10.1002/chem.201802846
Chemistry - A European Journal
FULL PAPER
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Conclusions
In conclusion, here we have introduced the Pd(EDTA)(OAc)2
catalysed cross coupling reaction as
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a method for the
modification of the non-canonical amino acid dehydroalanine in
proteins and peptides. While no full conversion was achieved for
nisin, it has to be emphasized that such a late stage modification
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the Heck product the sp2-hybridisation of the α-carbon in the
Heck product is maintained, thus leaving the geometry of the
backbone of the biomolecules intact, which may be of particular
importance for natural Dha/Dhb containing compounds.
Although an excess of the catalyst is necessary to obtain high
conversions, purification by precipitation of the palladium
catalyst with methylthioglycolate or pyrrolidine dithiocarbamate
as novel scavengers removes up to 98-99% of the catalyst. The
unique product of the reaction on Dha, combined with the fact
that the reactions can be performed under mild, aqueous and pH
neutral conditions at 37 oC, makes this method an attractive
addition to the palette bio-orthogonal catalytic methods.
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Experimental Section
General procedure of catalysis on Nisin
Catalysis was performed in 50 mM NaH2PO4 buffer pH 7 or pH 8 with a
final concentration of 40 μM peptide, 2 mM boronic acid and 2 mM
catalyst. A typical catalysis reaction was set up as follows: Nisin (2 nmol
in 30 μL buffer) and 10 μL of 10 mM boronic acid stock solution were
combined. 10 μL of 10 mM catalyst stock solution was added. The vial
was shaken for 16 hours at room temperature. 5 μL of 250 mM
methylthioglycolate stock solution was added to scavenge the palladium,
the reaction mixture turned yellow instantly. The reaction mixture was
shaken at 37 oC for an additional hour. The precipitate was removed by
centrifugation for 10 minutes at 13.4k rpm. The supernatant was
analysed by UPLC/MS TQD and purified by rp-HPLC.
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Acknowledgements
The authors thank Prof. Dr. Adri Minnaard and Prof. dr. Frank
Dekker for advice on palladium catalysis, Prof. Dr. Oscar
Kuipers and Dr. Manuel Montalbán López for useful discussion
and for providing the initial batches of nisin. Financial support
from the Netherlands Ministry of Education, Culture, and
Science (Gravitation program no. 024.001.035) and the
Netherlands Organisation for Scientific Research (NWO, vici
grant 724.013.003) is gratefully acknowledged.
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Keywords: bio-orthogonal catalysis • dehydroalanine •
palladium • nisin • cross coupling
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