10.1002/cmdc.201900596
ChemMedChem
FULL PAPER
Rhod-Ada conjugate was synthesized in order to efficiently label the
nanoMOFs.
diethyl‐3H‐xanthen‐3‐iminium chloride (Rhod-Ada, 5). To a
mixture of rhodamine piperazine (120 mg, 0.22 mmol) and acid 3 (113 mg,
0.26 mmol) in DMF (3 mL) was sequentially added HOBt (10 mg, 0.07
mmol), EDCI (56 mg, 0.29 mmol) and Hünig’s base (148 mg, 1.15 mmol).
The reaction mixture was stirred at 20 °C for 24 h and concentrated under
reduce pressure. The residue was taken up into HCl 0.1 N (5 mL) and
extracted with CH2Cl2 (3 X 10 mL). The combined organic phases were
dried over MgSO4 and concentrated to leave a dark red oil which was
chromatographed over silica gel eluting with CH2Cl2/MeOH, 20:1 and then
10:1 to give the rhodamine adamantane conjugate 5 as a dark red solid
(79 mg, 47%). 1H NMR (300 MHz, CDCl3) δ 7.90-7.67 (m, 5H, 2 NH, H-
3’Rhod, H-5’Rhod, H-6’Rhod), 7.55-7.50 (m, 1H, H-4’Rhod), 7.29 (d, J = 9.3 Hz,
2H, H-1Rhod, H-8Rhod), 7.07 (dd, J = 9.3 Hz, J = 2.4 Hz, 2H, H-2Rhod, H-7Rhod),
6.97 (d, 1H, J = 2.4 Hz, 2H, H-4Rhod, H-5Rhod), 3.69 (q, J = 7.0 Hz, 8H,
N(CH2CH3)2), 3.60 (s, 4H, OCH2CH2O), 3.57-3.30 (m, 16H,
CH2CH2OCH2CH2OCH2CH2, CON(CH2CH2)2NCO), 2.65-2.55 (m, 2H,
CH2CON), 2.50-2.42 (m, 2H, CH2CON), 2.00-1.90 (m, 5H, CH2CON, H-
3Ada, H-5Ada, H-7Ada), 1.80-1.60 (m, 12H, H-2Ada, H-4Ada, H-6Ada, H-8Ada, H-
9Ada, H-10Ada), 1.31 (t, J = 7.0 Hz, 12H, N(CH2CH3)2) ppm; 13C NMR (75
MHz, CDCl3) δ 174.7 (C, CO), 173.9 (C, CO), 172.7 (C, CO), 169.6 (C,
CORhod), 159.3 (2C, C-3Rhod, C-6Rhod), 157.2 (2C, C-4aRhod, C-4bRhod),
157.0 (C, C-1’Rhod), 136.5 (CH, C-5’Rhod), 133.2 (2CH, C-1Rhod, C-8Rhod),
132.7 (C, C-9Rhod), 131.8 (CH, C-6’Rhod), 131.3 (C and CH, C-2’Rhod, C-
32’Rhod), 128.9 (CH, C-4’Rhod), 115.4 (2CH, C-2Rhod, C-7Rhod), 114.8 (2C, C-
8aRhod, C-8bRhod), 97.3 (2CH, C-4Rhod, C-5Rhod), 71.3 (CH2, CH2O), 71.2
(CH2, CH2O), 70.7 (CH2, CH2O), 70.6 (CH2, CH2O), 51.8 (CH2,
AdaCH2CON), 46.9 (4CH2, N(CH2CH3)2), 43.7 (3CH2, C-2Ada, C-8Ada, C-
9Ada), 43.2-42.6 (m, 4CH2, N(CH2CH2)2N), 40.3 (CH2, CH2NCO), 40.1 (CH2,
CONCH2), 37.9 (3CH2, C-4Ada, C-6Ada, C-10Ada), 33.8 (C, C-1Ada), 31.5
(CH2, NCOCH2CH2CON), 30.2 (3CH, C-3Ada, C-5Ada, C-7Ada), 29.0 (CH2,
NCOCH2CH2CON), 12.8 (4CH3, N(CH2CH3)2) ppm; MS (ESI+): m/z (%) =
General
IR spectra were obtained as solid or neat liquid on a Fourier Transform
Bruker Vector 22 spectrometer. Only significant absorptions are listed. The
1H and 13C NMR spectra were recorded on Bruker Avance 300 (300 MHz
and 75 MHz, for 1H and 13C, respectively) or Bruker Avance 400 (400 MHz
and 100 MHz, for 1H and 13C, respectively) spectrometers. Recognition of
methyl, methylene, methine, and quaternary carbon nuclei in 13C NMR
spectra rests on the J-modulated spin-echo sequence. Mass spectra were
recorded on a Bruker Esquire-LC. Analytical thin-layer chromatography
was performed on Merck silica gel 60F254 glass precoated plates (0.25
mm layer). Column chromatography was performed on Merck silica gel 60
(230-400 mesh ASTM). These methods were used for all the following
compounds.
Synthesis
of
2‐(Adamantan‐1‐yl)‐N‐{2‐[2‐(2‐
solution of 1-
aminoethoxy)ethoxy]ethyl}acetamide (2). To
a
adamantane acetic acid (280 mg, 1.44 mM) in CH2Cl2 (3 mL) was added
a drop of DMF and oxalyl chloride (202 mg, 1.58 mmol). The reaction
mixture was stirred 2 h at 20 °C and then concentrated in vacuo. The
residue was taken up into CH2Cl2 (10 mL) and slowly added over three
hours to 2,2’(ethylendioxy)bis(ethylamine) (2.13 g, 14.4 mmol) in CH2Cl2
(20 mL). The reaction mixture was stirred at room temperature for 12 h and
concentrated under reduced pressure. The residue was treated with 0.5 N
NaOH (10 mL) and extracted with Et2O (2 5 mL). The organic layer was
discarded, and the aqueous phase was extracted with CH2Cl2 (5 10 mL).
The combined organic phases were dried over MgSO4 and concentrated
to leave a pale yellow oil which used directly in the next step (262 mg,
56%).
917.6 (100) [M-Cl]+, 553.3 (15), 539.3 (14), 470 (80) [M-Cl+Na]2+
.
NanoMOFs labeling with Rhod-Ada
IR (neat, cm-1) n 3330 (br), 2929, 2899, 2846, 1640, 1510, 1480, 1347,
1336, 1315, 1293, 1275, 1243, 1203, 1156, 1139, 1103, 1096, 989, 925,
906, 883, 725; 1H NMR (300 MHz, CDCl3) δ 6.10 (br s, 1H, CONH), 3.58
(s, 4H, OCH2CH2O), 3.55-3.45 (m, 4H, CH2OCH2CH2OCH2), 3.45-3.35 (m,
2H, HNCH2CH2O), 2.87 (br s, 2H), 2.19 (br s, 2H, NH2), 1.95-1.88 (m, 5H,
CH2CON, H-3, H-5, H-7), 1.75-1.60 (m, 12H, H-2, H-4, H-6, H-8, H-9, H-
10) ppm; 13C NMR (75 MHz, CDCl3) δ 171.1 (C, CON), 73.3 (CH2, CH2O),
70.3 (CH2, CH2O), 70.2 (CH2, CH2O), 70.1 (CH2, CH2O), 51.7 (CH2,
AdaCH2CON), 42.7 (3CH2, C-2, C-8, C-9), 41.8 (CH2, CH2N), 39.1 (CH2,
CONCH2), 36.9 (3CH2, C-4, C-6, C-10), 32.8 (C, C-1), 28.7 (3CH, C-3, C-
5, C-7) ppm; MS (ESI+): m/z (%) = 325.3 (100) [M-].
Rhod-Ada was dissolved in water at a concentration of 1mM and incubated
overnight with nanoMOFs at a weight ratio of 1:10 (Rhod-Ad: nanoMOFs).
Rhod-Ad labelled nanoMOFs were washed with water until no free Rhod-
Ad was found in the washing solution (concentration <0.05 µg/mL).
Because of quenching effect of nanoMOFs, Rhod adsorption on the
surface of nanoMOFs could not be directly quantified. Indirect methods
were applied consisting in quantifying the initial Rhod amount added to
nanoMOFs and the free Rhod in the supernatants after extensive
washings of the nanoMOFs using a fluorescence spectrophotometer
(VARIAN, Cary Eclipse). Rhod-Ad adsorption was calculated as the
weight ratio (%) between the adsorbed Rhod-Ad and the nanoMOFs.
Rhod-Ad release was measured in cell culture medium. After incubation at
37°C for 1, 2, 4, and 6 h, the samples were collected by centrifugation and
the detached Rhod-Ad was measured using a fluorimeter. Rhod labelling
was performed in the same way as control samples.
3‐{[2‐(2‐{2‐[2‐(Adamantan‐1‐
yl)acetamido]ethoxy}ethoxy)ethyl]carbamoyl}propanoic acid (3)
synthesis. A mixture of amine 2 (124 mg, 0.38 mmol) and succinic
anhydride (50 mg, 0.51 mmol) in THF (3 mL) was heated at 40 °C for 16
h. The mixture was concentrated in vaccuo and the residue was
chromatographed on silica gel eluting with CH2Cl2/MeOH, 20:1 to leave
the acid 3 as a colorless oil (113 mg, 70%). IR (neat, cm-1) n 3300 (br),
3080 (br), 2930, 2901, 2846, 1720, 1645, 1619, 1540, 1454, 1347, 1335,
1242, 1203, 1173, 1157, 1140, 1103, 1095, 1078, 1045, 990, 882; 1H NMR
(300 MHz, MeOH-d4) δ 3.61 (s, 4H, OCH2CH2O), 3.54 (t, J = 5.4 Hz, 4H,
CH2OCH2CH2OCH2), 3.36 (t, J = 5.4 Hz, 4H, CONHCH2CH2O), 2.61-2.55
(m, 2H, CH2CO2H), 2.51-2.45 (m, 2H, NCOCH2), 1.95 (s, 5H, CH2CON, H-
Visualization by confocal microscopy. 3.0×104 HeLa cells were seed
on sterile glass slides. After incubating overnight for the cells to get
attached, nanoMOFs labelled with Rhod or Rhod-Ad were incubated with
living cells for 6 h. After washing three times with PBS to remove free
nanoMOFs, living cells were visualized using
a
LEICA SP5
confocal system, equipped with a thermostatically controlled and CO2
regulated chamber (University Paris Sud, France). Rhod and Rhod-Ad
were excited at 514 nm and the emission from 560-600 nm were collected.
The images were processed with the Image J software.
3, H-5, H-7), 1.80-1.60 (m, 12H, H-2, H-4, H-6, H-8, H-9, H-10) ppm; 13
C
NMR (75 MHz, MeOH-d4) δ 176.0 (C, CO2H), 174.5 (C, CON), 173.8 (C,
CON), 71.3 (CH2, CH2O), 71.2 (CH2, CH2O), 70.6 (CH2, CH2O), 70.5 (CH2,
CH2O), 51.8 (CH2, AdaCH2CON), 43.7 (3CH2, C-2, C-8, C-9), 40.3 (CH2,
CH2NCO), 40.1 (CH2, CONCH2), 37.9 (3CH2, C-4, C-6, C-10), 33.7 (C, C-
1), 31.5 (CH2, CH2CH2CO2H), 30.3 (CH2, CH2CH2CO2H), 30.17 (3CH, C-
3, C-5, C-7) ppm; MS (ESI-): m/z (%) = 423.3 (100) [M-].
Fe quantification was performed by adjusting a previous reported iron
staining protocol.[25] Briefly, 2.0×105 cells were plated in 24 wells plates
and incubated for 24 h for cell adherence. Then the cells were incubated
for 6 h with 1 mL of DMEM 10 % FBS or 1 mL of culture media containing
nanoMOFs labelled or not with Rhod-Ad (nanoMOF concentration = 0~200
µg/mL). Cells were prepared in four wells for each condition. At the end of
the incubation, the cells were washed three times with PBS to eliminate
9 ‐ {2 ‐ [4 ‐ (3 ‐ {[2 ‐ (2 ‐ {2 ‐ [2 ‐ (adamantan ‐ 1 ‐
yl)acetamido]ethoxy}ethoxy)ethyl]
carbamoyl}
propanoyl)
piperazine ‐ 1 ‐ carbonyl]phenyl} ‐ 6 ‐ (diethylamino) ‐ N,N ‐
7
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