J. Stenger-Smith et al.
JournalofInorganicBiochemistry185(2018)80–85
2.3. X-ray crystallography
Colorless and light yellow block-shaped crystals of complexes
1.0.5CH2Cl2 and 2 respectively were obtained by recrystallization
through diffusion of hexanes into their dichloromethane (CH2Cl2) so-
lutions. In case of 1, a suitable crystal was selected and mounted on a
Bruker D8 Quest diffractometer equipped with PHOTON II detector
operating at T = 298 K. Data were collected with ω shutterless scan
technique using graphite monochromated Mo-Kα radiation
(λ = 0.71073 Å) In case of 2, a suitable single crystal was selected and
mounted on a Bruker APEX-II CCD diffractometer with graphite
monochromated Mo-Kα radiation (λ = 0.71073 Å). In this case the
crystal was also kept at T = 298 K during data collection and unit cell
determination. Data were measured using ω scan technique. The total
number of runs and images for both data collections was based on the
strategy calculation from the program APEX3 (Bruker) [17]. The max-
imum resolution achieved was θ = 28.4° for 1 and θ = 24.2° for 2. Cell
parameters were retrieved using the SAINT (Bruker) software [18] and
refined using SAINT (Bruker) on 9525 reflections for 1 and on 8496
reflections for 2. Data reduction was performed using the SAINT
(Bruker) software, which corrects for Lorentz polarization. The final
completeness is 99.6% out to 28.4° in θ for 1 and 98.8% out to 24.2° in
θ for 2. Multi-scan absorption corrections were performed with both
data sets using SADABS 2016/2 and SADABS 2014/5 respectively for 1
and 2 [19]. The absorption coefficient for 1 is 4.88 mm−1 and for 2 is
4.29 mm−1. Minimum and maximum transmissions for 1 are 0.499 and
0.746 and the corresponding values for 2 are 0.573 and 0.745. The
structures of 1 and 2 were solved in the space group C2/c (No. 15) and
Pbca (No. 61) respectively by intrinsic phasing using the ShelXT [20]
structure solution program and refined by full matrix least squares on
F2 using version 2016/6 of ShelXL [21]. All non‑hydrogen atoms were
refined anisotropically in both cases. Hydrogen atom positions were
calculated geometrically and refined using the riding model. In case of
1, there are two crystallographically independent molecules within the
asymmetric unit, while for 2 one full molecule is present in the asym-
metric unit. Calculations and molecular graphics were preformed using
SHELXTL 2014 and Olex2 [22] programs. Crystal data and structure
refinement parameters are included in Table 1 while the bond distances
Scheme 1. Structures of the Ag complexes derived from pbt and qbt.
triphenylphosphine. The antibacterial properties of 1 and 2 against two
Gram-negative bacteria namely, Acinetobacter baumannii and Pseudo-
monas aeruginosa have been evaluated using a skin and soft tissue in-
fection (SSTI) model previously developed in our laboratory.
2. Experimental methods
2.1. Materials and methods
All reagents and solvents were of commercial grade and used
without further purification. (PPh3)AuCl and AgOTf were procured
from Sigma. The ligands pbt [15] and qbt [16] were synthesized ac-
cording to reported procedures. FTIR, UV–Vis, and emission spectra
were obtained using Perkin-Elmer Spectrum-One, Varian Cary 50, and
Agilent Cary Eclipse spectrophotometers respectively. The 1H-, 19F and
31P NMR spectra of the ligands and the complexes were recorded using
a Varian Unity Inova 500 MHz instrument at 298 K.
2.2. Synthesis of complexes
2.2.1. Synthesis of [(PPh3)Au(pbt)](OTf) (1)
To a solution of AgOTf (54.8 mg, 0.213 mmol) in 10 mL of methanol
was added a solution of (PPh3)AuCl (100.5 mg, 0.203 mmol) in 15 mL
of chloroform. After stirring for 30 min the white AgCl precipitate was
filtered through a bed of celite. To the filtrate was added a solution of
pbt (43.1 mg, 0.203 mmol) in 10 mL of chloroform and the mixture was
set to reflux for 18 h. The solution was again filtered through celite to
remove traces of black particles. The volume of the filtrate was then
reduced to approximately 4 mL and 15 mL of hexane was added. The
white solid thus formed was collected by filtration and dried in vacuo
(131.0 mg, 78.6% yield). Layering hexanes over a dichloromethane
(CH2Cl2) solution of this solid afforded colorless crystals of 1. Anal.
Calcd for C31H23AuN2O3PS2F3: C, 45.37; H, 2.83; N, 3.41; found: C,
45.48; H, 2.79; N, 3.37. IR (KBr, cm−1): 3468 (w), 3056 (w), 1459 (w)
1436 (m), 1267 (s), 1154 (m), 1032 (m), 763 (m), 695 (m), 546 (m). 1H
NMR (CDCl3, ppm): 8.62 (d, 1H), 8.40 (d, 1H), 8.25 (t, 1H), 8.12 (d,
1H), 8.01 (d, 1H), 7.83 (t, 1H), 7.63–7.55 (m, 17H). 31P NMR (CDCl3,
ppm from PPh3): 35.90.
Crystal data for complex 1 (CCDC 1824282) and 2 (CCDC 1824283)
have been included in the Supplementary data section. These data can
be obtained free of charge from The Cambridge Crystallographic Data
2.4. Bacterial studies
The SSTI model previously developed in our lab [23] was employed
for antimicrobial studies. This uses a soft upper agar layer of evenly-dis-
persed bacterial “lawn” at the top of a nutrient rich bottom agar layer.
Such arrangement allows the bacteria to move slowly into the bottom
layer following the nutrient gradient, much like ditching of surface bac-
teria into the inner layers of skin and soft tissue. Different dilutions of A.
baumannii and P. aeruginosa were employed to grow ideal lawns in these
SSTI models. For A. baumannii, a frozen stock of bacteria was first streaked
on an LB plate and incubated for 18 h. A single colony of bacteria was
selected and grown in LB broth for another 18 h. The suspension was di-
luted with fresh LB until an A600 of 0.8 was reached. A batch of 100 mL of
0.8% (w/v) agar with 1% NaCl was prepared, autoclaved and cooled to
47 °C before addition of 80 μL of the diluted bacterial suspension. This
solution was gently vortexed and aliquots of 8 mL of it were spread evenly
over of the surface of six 100 × 15 mm2 plates prepared with 20 mL of
1.5% (w/v) TSB agar (hard nutrient-rich layer). The plates were then in-
cubated at 37 °C for 2 h to facilitate adhesion of the bacteria to the nu-
trient-rich bottom layer and cell-to-cell contact. For P. aeruginosa, the same
procedure was followed to prepare the SSTI model. Here, the bacterial
suspension in LB medium was diluted to an A600 of 0.5 and 120 μL of it
2.2.2. Synthesis of [(PPh3)Au(qbt)](OTf) (2)
The same procedure as above using qbt as the ligand. Complex 2
was isolated as a light yellow solid (60.1 mg, 75.0%). Layering hexanes
over a solution of 2 in dichloromethane afforded pale yellow crystals of
[(PPh3)Au(qbt)](OTf). Anal. Calcd for C35H25AuN2O3PS2F3: C, 48.28;
H, 2.89; N, 3.22; found: C, 48.02; H, 2.91; N, 3.12. IR (KBr, cm−1):
3436 (w), 3056 (w), 1436 (w), 1263 (s), 1156 (m), 1031 (m), 762 (m),
696 (m), 545 (m). 1H NMR (CDCl3, ppm): 8.76 (d, 1H), 8.52 (d, 1H)
8.23 (d, 1H), 8.19 (d, 1H), 8.06 (d, 1H) 7.69–7.53 (m, 19 H) 7.46 (t,
1H).
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