Article
Inorganic Chemistry, Vol. 48, No. 23, 2009 11237
The reaction of NO2 with Fe(Por) gives the 5-coordinate
nitrito complexes Fe(Por)(η1-ONO) (1),7a which react further
with volatile Lewis bases to form the 6-coordinate species for
which the N-bound nitro form Fe(Por)(L)(η1-NO2) is gen-
erally favored.7b However, when the reaction of 1 with L
was carried out at very low temperatures (<140 K), it was
possible to spectrally characterize the metastable nitrito
isomers Fe(Por)(L)(η1-ONO) where L=NO,7a,c NH3,7b or
tetrahydrofuran.7d With the first two, warming led to the
nitrito f nitro isomerization, whereas with THF, both
isomers were present over a narrow low temperature interval,
but THF dissociated upon further warming to restore the
nitrito complex 1.7d
Numerous heme proteins have proximal S-donor ligands,
either a cysteine thiolate or a methionine residue.8 In the
present study, the effect of the proximal thioethers dimethyl-
sulfide (DMS) and tetrahydrothiophene (THT) on heme
nitrite coordination and reactivity is addressed. In the course
of these studies, we also observed apparent oxygen atom transfer
(OAT) at ambient temperature from the nitrite complexes of
the ferric porphyrins to the R2S to give the corresponding
sulfoxides R2SO.
Fe(Por)(ONO) and this was confirmed by FTIR measure-
ments.7a The layered film of Fe(Por)(ONO) was cooled by
liquid nitrogen and small portions of DMS or THT were
introduced into the cryostat. The film was slowly warmed and
IR or UV-visible spectra (using CaF2 windows) were mea-
sured at different substrate temperatures determined by a
thermocouple. After the reaction was completed the cryostat
was shortly pumped out to remove the excess of supplied
ligands for obtaining FTIR spectra relatively free from the
bands of adsorbed S-donors.
In the experiments pursuing the study of oxo-transfer
reactivity of I measured quantities of the sulfur bases were
introduced into cryostat at room temperature and FTIR
spectra of the layers were measured over the course of time.
The layer was maintained under S-donors vapors overnight
after which the gaseous content of the cryostat was analyzed
by FTIR spectroscopy and mass spectrometry. For the first
purpose the gaseous content of the cryostat was deposited
through the injector to the cold (77 K) KBr substrate of
anothercryostat. The depositedlayer thusformedwas heated
in course of pumping until the temperatures at which the
excess R2S was completely eliminated from the deposit. The
FTIR spectra of remaining products were then measured.
The mass spectrometric measurements were performed using
a residual gas analyzer. At this point also the main part of the
excess R2S was pumped out from the cryostat at lowered
temperatures then the remaining mixture was introducedinto
the chamber of the gas analyzer through the variable leak
valve.
Heme nitrite complexes with proximal S-donor ligands
have been characterized only for sterically protected
porphyrins.4 An example is the ferrous “picket fence” por-
phyrinato complex [FeII(TpivPP)(PMS)(NO2)]- (TpivPP=
meso-tetrakis(o-pivalamido-phenyl)porphyrinato dianion,
PMS is the thioether pentamethylene sulphide.4a In this case,
The NO2 (15NO2) was obtained by oxidizing with excess
dioxygen NO (15NO) that was purified according to proce-
dure described elsewhere.7g This was then purified by frac-
tional distillation until a pure white solid was obtained. 15NO
with 98.5% enrichment was purchased from the Institute of
Isotopes, Republic of Georgia. DMS (Aldrich, 99%) and
THT(99þ%)werestoredovernightoversodiuminagastight
flask to remove trace quantities of thiols and water and were
vacuum distilled before using.
-
the NO2 is in the pocket formed by the four pivalamide
groups and is N-coordinated (nitro). Notably, the O-atoms
of the nitrite ion ligand are positioned at distances from NH-
groups of the pivalamide chains appropriate for H-bonding
interactions that might stabilize one isomer or another. In
this context, it was of interest to evaluate what structures
would be realized without such a stabilizing factor.
The FTIR spectra and UV-visible spectra were respec-
tively recorded using “Nexus” and “Helios γ” spectrophot-
ometersoftheThermoNicolet Corporation andmassspectra
were recorded by residual gas analyzer “RGA-200” of Stan-
ford Research Systems. The spectral slit width during FTIR
Experimental Section
Low temperature sublimates of the ferrous porphyrinates
Fe(Por) were prepared as described previously7a by heating
the hexacoordinateFe(Por)(B)2 complexes (B is pyridine (Py)
or piperidine) in a Knudsen cell at ∼470 K under high
vacuum (P = 3 ꢀ 10-5 Torr) to eliminate the labile axial
ligands. The Knudsen cell was then heated to 520 K, where-
upon Fe(Por) sublimed onto the 77 K surface of the KBr or
CaF2 substrate cooled by liquid nitrogen to give sponge-like
metallo-arylporphyrinato layers with high microporosity.7e
Once Fe(Por) layers of thickness sufficient for UV-visible
and IR spectral studies were formed (0.3-2.0 h), they were
heated to room temperature under dynamic vacuum. Small
increments of NO2 (15NO2) gas were then introduced for ∼30s
after which the apparatus was evacuated. During this procedure
the redFe(Por) film turnedbrown indicating the formation of
measurements was 2 cm-1
.
Unrestricted density functional theory (DFT) optimiza-
tion calculations were performed with the Spartan’04 (Wave
function, Inc.) orJaguar6.0(Schrodinger, Inc.)attheB3LYP
level using the LACVP* basis set without symmetry con-
straints. The optimized structures represent the equilibrium
geometries of the molecules in gas phase. The calculations
were performed on a Dell Precision 490 dual core Xeon 3.0 GHz
CPU workstation or a custom built core 2 duo 3.0 Ghz
Pentium CPU workstation.
Results and Discussion
To study the reactions with the thioethers, the 5-coordinate
nitrito complexes Fe(Por)(η1-ONO) (1) were prepared on the
KBr or CaF2 substrates in the vacuum cryostat as described
above and the temperature was lowered to <140 K. Small
amounts of a thioether, either dimethyl sulfide or tetrahy-
drothiophen, were then introduced into the cryostat as gas
whereupon they condensed onto the substrate covered with
the microporous layers of 1. For temperatures <140 K for
DMS and <160 K for THT there were no changes in the
intensities of FTIR bands characteristic of the coordinated
nitrito moiety of 1, and the only new spectral features were
those attributed to the S-donors adsorbed on the layers.
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