Journal of Medicinal Chemistry
ARTICLE
Haromatic), 6.51 (d, 2 H, Hallyl, 3JE = 13.5 Hz), 4.29 (t, 4 H, 2 ꢁ NCH2, 3J =
7.5Hz), 2.20(t, 4H, 2ꢁ CH2CO2H, 3J= 7.2 Hz), 2.11 (s, 12 H, 4 ꢁ CH3),
1.96ꢀ1.88 (m, 8 H, 4 ꢁ CH2), 1.60ꢀ1.50 (m, 8 H, 4 ꢁ CH2), 1.49ꢀ1.40
(m, 4 H, 2 ꢁ CH2), 1.33ꢀ1.30 ppm (m, 8 H, 4 ꢁ CH2). 13C NMR (100
MHz, CD3OD): δ = 175.9, 149.3, 139.4, 133.5, 132.2, 130.5, 129.8, 127.9,
127.5, 124.9, 121.9, 110.8, 101.6, 51.0, 44.0, 28.9, 28.9, 28.8, 27.4, 26.6, 26.3,
25.2, 16.9 ppm. UV/vis (ethanol): λmax (Erel) 594 (1.0), 555 nm (0.65).
UV/vis (solid state/cotton): λmax (Erel) 569 (1.0), 557 nm (0.99). UV/vis
(solid state/wool): λmax (Erel) 565 (1.0), 597 nm (0.90). UV/vis (solid
state/hair): λmax (Erel) 603 (1.0), 557 nm (0.95). Fluorescence (ethanol):
λmax (Irel) 604 (1.0), 651 nm (0.25). Fluorescence (solid state/cotton):
λmax (Irel) 669 (1.0), 645 nm (0.94). Fluorescence (solid state/wool): λmax
(Irel) 632 (1.0), 668 nm (0.89). Fluorescence (solid state/hair): λmax (Irel)
3,30-Di-(11-carboxyundecyl)-1,1,10,10-tetramethyl-1H-dibenz[e]indo-
carbocyanine Bromide (3g). 3-(11-Carboxyundecyl)-1,1,2-trimethyl-1H-
benz[e]indolenium bromide (2g, 340 mg, 7.00 μmol), 3-picoline
(1.00 mL), and orthoformic triethylester (0.020 mg, 0.020 mL, 0.014
mmol) were allowed to react as was described for 3,30-di-(2-carboxyethyl)-
1,1,10,10-tetramethyl-1H-dibenz[e]indocarbocyanine bromide (3a) (chro-
matography with aqueous 2 N HCl instead of acetic acid). Yield, 12.0 mg
(19%) of golden shiny solid forming violet, red fluorescent solutions. Rf (RP
18, methanol/H2O/HCl 10:1:0.4) = 0.8. IR (ATR): ν = 3350 (w), 2922
(s), 2851 (m), 1710 (m), 1625 (w), 1587 (w), 1553 (s), 1519 (m), 1479
(m), 1422 (s), 1356 (m), 1278 (w), 1259 (w), 1224 (m), 1169 (m), 1141
(w), 1127 (m), 1012 (m), 973 (w), 931 (s), 896 (w), 806 (m), 786 (w),
746 (w), 726 (w), 685 (w), 675 (w) cmꢀ1. 1H NMR (400 MHz, CD3OD):
δ = 8.78 (t, 2 H, Hallyl, 3JE = 13.5 Hz), 8.29 (d, 2 H, Haromatic, 3J = 8.5 Hz),
8.06 (d, 2 H, Haromatic, 3J = 8.8 Hz), 8.03 (d, 2 H, Haromatic, 3J = 8.2 Hz), 7.68
(ddd, 3 H, Haromatic, 4J = 1.2 Hz, 3J = 6.9 Hz, 3J = 8.4 Hz), 7.64 (d, 2 H,
Haromatic, 3J = 8.9 Hz), 7.53 (ddd, 2 H, Haromatic, 4J = 0.9 Hz, 3J = 6.9 Hz, 3J =
8.0 Hz), 6.50 (d, 2 H, Hallyl, 3JE = 13.5 Hz), 4.29 (t, 4 H, 2 ꢁ NCH2, 3J = 7.4
Hz), 2.18 (t, 4 H, 2 ꢁ CH2CO2H, 3J = 7.4 Hz), 2.11 (s, 12 H, 4 ꢁ CH3),
1.96ꢀ1.88 (m, 4 H, 2 ꢁ CH2), 1.57ꢀ1.49 (m, 8 H, 4 ꢁ CH2), 1.47ꢀ1.40
(m, 4 H, 2 ꢁ CH2), 1.36ꢀ1.28 ppm (m, 20 H, 10 ꢁ CH2). 13C NMR
(100 MHz, CD3OD): δ = 178.6, 175.9, 149.2, 139.4, 133.5, 132.2, 130.5,
129.7, 127.9, 127.5, 124.9, 121.9, 110.8, 101.7, 56.9, 51.0, 44.0, 29.1, 29.0,
29.0, 29.0, 28.9, 27.3, 26.6, 26.3, 25.4, 16.9 ppm. UV/vis (ethanol): λmax
(Erel) 590 (1.0), 553 nm (0.70). UV/vis (solid state/cotton): λmax (Erel)
600 (1.0), 555 nm (0.97). UV/vis (solid state/wool): λmax (Erel) 603 (1.0),
556 nm (0.95). UV/vis (solid state/hair): λmax (Erel) 607 (1.0),
556 nm (0.93). Fluorescence (ethanol): λmax (Irel) 604 (1.0), 656 nm
(0.20). Fluorescence (solid state/cotton): λmax (Irel) 667 (1.0), 643 nm
(0.94). Fluorescence (solid state/wool): λmax (Irel) 638 (1.0), 667 nm
(0.93). Fluorescence (solid state/hair): λmax (Irel) 634 (1.0), 668 nm
635 (1.0), 666 nm (0.87). Fluorescence quantum yield (CHCl3, λexc
=
557 nm, E562/1cm = 0.0180; reference: S-13 with Φ = 1.00): 0.59. HRMS
(ESI) (C51H65N2O4þ): calcd, 769.4939; found, 769.4941; Δ = 0.2 mmu.
3,30-Di-(10-carboxydecyl)-1,1,10,10-tetramethyl-1H-dibenz[e]indocar-
bocyanine Bromide (3f). 3-(10-Carboxy-decyl)-1,1,2-trimethyl-1H-benz-
[e]indolenium bromide (2f, 117 mg, 0.25 mmol), pyridine (2.5 mL), and
orthoformic triethylester (0.08 mL, 0.5 mmol) were allowed to react
(120 °C) as was described for 3,30-di-(2-carboxyethyl)-1,1,10,10-tetra-
methyl-1H-dibenz[e]indocarbocyanine bromide (3a). Yield, 118 mg
(54%) of golden shiny solid forming violet, red fluorescent solutions. IR
(ATR): ν = 3381 (w), 3056 (w), 2923 (s), 2852 (s), 2350 (w), 2287 (w),
1711 (m), 1626 (w), 1588 (w), 1554 (s), 1520 (m), 1479 (m), 1423 (s),
1357 (m), 1277 (w), 1224 (m), 1012 (m), 971 (w), 930 (s), 898 (w), 867
(0.88). Fluorescence quantum yield (CHCl3, λexc = 560 nm, E562/1cm
0.0127; reference: S-13 with 1.00): 0.35. HRMS (ESI)
(C55H73N2O4þ): calcd, 825.5565; found, 825.5567; Δ = 0.2 mmu.
=
Φ
=
Synthesis of Carbocyanine Dyes with Methylester Groups
(w), 806 (m), 786 (w), 746(w), 726 (w), 685 (w), 676(w), 652 (m) cmꢀ1
.
1H NMR (400 MHz, CD3OD): δ=8.77(t, 1H, CHallyl, 3JE = 13.4 Hz), 8.29
(d,2H,CHaromatic,3J=8.6Hz),8.05(d,2H, CHaromatic, 3J=8.7Hz),8.02(d,
2 H, CHaromatic, 3J = 8.4 Hz), 7.70ꢀ7.62 (m, 4 H, CHaromatic), 7.52 (t, 2 H,
CHaromatic, 3J= 7.5 Hz), 6.50 (d, 2 H, CHallyl, 3JE = 13.6 Hz), 4.28(t, 4 H, 2ꢁ
NCH2, 3J= 7.1 Hz), 2.30ꢀ2.13(m, 4H, 2ꢁ CH2CO2H), 2.10 (s, 12 H, 4 ꢁ
CH3), 1.98ꢀ1.88 (m, 4 H, 2 ꢁ CH2), 1.58ꢀ1.50 (m, 8 H, 4 ꢁ CH2),
1.35ꢀ1.22 ppm(m, 20 H, 10ꢁ CH2). 13C NMR (100 MHz, CD3OD): δ=
175.9, 149.2, 139.4, 133.5, 132.2, 131.3, 130.5, 129.7, 127.9, 127.5, 124.9,
121.9, 114.7, 110.8, 101.6, 51.0, 44.0, 29.0, 29.0, 28.9, 27.4 26.6, 26.3, 22.8
ppm. UV/vis (ethanol): λmax (Erel) 590 (1.0), 553 nm (0.70). UV/vis (solid
state/cotton): λmax (Erel) 597 (1.0), 555 nm (0.99). UV/vis (solid state/
wool): λmax (Erel) 557 (1.0), 596 nm (0.96). UV/vis (solid state/hair): λmax
(Erel) 601 (1.0), 556 nm (0.97). Fluorescence (ethanol): λmax (Irel) 610
(1.0), 656 nm (0.54). Fluorescence (solid state/cotton): λmax (Irel) 670
(1.0), 641 nm (0.83). Fluorescence (solid state/wool): λmax (Irel) 667 (1.0),
641 nm (0.98). Fluorescence (solidstate/hair):λmax (Irel) 640 (1.0), 667 nm
3,30-Di-(2-methoxycarbonylethyl)-1,1,10,10-tetramethyl-1H-dibenz-
[e]indocarbocyanine Bromide (3h). 3-(2-Methoxycarbonylethyl)-1,1,2-
trimethyl-1H-benz[e]indolenium bromide (2h, 300 mg, 0.797 mmol),
3-picoline (2.0 mL), and orthoformic triethylester (0.26 mL, 1.60 mmol)
were allowed to react (100 °C) as was described for 3,30-di-(2-carb-
oxyethyl)-1,1,10,10-tetramethyl-1H-dibenz[e]indocarbocyanine bromide
(3a) and isolated wihout chromatography. Yield, 290 mg (53%) of golden
shiny solid forming violet, red fluorescent solutions. IR (ATR): ν = 2925
(s), 2856 (w), 2541 (w), 1960 (w), 1722 (s), 1625 (m), 1567 (m), 1555
(s), 1519 (m), 1476 (m), 1422 (s), 1352 (m), 1278 (m), 1232 (w), 1155
(m), 1126 (w), 1011 (m), 924 (m, br), 875 (w), 804 (m), 786 (w), 804
(m), 786 (w), 744 (m) cmꢀ1. 1H NMR (200 MHz, CD3OD): δ = 8.42 (t,
2 H,Hallyl, 3JE =13.4 Hz),8.11(d, 4H,Haromatic, Hallyl, 3J=8.0 Hz), 7.96(d,
2 H, Haromatic, 3J = 8.5 Hz), 7.40ꢀ7.30 (m, 4 H, Haromatic), 7.16 (t, 2 H,
Haromatic, 3J = 7.5 Hz), 6.38 (d, 2 H, Hallyl, 3JE = 13.4 Hz), 4.35ꢀ4.30 (m, 4
H, 2 ꢁ NCH2), 3.31 (s, 6 H, 2 ꢁ OCH3), 2.68 (t, 4 H, 2 ꢁ CH2CO2CH3,
3J = 6.6 Hz), 1.71 ppm (s, 12 H, 4 ꢁ CH3). 13C NMR (100 MHz,
CD3OD): δ = 177.7, 172.5, 151.1, 140.5, 134.9, 133.7, 131.9, 131.3, 131.2,
129.3, 129.0, 126.5, 123.5, 112.3, 52.5, 41.5, 33.0, 28.2, 24.2 ppm. UV/vis
(0.93). Fluorescence quantum yield (CHCl3, λexc = 557 nm, E562/1cm
0.0131; reference: S-13 with 1.00): 0.33. HRMS (ESI)
(C53H69N2O4þ): calcd, 797.5252; found, 797.5267; Δ = 1.5 mmu.
=
Φ
=
3908
dx.doi.org/10.1021/jm2001986 |J. Med. Chem. 2011, 54, 3903–3925