T. Furuya et al. / Journal of Molecular Catalysis B: Enzymatic 94 (2013) 111–118
113
Table 2
◦
and pACYCDpdR-gdh were cultivated at 30 C in LB medium
supplemented with ampicillin (100 g/ml) and chlorampheni-
col (100 g/ml). After cultivation for 6 h (OD600 = 0.8–1.0),
isopropyl--d-thiogalactopyranoside (1 mM), 5-aminolevulinic
acid (0.5 mM), and FeSO4 (0.5 mM) were added to the medium, and
Oligonucleotide primers used in this study.
ꢀ
ꢀ a
Primer
Sequence (5 –3 )
Restriction
site
pdx-F
pdx-R
P450cam-F
P450cam-R
pdR-F
pdR-R
gdh-F
gdh-R
TTC CAT ATG TCT AAA GTA GTG TAT GTG TCA
GA AGA TCT TTA CCA TTG CCT ATC GGG AAC
TTC TCA TGA CGA CTG AAA CCA TAC AAA GCA
CCG GAA TTC TTA TAC CGC TTT GGT AGT CGC
TTC TCA TGA ACG CAA ACG ACA ACG TGG TCA
CGC GGA TCC TCA GGC ACT ACT CAG TTC AGC
TTC CAT ATG TAT CCG GAT TTA AAA GGA AAA
GA AGA TCT TTA ACC GCG GCC TGC CTG GAA
NdeI
BglII
◦
cultivation was continued for an additional 15 h at 25 C. Cells were
BspHI
EcoRI
BspHI
BamHI
NdeI
harvested by centrifugation and washed with potassium phosphate
buffer (200 mM, pH 7.5) containing glycerol (10%, v/v). These cells
were used as wet cells. After treatment with lyophilizer (FDU-1000,
EYELA, Tokyo, Japan), the resulting cells were used as freeze-dried
cells.
BglII
a
Restriction sites are underlined and identified in the column on the right. Initi-
ation and termination codons are indicated in bold.
2.4. Protein and P450 analyses
(
Table 1). Two oligonucleotide primers, pdx-F and pdx-R (Table 2),
When cell-free extracts were prepared, cells were suspended in
potassium phosphate buffer (50 mM, pH 7.5) containing glycerol
(10%, v/v) and were disrupted by sonication. After centrifugation
at 15,000 × g for 30 min at 4 C, the resulting supernatant was used
were designed to amplify the pdx gene (GenBank accession num-
ber, P00259). The region between the two oligonucleotide primers
was amplified from the pET21a vector carrying the pdx gene [33] by
PCR. PCR was performed with KOD Plus polymerase (Toyobo, Osaka,
Japan) under the buffer conditions recommended by the manu-
facturer. The PCR mixture was heated at 94 C for 2 min and then
subjected to 30 cycles of amplification (94 C for 15 s; 55 C for 30 s;
and 68 C for 30 s). This amplified DNA fragment was digested with
NdeI and BglII, and then inserted into the multi-cloning site (MCS)-2
of the pETDuet-1 vector that was digested with the same restric-
tion enzymes. The resulting plasmid, pETDpdx, was amplified in
E. coli JM109 cells. Next, two oligonucleotide primers, P450cam-F
and P450cam-R (Table 2), were designed to amplify the P450cam
gene (GenBank accession number, P00183). The region between
the two oligonucleotide primers was amplified from genomic DNA
of Pseudomonas putida JCM 6157 (ATCC 17453) by PCR. The PCR
◦
as the cell-free extract. The cell-free extracts were used to ana-
lyze protein levels and P450 expression. Protein concentration was
measured using a Coomassie protein assay kit (Pierce, Rockford, IL,
USA) with a bovine serum albumin standard [34]. The expression
levels of P450cam, Pdx, PdR, and Gdh were examined by sodium
dodecyl sulfate-polyacrylamide gel electrophoretic (SDS-PAGE)
analysis. Active P450cam was quantified based on the reduced CO
difference spectrum characteristic of thiolate-heme enzymes using
◦
◦
◦
◦
−
1
−1
an extinction coefficient of 91 mM cm at 450 nm [35]. Before
analysis of these spectra, the protein concentration of the cell-free
extracts was adjusted to 2 g/l.
2.5. Reactions using whole cells
◦
mixture was subjected to 30 cycles of amplification (94 C for 15 s;
◦
◦
6
5 C for 30 s; and 68 C for 90 s). This amplified DNA fragment
was digested with BspHI and EcoRI, and then inserted into MCS-
of the pETDpdx plasmid that was digested with NcoI and EcoRI.
The reaction mixture (50 ml) contained cells of the transformed
E. coli strain (15 g dry cell weight (DCW)/l), 2-adamantanone
(20 mM), dimethylsulfoxide (DMSO) (10%, v/v), and potassium
phosphate buffer (200 mM, pH 7.5) containing glycerol (10%, v/v).
The reaction mixture was supplemented with glucose (50 mM)
when required. Fifteen grams of DCW corresponded to 50 g of wet
1
The resulting plasmid, pETDP450cam-pdx, was amplified in E. coli
JM109 cells.
The plasmids used for expression of the pdR and gdh genes
in E. coli cells were constructed using the pACYCDuet-1 vector
◦
cell weight. The reactions were performed at 30 C with rotary
(Table 1). Two oligonucleotide primers, pdR-F and pdR-R (Table 2),
shaking at a speed of 120 rpm.
were designed to amplify the pdR gene (GenBank accession num-
ber, P16640). The region between the two oligonucleotide primers
was amplified from the pET21a vector carrying the pdR gene [33]
by PCR. The PCR mixture was subjected to 30 cycles of amplification
2.6. Production of 5-hydroxy-2-adamantanone with repeated
additions of the substrate
◦
◦
◦
(
94 C for 15 s; 60 C for 30 s; and 68 C for 90 s). This amplified DNA
The reaction was performed in a 500-ml flask that con-
tained cells of the transformed E. coli strain (15 g DCW/l),
2-adamantanone (20 mM), glucose (50 mM), and potassium phos-
phate buffer (200 mM, pH 7.5) containing glycerol (10%, v/v) in a
volume of 50 ml. After 4-h incubation, 2-adamantanone (20 mM)
and glucose (50 mM) were again added to the reaction mixture.
fragment was digested with BspHI and BamHI, and then inserted
into MCS-1 of the pACYCDuet-1 vector that was digested with NcoI
and BamHI. The resulting plasmid, pACYCDpdR, was amplified in E.
coli JM109 cells. Next, two oligonucleotide primers, gdh-F and gdh-
R (Table 2), were designed to amplify the gdh gene (GenBank acces-
sion number, NP 388275). The region between the two oligonu-
cleotide primers was amplified from genomic DNA of Bacillus
subtilis strain 168 (ATCC 23857) by PCR. The PCR mixture was sub-
◦
The reactions were carried out at 30 C with rotary shaking at a
speed of 120 rpm.
◦
◦
jected to 30 cycles of amplification (94 C for 15 s; 60 C for 30 s; and
6
2.7. Product analysis and glucose measurement
◦
8 C for 60 s). This amplified DNA fragment was digested with NdeI
and BglII, and then inserted into MCS-2 of the pACYCDpdR plasmid
that was digested with the same restriction enzymes. The resulting
plasmid, pACYCDpdR-gdh, was amplified in E. coli JM109 cells.
After the plasmid constructs were confirmed by sequencing,
these plasmids were introduced into E. coli BL21 (DE3) cells by
electroporation.
Gas chromatography (GC) analysis was performed using a GC-
2010 system (Shimadzu, Kyoto, Japan) equipped with a flame
ionization detector and a 30-m type DB-5 column (J&W Scientific,
Folsom, CA, USA). A portion of the reaction mixture was acidi-
fied by the addition of HCl (pH 2–3) and was extracted with ethyl
acetate. The resulting extract was injected into the GC system.
The carrier gas was helium and the flow rate was 1.0 ml/min. The
◦
2.3. Preparation of whole cells
injection temperature was maintained at 250 C. The oven tem-
◦
perature was programmed as follows: start temperature of 120 C,
◦
◦
The transformed E. coli BL21 (DE3) cells carrying pETDP450cam-
pdx and pACYCDpdR, and the cells carrying pETDP450cam-pdx
increased to 165 C at a rate of 15 C/min, further increased to
◦ ◦
180 C at a rate of 5 C/min, and held for 4 min at finish temperature