Hydrogen Atom Adducts to Nitrobenzene
J. Am. Chem. Soc., Vol. 122, No. 39, 2000 9513
+
cation C6H5 by dissociative ionization of nitrobenzene. Typical EI
calculation was small as judged from the S2 operator expectation
values that were 0.75-0.77. The optimized structures were characterized
by harmonic frequency analysis as local minima (all frequencies real)
or first-order saddle points (one imaginary frequency). Complete
optimized structures in the Cartesian coordinate format are available
as Supporting Information. The B3LYP/6-31+G(d,p) frequencies were
scaled by 0.963 (ref 28, for other scaling factors see ref 29) and used
to calculate zero-point vibrational energies (ZPVE), enthalpy correc-
tions, and partition functions. Single-point energies were calculated at
several levels of theory. In one set of calculations, MP2(frozen core)30
and B3LYP energies were calculated with the larger 6-311+G(2df,p)
basis set. Spin contamination in the UMP2 calculations was substantial
for the nitrobenzene radicals and transition states, as evidenced by the
spin expectation values S2 that ranged between 1.1 and 1.6. Spin
annihilation using Schlegel’s projection method31 (PMP2)26 reduced
the S2 values to 0.77-0.88 for local minima and 1.1-1.5 for transition
states. In addition, restricted open-shell (ROMP2) calculations32 were
carried out for the entire set of structures to deal with the spin
contamination problem.33 The PMP2 and ROMP2 energies were
averaged with the B3LYP energies according to the empirical procedure
that was introduced previously34 and tested for several systems since.35,36
This resulted in error cancellation and provided excellent relative
energies, denoted as B3-PMP2 or B3-ROMP2,36 as discussed below.
Calculations on closed-shell systems are marked by B3-MP2. In
addition, a composite procedure was adopted that consisted of a single-
point quadratic configuration interaction calculation,37 QCISD(T)/
6-31G(d,p), and basis set expansion up to 6-311+G(3df,2p) through
PMP2 or ROMP2 single-point calculations according to eq 1:
conditions were as follows: electron energy 70 eV, source temperature
280-300 °C, and sample pressure 5-8 × 10-6 Torr. Stable precursor
cations were passed through a quadrupole mass filter operated in the
radio frequency-only mode, accelerated to the total kinetic energy of
8250 eV and neutralized in the collision cell floated at -8170 V. The
precursor ion lifetimes were 30-40 µs. Dimethyl disulfide (DMDS)
was admitted to the differentially pumped collision cell at a pressure
such as to achieve 70% transmittance of the precursor ion beam. The
ions and neutrals were allowed to drift to a four segment conduit,23
where the ions were reflected by the first segment floated at +250 V.
The neutral flight times in standard NRMS measurements were 5.3
µs. The fast neutral species were reionized in the second collision cell
by collision with oxygen at a pressure adjusted such as to achieve 70%
transmittance of the precursor ion beam. The ions formed in the second
collision cell were decelerated, energy filtered, and analyzed by a
quadrupole mass filter operated at unit mass resolution. The instrument
was tuned daily to maximize the ion current of reionized CS2
+•
.
Typically, 40 repetitive scans were accumulated per spectrum, and each
spectrum was reproduced at least three times over a period of several
weeks. Variable-time measurements were carried out as described
previously.21 The neutral flight times that were used to evaluate the
unimolecular dissociation kinetics were 0.51, 1.50, and 2.50 µs.
Collisionally activated dissociation (CAD) spectra were measured
on a JEOL HX-110 double-focusing mass spectrometer of forward
geometry (the electrostatic sector E precedes the magnet B). Collisions
with air were monitored in the first field-free region at pressure to
achieve 70% transmittance of the ion beam at 10 keV. The spectra
were obtained by scanning E and B simultaneously while maintaining
a constant B/E ratio (B/E linked scan).
Materials. Methane (Matheson, 99.97%), CD4 (Cambridge Isotope
Laboratories, 99% D), methanol (Aldrich), CD3OD (Cambridge Isotope
Laboratories, 99% D), CD3CN (Cambridge Isotope Laboratories, 99%
D), dimethyl disulfide (DMDS, Aldrich), nitrobenzene (Aldrich, 99%)
and nitrobenzene-d5 (Aldrich, 99% D), and nitrosobenzene (Aldrich)
were used as received.
ortho-, meta-, and para-D-nitrobenzenes were synthesized from the
corresponding nitroanilines (Aldrich) by diazotation with 1.5 equiv of
NaNO2 in D2O/DCl at -5 °C followed by diazonium salt reduction
with a 5-fold molar excess of D3PO2 (Aldrich, 99% D) at 0 °C
overnight.24 The products were extracted in ether, the solutions were
decolorized with active charcoal, the solvent was distilled off, and the
products were purified by vacuum distillation. The overall yields of
distilled products were 50-70%. The product purity was verified by
gas-chromatography mass spectrometry that showed 99% D1 content
in the labeled nitrobenzenes. Minor impurities were nitrosobenzene
(<1%) and chloronitrobenzenes (<5%) that did not interfere in the
mass spectrometric measurements. Methyl nitrate was prepared ac-
cording to a literature procedure.25
QCISD(T)/6-311+G(3df,2p) ≈ QCISD(T)/6-31G(d,p) +
MP2/6-311+G(3df,2p) - MP2/6-31G(d,p) (1)
This level of theory is intermediate between those of the Gaussian
2 (MP2) method38 which uses the 6-311G(d,p) basis set in the large
QCISD(T) calculation and the G2(MP2, SVP) method39 which uses
the 6-31G(d) basis set instead. We also utilized the previous finding
that restricted open-shell calculations (ROMP2) provided good stabi-
lization energies for small organic radicals.33 A basis set expansion to
effective QCISD(T)/6-311+G(2df,p) was also tested for selected
systems. The calculated total energies are available as Supporting
Information. The relative energies are presented in Tables 1-7.
Franck-Condon energies in vertical neutralization and reionization
were taken as absolute differences between the total B3LYP/6-311+G-
(2df,p) energies of fully optimized ion or neutral structures and those
in which an electron has been added to an optimized cation structure
(27) (a) Becke, A. D. J. Chem. Phys. 1993, 98, 1372 and 5648. (b)
Stephens, P. J.; Devlin, F. J.; Chablowski, C. F.; Frisch, M. J. J. Phys.
Chem. 1994, 98, 11623.
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J. W.; Stephens, P. J. J. Mol. Struct. (THEOCHEM) 1995, 227, 357. (c)
Wong, M. W. Chem. Phys. Lett. 1996, 256, 391.
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AdV. Quantum Chem. 1980, 12, 189.
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Trans. 2, 1999, 2305.
(34) Turecek, F. J. Phys. Chem. A, 1998, 102, 4703.
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(b) Wolken, J. K.; Turecek, F. J. Phys. Chem. A, 1999, 103, 6268. (c)
Wolken, J. K.; Turecek, F. J. Am. Chem. Soc. 1999, 121, 6010. (d) Turecek,
F.; Carpenter, F. H. J. Chem. Soc., Perkin Trans. 2 1999, 2315. (e) Turecek,
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Calculations. Standard ab initio and density functional theory
calculations were performed using the Gaussian 98 suite of programs.26
Geometries were optimized using Becke’s hybrid functional (B3LYP)27
and the 6-31+G(d,p) basis set. Spin-unrestricted calculations (UB3LYP)
were used for open-shell systems. Spin contamination in the UB3LYP
(23) Turecek, F. Org. Mass Spectrom. 1992, 27, 1087.
(24) (a) Høg, J. H. J. Label. Comput. 1971, 7, 179. (b) Alexander, E.
R.; Burge, R. E. J. Am. Chem. Soc. 1950, 72, 3100. (c) Murray, A.; Williams,
D. L. Organic Syntheses with Isotopes; Wiley-Interscience: New York,
1958; pp 1375 and 1592.
(25) Black, A. P.; Babers, F. H. Org. Synth. 1939, 19, 64.
(26) Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb,
M. A.; Cheeseman, J. R.; Zakrzewski, V. G.; Montgomery, J. A., Jr.;
Stratmann, R. E.; Burant, J. C.; Dapprich, S.; Millam, J. M.; Daniels, A.
D.; Kudin, K. N.; Strain, M. C.; Farkas, O.; Tomasi, J.; Barone, V.; Cossi,
M.; Cammi, R.; Mennucci, B.; Pomelli, C.; Adamo, C.; Clifford, S.;
Ochterski, J.; Petersson, G. A.; Ayala, P. Y.; Cui, Q.; Morokuma, K.; Malick,
D. K.; Rabuck, A. D.; Raghavachari, K.; Foresman, J. B.; Cioslowski, J.;
Ortiz, J. V.; Stefanov, B. B.; Liu, G.; Liashenko, A.; Piskorz, P.; Komaromi,
I.; Gomperts, R.; Martin, R. L.; Fox, D. J.; Keith, T.; Al-Laham, M. A.;
Peng, C. Y.; Nanayakkara, A.; Gonzalez, C.; Challacombe, M.; Gill, P. M.
W.; Johnson, B. G.; Chen, W.; Wong, M. W.; Andres, J. L.; Head-Gordon,
M.; Replogle, E. S.; Pople, J. A. Gaussian 98, revision A.6; Gaussian,
Inc.: Pittsburgh, PA, 1998.