720, 689, 606, 461, 405 cm . – MS (FAB/NBA,
KBr): ν˜ ϭ 3298, 3088, 2974, 2930, 2869, 1706, 1646, 1552, 1530,
2 3 2 3
NHboc), 3.04 H, CCH
), 1.19 (m, 22 H, CH ):
). – 13C NMR (100.5 MHz, CDCl
1
2
3
)
3
2
2
1
1
6
2
H, CH CO), 1.51–1.67 (m, 4 H, biotin–CH
2
), 1.35 (s, 9 H, CH
3
),
3
2
.32 (m, 2 H, biotin–CH
2
). – 13C NMR (100.5 MHz, CDCl
3
2
2
3
2
3
)
3
2
2
CHS), 40.31, 40.15 (2 C, CH
CH CO), 28.26 (3 C, CH
(
2
2
–
1
2
3
2
ϩ
ϩ
C H
31 58
N
2
O
9
, calcd. 602.80): m/z ϭ 603 [M ] (21%), 503 [M
461, 1392, 1366, 1280, 1249, 1170, 1142, 1122, 859, 653, 603 boc] (100%). – C31 (602.8): calcd. C 61.77, H 9.70, N 4.65;
found C 61.22, H 9.67, N 5.14.
–
1
58 2 9
H N O
–1
38 4 6
cm . – MS (EI, 200 °C, C21H N O S, calcd. 474.62): m/z ϭ 474
ϩ
ϩ
ϩ
ϩ
[
M ], 401 [M – tBuO] (4%), 374 [M – boc] (17%), 332 [M
CH CH NHboc] (10%), 227 [biotinyl] (14%), 59 [C O] (90%),
1 (100%). – C21 S (474.3): calcd. C 53.14, H 8.07, N 11.80,
–
2
2
3 7
H
[
1
(
Methoxycarbonyl(29,29Ј-dimethyl-16,27-dioxo-20,23,28-trioxa-
7,26-diazatriacontyloxycarbonyl)]methano-1,2-dihydro[60]fullerene
9): To a mixture of malonate 8 (290 mg, 0.48 mmol), C60 (446 mg,
4
38 4 6
H N O
S 6.76; found C 52.83, H 7.94, N 12.20, S 5.76.
0
.62 mmol, 1.25 equiv.) and CBr
4
(160 mg, 0.48 mmol, 1 equiv.) in
Methyl {31-[(3aS,4S,6aR)-2-Oxohexahydro-1H-thieno[3,4-d]imid-
azol-4-yl]-16,27-dioxo-20,23-dioxa-17,26-diazahentriacont-1-yl}
Malonate (7): Complete deprotection of 6 (160 mg, 0.337 mmol)
2
50 mL of toluene was added DBU (82 µL, 0.53 mmol, 1.1 equiv.)
and the resulting mixture stirred for 12 h. After evaporation of the
solvent, separation by flash chromatography (SiO ; toluene/ethanol
:1, R ϭ 0.30) gave 185 mg of monoadduct 9 as a reddish brown
solid (29%). – H NMR (400 MHz, CDCl
H, cis-/trans-NH), 5.32, 4.97 (br, 1 H, cis-/trans-NH), 4.48 (t, J ϭ
.4 Hz, 2 H, OCH ), 4.07 (s, 3 H, OCH ), 3.58 (m, 4 H, OCH2-
CH O), 3.53 (t, J ϭ 5.0 Hz, 4 H, CH O), 3.43 (dt, J ϭ J ϭ 5 Hz,
H, CH NH), 3.30 (dt, 2 H, CH NHboc), 2.15 (t, J ϭ 7.5 Hz, 2
CO), 1.81 (m, 2 H, OCH CH ), 1.59 (m, 2 H, CH CH CO),
; s, 9 H, C(CH ], 1.33 (m, 2 H, CH ), 1.25 (m,
). – C NMR (100.5 MHz, CDCl ): δ ϭ 173.28, 164.11,
2
was achieved with 1.5 mL of TFA in 1.5 mL of CH
After evaporation to remove the excess acid, CH
2
Cl
Cl
2
after 2 min.
was added.
9
f
2
2
1
3
): δ ϭ 7.11, 5.98 (br, 1
The solution was neutralised with 120 µL of triethylamine and suc-
cessively washed with saturated NaHCO and a little cold water.
The dried organic phase was added to a mixture of malonate 3b
150 mg, 0.4 mmol) and CDI (195 mg, 1.2 mmol, 3 equiv.) after
3
6
2
3
2
2
1
2
(
2
2
2
stirring for 2 h. After stirring for 2 days at room temperature TLC
control (ethanol) remained unchanged and separation by flash
chromatography (SiO ; ethanol/diethyl ether 1:1) gave 7 (45 mg,
2
H, CH
2
2
2
2
2
1
1
1
1
1
7
.42 [m, 2 H, CH
8 H, CH
63.60, 155.94 (4 C, CO), 145.33, 145.26, 145.17, 145.11, 144.87,
44.67, 144.60, 143.87, 143.06, 142.99, 142.39, 142.19, 141.90,
2
)
3 3
2
1
3
1
2
3
1
6
(
8%) as a white solid. – H NMR (400 MHz, CDCl
.38, 6.37, 5.98 (4br, 4 H, NH), 4.47, 4.28 (2m, 2 H, CHNH), 4.11
), 3.72 (s, 3 H, OCH ), 3.58 (s, 4 H,
O), 3.53, (m, 4 H, OCH ), 3.41 (m, 4 H, CH
CO), 3.13 (m, 1 H, CHS), 2.86 (dd, J
3
): δ ϭ 6.67,
t, J ϭ 6.8 Hz, 2 H, OCH
2
3
2
40.95, 139.10, 138.90 (58 C, C60 sp -C), 79.38 [1 C, C(CH
3
)
3
],
), 53.98 (1 C,
), 52.17 (1 C, methano–C), 40.31, 39.11 (2 C, CH NH), 36.75
1 C, CH CO), 29.68, 29.61, 29.52, 29.41, 29.33, 29.21, 28.55 (11 C,
), 28.40 [3 C, C(CH ], 25.97, 25.75 (2 C, CH ). – IR (KBr):
OCH
2
CH
2
2
2
NH), 3.35
3
1.54 (2 C, C60 sp -C), 70.20, 70.02, 67.54 (5 C, OCH
2
(s, 2 H, OCCH
2
1
ϭ 8.8 Hz,
OCH
(
CH
3
2
J
2
2
2
ϭ 4.2 Hz, 1 H, CHHexoS), 2.71 (d, J ϭ 12.2 Hz, 1 H, CHHendoS),
.16 (2t, J ϭ 7.8 Hz, 2 H, CH CO), 1.59 (m, 8 H, CH ), 1.40 (m,
H, biotin–CH ), 1.22 (m, 24 H, CH
). – 13C NMR (100.5 MHz,
): δ ϭ 173.57, 167.06, 166.59, 156.39 (5 C, CO), 70.06, 70.02,
9.87 (4 C, CH O), 65.73 (1 C, CH OCO), 61.93, 60.35 (2 C,
CHNH), 55.48 (1 C, CHS), 52.42 (1 C, OCH ), 41.37 (1 C,
OCCH CO), 40.35 (1 C, CH S), 39.09 (2 C, CH NH), 36.62, 35.76
2 C, CH CO), 29.62, 29.51, 29.46, 29.38, 29.31, 29.15, 28.40,
8.12, 27.96, 25.73, 25.40 (16 C, CH
); IR (KBr): ν˜ ϭ 3386, 3287,
956, 2921, 2851, 1737, 1702, 1649, 1545, 1516, 1463, 1377, 1366,
2
2
2
2
3
)
3
2
2
2
ν˜ ϭ 3442, 3425, 2923, 2852, 1746, 1709, 1644, 1547, 1532, 1460,
CDCl
6
3
1
5
4
429, 1389, 1365, 1262, 1238, 1174, 1102, 1022, 800, 704, 666, 579,
25 cm . – UV/Vis (CHCl
26 (2900), 481 (1900), 683 nm (260).
2
2
–
1
3
): λmax (ε) ϭ 257 (120000), 326 (37000),
MS (FAB/NBA,
3
–
2
2
2
ϩ
ϩ
C
H
91 56
N
2
O
9
, calcd. 1321.43): m/z ϭ 1321 [M ] (4%), 1222 [M
boc] (27%), 720 [C60] (100%). – C91 (1321.4): calcd. C
2.71, H 4.27, N 2.12; found C 80.96, H 4.56, N 1.78.
–
(
2
56 2 9
H N O
2
2
1
2
8
–
1
331, 1265, 1147, 1028, 881, 815, 750, 720, 699, 587 cm . – MS
ϩ
(MALDI-Tof/CCA, C36
H
64
N
4
O
9
S, calcd. 728.98): m/z ϭ 768 [M
Bis(dodecyl) Malonate 10: A solution of dodecanol (1.86 mg,
10 mmol) and 0.74 mL of pyridine in 50 mL of dry CH Cl was
cooled to 0° C. Malonyl dichloride (0.44 mL, 4.54 mmol) in 5 mL
of dry CH Cl was added dropwise. The mixture was then allowed
to warm to room temperature and stirred for another 6 h. After
ϩ
ϩ K] (100%), 751 [M ϩ Na] (24%); MS (FAB/NBA): m/z ϭ 861
2
2
ϩ
ϩ
ϩ
[M ϩ Cs] (4%), 751 [M ϩ Na] (70%), 729 [M ] (76%).
2
2
Methyl (29,29Ј-Dimethyl-16,27-dioxo-20,23,28-trioxa-17,26-diaza-
triacontyl) Malonate (8): 4-Carbonyldiimidazole (50 mg, 2.8 mmol)
washing with water and drying with MgSO
; CH Cl /hexane 1:1, R
4
separation by flash
was added gradually to a solution of malonate 3b (416 mg, chromatography (SiO
.12 mmol) in dry THF under a nitrogen atmosphere until TLC
2
2
2
f
ϭ 0.37) gave a color-
1
less oil, which crystallised after a few days as a white solid (yield:
1
control (ethyl acetate/hexane 2:1) showed no more starting ma-
terial. To the imidazolide activated acid monoprotected diamine 4b
(
1.73 g, 86%). – H NMR (400 MHz, CDCl
6.7 Hz, 4 H, CH O), 3.37 (s, 2 H, OCCH
CH CH O), 1.26 (m, 36 H, CH ), 0.88 (t, J ϭ 6.6 Hz, 6 H, CH
C NMR (100.5 MHz, CDCl ): δ ϭ 166.71 (2 C, CO), 65.70
(CH O), 41.73 (1 C, OCCH CO), 31.94, 29.67, 29.60, 29.54, 29.38,
29.25, 28.50, 25.82, 22.71 (20C, CH ), 14.12 (2 C, CH ). – IR
(KBr): ν˜ ϭ 3464, 2956, 2926, 2855, 1756, 1739, 1467, 1412, 1380,
3
): δ ϭ 4.14 (t, J ϭ
CO), 1.64 (tt, 4 H,
). –
2
2
334 g, 1.34 mmol, 1.2 equiv.) was added. The mixture was stirred
for 3 days and, after evaporation of the solvent in vacuo, the prod-
uct 8 was separated by flash chromatography (SiO , diethyl ether/
ethanol 10:1) to give 435 mg (64%) of a white solid. – H NMR
400 MHz, CDCl ): δ ϭ 6.03, 5.00 (2br, 2 H, NH), 4.08 (t, J ϭ 6.6
Hz, 2 H, OCH ), 3.69 (s, 3 H, CH O), 3.55 (m, 4 H, OCH CH O), 1330, 1270, 1149, 1010, 893, 722, 685, 583 cm . – MS (EI, 80 °C,
.50 (t, J ϭ 5.2 Hz, 4 H, CH O), 3.40 (dt, J ϭ 5 Hz, 2 H,
NH), 2.12 (45%), 105 [M – C12 – C12] (100%). – C27
O), 1.39 (s, 9 73.59, H 11.89; found C 73.582, H 11.94.
2
2
2
3
1
3
3
2
2
2
1
2
3
(
3
–
1
2
3
2
2
ϩ
ϩ
3
2
1
ϭ J
2
27 52 4
C H O , calcd 440.70): m/z ϭ 441 [M ϩ H ], 273 [M – C12]
ϩ
2
CH NH), 3.33 (s, 2 H, OCCH
2
CO), 3.27 (dt, 2 H, CH
2
52 4
H O (440.7): calcd. C
2
(t, J ϭ 7.4 Hz, 2 H, CH CO), 1.59 (m, 4 H, CH
CH
2 2
Eur. J. Org. Chem. 2000, 1173Ϫ1181
1179