6
02 JOURNAL OF CHEMICAL RESEARCH 2016
were found to exhibit slight to moderate activities against the
mentioned organisms.
Completion of the reaction was monitored by TLC using n-hexane-
EtOAc (15:10). The solvent was evaporated under reduced pressure,
water was added and the product was filtered off.
Conclusion
4-Methyl-2-(pyrrolidin-1-yl)-7,8-dihydro-5H-pyrimido[4,5-d]
thiazolo[3,2-a]pyrimidine (4a): Light yellow solid; m.p. 346–348 °C;
The objective of the present study was to synthesise, assign the
regiochemistry of heterocyclisation and investigate the antibacterial
activity of new pyrimido[4,5-d]thiazolo[3,2-a]pyrimidine
derivatives. The newly tested synthesised compounds 4c and 4d
were found to exhibit essentially equipotent antibacterial activity
against Streptococcus equinus and Streptococcus pneumonia,
respectively, compared with ceftriaxone and cefazolin as reference
drugs. The results suggest that pyrimido[4,5-d]thiazolo[3,2-a]
pyrimidine derivatives emerge as valuable compounds with great
potential to be used as antibacterial agents. Hence, it is concluded
that there is a promising scope for further development in this field.
−1
yield 69%; IR (KBr disc) (ν cm ): 2998, 2956, 2860, 1666, 1567;
max
1
H NMR (300 MHz, CDCl ): δ 1.94 (t, J = 6.6 Hz, 4H, CH ), 2.15
3
2
(
s, 3H, CH ), 3.29 (t, J = 7.2 Hz, 2H, CH S), 3.57 (t, J = 6.6 Hz, 4H,
3
2
13
CH N), 3.71 (t, J = 7.2 Hz, 2H, CH N), 4.41 (s, 2H, CH N); C NMR
2
2
2
(
2
75 MHz, CDCl ): δ 171.2, 162.3, 160.8, 160.7, 96.0, 54.0, 46.6, 45.8,
3
+
5.6, 25.5, 20.7; MS m/z: 275 (M ), 247, 205, 70, 28. Anal. calcd for
C H N S: C, 56.70; H, 6.22; N, 25.43; S, 11.64; found: C, 56.62; H,
13
17
5
6
.18; N, 25.38; S, 11.57%.
-(4-Methyl-7,8-dihydro-5H-pyrimido[4,5-d]thiazolo[3,2-a]
pyrimidin-2-yl)morpholine (4b): White solid; m.p. 236–238 °C; yield
4
−1
1
7
(
3
0%; IR (KBr disc) (νmax cm ): 2921, 2855, 1575, 1422, 745; H NMR
300 MHz, CDCl ): δ 2.17 (s, 3H, CH ), 3.32 (t, J = 7.2Hz, 2H, CH S),
3
3
2
Experimental
13
.74–3.81 (m, 10H, CH O, CH N), 4.45 (s, 2H, CH N); C NMR (75
2
2
2
Melting points were recorded on an Electrothermal type 9100 melting point
apparatus. The IR spectra were obtained on an Avatar 370 FTIR Thermo
Nicolet spectrophotometer and only noteworthy absorptions are listed. The
H NMR (300 MHz) and the C NMR (75 MHz) spectra were recorded
on a Bruker Avance DRX-300 Fourier transform spectrometer. Chemical
shifts were reported in ppm downfield from TMS as the internal standard.
The mass spectra were scanned on a Varian Mat CH-7 instrument at 70
eV. Elemental analyses were performed on a Thermo Finnigan Flash EA
MHz, CDCl ): δ 20.8, 25.7, 44.3, 45.8, 54.0, 66.9, 97.2, 161.1, 161.8,
3
+
162.3, 171.7; MS m/z: 291 (M ), 205, 177, 42, 29. Anal. calcd for
C H N OS: C, 53.59; H, 5.88; N, 24.04; S, 11.00; found: C, 53.52; H,
13
17
5
1
13
5.81; N, 23.98; S, 11.09%.
4-Methyl-2-(piperidin-1-yl)-7,8-dihydro-5H-pyrimido[4,5-d]
thiazolo[3,2-a]pyrimidine (4c): Cream-coloured solid; m.p 189–191 °C;
−
1
yield 90%; IR (KBr disc) (ν cm ): 2930, 2850, 1576, 1542, 1421,
max
1
1303, 1182, 747; H NMR (300 MHz, CDCl ): δ 1.57–1.65 (m, 6H, CH ),
2.15 (s, 3H, CH ), 3.31 (t, J = 7.2 Hz, 2H, CH S), 3.65 (t, J = 7.2 Hz, 2H,
3 2
3
2
1
112 microanalyser. Geometry optimisation and frequency calculations
30
+
were carried out with the Gaussian 09 package. B3LYP density functional
CH N), 3.69–3.79 (m, 4H, CH ), 4.42 (s, 2H, CH N); MS m/z: 289 (M ),
2
2
2
31
theory code was utilised for all calculations along the 6-311++g(2d,p)
basis set applied to all atoms, with no symmetrical restriction for 1 and 2
input structures. No imaginary frequency was observed in frequency
calculations on geometrically optimised 1 and 2 models to ensure that they
located at their true local minimum of energy. All optimised coordination
for 1 and 2 are available in the Electronic Supplementary Information.
Solutions of all derivatives and antibiotics were prepared in DMSO and
double-distilled water. All tests were repeated three times and the results
were expressed as the average of three independent experiments. Gram-
negative and Gram-positive bacterial strains were prepared from Iranian
Research Organization for Science and Technology (IROST). All bacteria
were cultured on nutrient agar (HiMedia, India) and incubated for 24 h at
205, 178, 124, 84, 54, 28. Anal. calcd for C H N S: C, 58.10; H, 6.62; N,
14 19 5
24.20; S, 11.08; found: C, 58.05; H, 6.57; N, 24.14; S, 11.01%.
4-Methyl-2- (4-methylpiperidin-1-yl) -7,8 - dihydro-5 H-
pyrimido[4,5-d]thiazolo[3,2-a]pyrimidine (4d): White solid; m.p.
−1
128–130 °C; yield 60%; IR (KBr disc) (ν cm ): 3002, 2949, 2918,
max
1
2859, 1572, 1544, 1423, 1357, 970, 790; H NMR (300 MHz, CDCl ):
3
δ 0.96 (d, J = 6.0 Hz, 3H, CH ), 1.08–1.20 (m, 2H, CH ), 1.57–1.69
3
2
(m, 3H, CH, CH ), 2.14 (s, 3H, CH ), 2.78 (td, J = 11.4 Hz, 1.5 Hz, 2H,
2
3
CH S), 3.30 (t, J = 7.2 Hz, 2H, CH N), 3.71 (t, J = 7.2 Hz, 2H, CH N),
2
2
2
13
4.41 (s, 2H, CH ), 4.79 (d, J = 12.9 Hz, 2H, CH N); C NMR (75 MHz,
2
2
CDCl ): δ 171.2, 161.9, 161.0, 96.1, 45.9, 31.4, 44.1, 34.1, 20.9, 25.6,
3
+
22.0: MS m/z: 303 (M ), 271, 204, 178, 93, 69, 56, 42, 29. Anal. calcd
37 °C under normal atmospheric air, except Streptococcus equinus and
for C H N S: C, 59.38; H, 6.98; N, 23.08; S, 10.57; found: C, 59.31; H,
15
21
5
Streptococcus pneumoniae, which were incubated in an atmosphere of 5%
6.92; N, 23.01; S, 10.49%.
CO . Finally, a bacterial suspension with concentration of 0.5 McFarland
4-Methyl-2- (4-methylpiperazin-1-yl) -7,8 - dihydro-5H-
pyrimido[4,5-d]thiazolo[3,2-a]pyrimidine (4e): Light yellow solid;
2
8
−1
(1.5 × 10 CFU mL ) in Müller-Hinton broth (HiMedia, India) was
−1
obtained spectrophotometrically. Antibacterial activities were tested
m.p. 260–262 °C (dec.); yield 70%; IR (KBr disc) (ν cm ): 2920,
max
25,26
1
according the literature procedures.
2851, 1568, 1530, 1417, 1374, 1259, 758; H NMR (300 MHz, CDCl ):
3
δ 2.16 (s, 3H, CH ), 2.35 (s, 3H, CH ), 2.47 (t, 4H, J = 5.1 Hz, CH N),
3
3
2
2
-Chloro-4-methyl-7,8-dihydro-5H-pyrimido[4,5-d]thiazolo[3,2-a]
3
.31 (t, 2H, J = 7.2 Hz, CH S), 3.73 (t, 2H, J = 7.2 Hz, CH N), 3.87 (t, 4H,
2
2
pyrimidine (3)
13
J = 4.8 Hz, CH N), 4.44 (s, 2H, CH N); C NMR (75 MHz, CDCl ): δ
2
2
3
To a magnetically stirred solution of 2,4-dichloro-5-(chloromethyl)-6-
methylpyrimidine, compound 1 (0.21 g, 1 mmol) and 4,5-dihydrothiazol-
1
66.8, 157.1, 156.3, 92.1, 49.2, 24.9, 41.1, 38.8, 20.9, 16.1; MS m/z: 304
+
(
M ), 277, 204, 148, 71, 57, 29. Anal. calcd for C H N S: C, 55.24; H,
14 20 6
2-amine 2 (0.11 g, 1 mmol), which was cooled in ice diisopropylethylamine
6
.62; N, 27.61; S, 10.53; found: C, 55.19; H, 6.56; N, 27.57; S, 10.47%.
-Methyl-2- (4-phenylpiperazin-1-yl) -7,8 - dihydro-5H-
pyrimido[4,5-d]thiazolo[3,2-a]pyrimidine (4f): White solid; m.p.
(DIPEA) (0.4 g, 3 mmol), was added dropwise. Then the mixture was
4
stirred at 0° C for 7 h. The progress of the reaction was monitored by TLC
using chloroform-methanol (30:3). The solvent was evaporated under
reduced pressure, water was added and the residue was filtered off to give
compound 3 as: White solid; m.p. 170–172 °C; yield 50%; IR (KBr disc)
−1
2
1
3
02–204 °C; yield 60%; IR (KBr disc) (ν cm ): 2929, 2852, 1566,
max
1
537, 1443, 1233, 1156, 757; H NMR (300 MHz, CDCl ): δ 2.18 (s,
H, CH ), 3.22 (t, 4H, CH N), 3.32 (t, 2H, CH S), 3.65–3.80 (m, 6H,
3
−1
1
3
2
2
(
2
νmax cm ): 2956, 2856, 1565, 1534, 1468; H NMR (400 MHz, CDCl ): δ
3
CH N), 4.45 (s, 2H, CH N), 6.89 (t, J = 7.2 Hz, 1H, phenyl ring), 6.98
2
2
.16 (s, 3H, CH ), 3.30 (t, J = 7.3 Hz, 2H, CH S), 3.70 (t, J = 7.3 Hz, 2H,
3
2
(d, 2H, J = 7.8 Hz, phenyl ring), 7.29 (t, 2H, J = 7.8 Hz, phenyl ring);
+
CH N), 4.42 (s, 2H, CH N); MS m/z: 241 (M ), 211, 137, 77, 28. Anal. calcd
for C H ClN S: C, 44.91; H, 3.77; Cl, 14.73; N, 23.28; S, 13.32; found: C,
4
13
2
2
C NMR (75 MHz, CDCl ): δ 171.6, 161.8, 161.1, 129.1, 151.5, 119.8,
3
9
9
4
116.4, 97.1, 49.4, 25.7, 45.8, 43.7; MS m/z: 366 (M ), 244, 205, 146, 119,
+
4.85; H, 3.71; N, 23.19; S, 13.24%.
1
06, 76, 60, 41. Anal. calcd for C H N S: C, 62.27; H, 6.05; N, 22.93;
19 22 6
Synthesis of pyrimido[4,5-d]thiazolo[3,2-a]pyrimidines (4a–f);
S, 8.75; found: C, 62.23; H, 5.98; N, 22.87; S, 8.69%.
general procedure
Electronic Supplementary Information
To a mixture of 2-chloro-4-methyl-7,8-dihydro-5H-pyrimido[4,5-d]
1
1
thiazolo[3,2-a]pyrimidine
0.11 g, 1 mmol) in dry ethanol (10 mL), the appropriate alkyl halide
1.1 mmol) was added and the solution was heated under reflux for 5 h.
3
(0.24 g,
1
mmol) and Et N
The NMR spectra of all new compounds, as well as H– H
COSY and NOESY spectra of 4b, are available through:
stl.publisher.ingentaconnect.com/content/stl/jcr/supp-data
3
(
(