A R T I C L E S
Pratt et al.
Scheme 2. Reversible Oxygen Addition to Pentadienyl Radicals
RSE(Y) ) BDE(Y-CH2-H) - BDE(CH3-H) (1)
As has been noted previously,8 all methods agree well on this
simplest case.
Although the DFT models perform well for the most part,
there are some noteworthy exceptions. It has been reported
elsewhere that DFT underestimates X-H BDEs (X ) O, N)
for compounds with increasingly weak bonds (i.e., the deviation
in calculated BDEs from experimental data is larger the more
stable the incipient radical).14-17 It would appear that DFT also
underestimates C-H BDEs for compounds with increasingly
weak bonds as shown in Table 1 (cf. methane through to 1,4-
pentadiene). Improving the quality of the model improves the
agreement with experiment, especially for 1,4-pentadiene, but
the HLM result of 74.2 kcal/mol is still 2.2 kcal/mol lower than
the experimental value of 76.4 kcal/mol. Increasing the basis
set size to 6-311++G(3df,3pd) does not improve the agreement
(74.1 kcal/mol), suggesting that the basis set limit has already
been reached at 6-311+G(2d,2p). Moreover, using a large
correlation consistent basis set does not improve the result (74.4
by ROB3LYP/AUG-cc-pVTZ). The G3 compound method
predicts 75.6 kcal/mol, also low compared to experiment but
only by 0.8 kcal/mol. With only five heavy atoms in 1,4-
pentadiene, we were able to push the limits of theory and
perform a CBS-APNO18 calculation of the C-H BDE. CBS-
APNO finds 75.3 kcal/mol, only 1.1 kcal/mol higher than the
HLM result of 74.2 kcal/mol and in good agreement with the
G3 result.19
hydrogen atom transfer from ArOH to, and â-fragmentation of,
intermediate peroxyls as well as on the partitioning of oxygen
to the reactive sites on the delocalized radical intermediates.
Given the fundamental importance of the reactions of
delocalized carbon radicals such as 7 and 8 and the peroxyl
radicals formed from these species by oxygen addition to the
understanding of peroxidation mechanisms, we set out to
examine the important reactions of these radicals by theory.
Specifically, we seek answers to the following questions: (1)
What is the relative ease with which a hydrogen atom can be
removed from an unsaturated lipid? One anticipates that the
rate constants for hydrogen atom transfer should be related to
the bond dissociation enthalpy (BDE) of the relevant C-H bond.
A peroxyl radical is the partner in this reaction and peroxyl
radicals have O-H BDEs that are relatively independent of
structure,7 leaving the C-H BDE uniquely relevant to the rate
of the H atom transfer. (2) Where does the unpaired electron
spin density reside in the delocalized intermediate carbon-
centered radical, and does oxygen add preferentially to carbon
centers having more spin density? (3) Finally, following the
addition of oxygen to these radicals, how stable are the resulting
lipid peroxyl radicals toward â-fragmentation? Given the fact
that these reactions are endothermic and the reverse reaction,
oxygen addition, occurs without a substantial barrier, we believe
the rate constants for â-fragmentation should be uniquely
dependent on the C-OO• BDE. To provides answers to these
questions of interest, we report here a computational study to
determine the C-H BDEs in lipids of interest, the spin density
distributions in the incipient radicals formed from those lipids,
and the C-OO• BDEs in the lipid peroxyl radicals derived
therefrom, respectively.
While all methods give values within the error of the
experimentally determined C-H BDE of propene, G3 and
G3MP2 give values for the C-H BDE in toluene that are 2.6
and 4.6 kcal/mol, respectively, larger than experiment (88.5 (
1.5 kcal/mol). Even the DFT models give a C-H BDE 0.8-
2.1 kcal/mol higher than experiment. Indeed, while experiment
suggests that RSE(benzyl) < RSE(allyl) by only a couple tenths
(9) Curtiss, L. A.; Raghavachari, K.; Redfern, P. C.; Rassolov, V.; Pople, J.
A. J. Chem. Phys. 1998, 109, 7764.
(10) Curtiss, L. A.; Redfern, P. C.; Raghavachari, K.; Rassolov, V.; Pople, J.
A. J. Chem. Phys. 1999, 110, 4703-4709.
(11) Berkowitz, J.; Ellison, G. B.; Gutman, D. J. Phys. Chem. 1994, 98, 2744-
2765.
(12) Trenwith, A. B. J. Chem. Soc., Faraday Trans. 1 1982, 78, 3131-3136.
This C-H BDE, also measured by Clark et al. reference (Clark, K. B.;
Culshaw, P. N.; Griller, D.; Lossing, F. P.; Martinho Simoes, J. A.; Walton,
J. J. Org. Chem. 1991, 56, 5535-5539.) by photoacoustic calorimetry, was
found to be 77 kcal/mol. However, upon revision of this value to 82 kcal/
mol to correct for solvation (Laarhoven, L. J. J.; Mulder, P.; Wayner, D.
D. M. Acc. Chem. Res. 1999, 32, 342-349), the authors admit that addition
of t-BuO• to the double bond takes place under the experimental conditions,
and the two processes cannot be deconvoluted, leading to an artificially
high C-H BDE. Hence, we consider the older gas phase thermolysis value
obtained by Trenwith to be most reliable.
Results and Discussion
Choice of Methodology. To calculate the C-H BDEs in the
lipids of interest, we required a methodology that would
successfully reproduce available experimental data but also be
computationally tractable on the larger models of polyunsatu-
rated systems and of their corresponding peroxyl radicals.
Because of our past successes using model density functional
theory (DFT) calculations employing the B3LYP density
functional to predict X-H BDEs,8 we applied these models to
a short series of unsaturated hydrocarbons. The results are shown
in Table 1. Results obtained by the high accuracy compound
G39 and G3MP210 methods as well as some experimental data
are presented alongside for comparison.
(13) Pedley, J. B.; Naylor, R. D.; Kirby, S. P. Thermochemical Data of Organic
Compounds, 2nd ed.; Chapman and Hall: London, 1986.
(14) Pratt, D. A.; de Heer, M. I.; Mulder, P.; Ingold, K. U. J. Am. Chem. Soc.
2001, 123, 5518-5526.
(15) Pratt, D. A.; DiLabio, G. A.; Brigati, G.; Pedulli, G. F.; Valgimigli, L. J.
Am. Chem. Soc. 2001, 123, 4625-4626.
(16) Pratt, D. A.; DiLabio, G. A.; Valgimigli, L.; Pedulli, G. F.; Ingold, K. U.
J. Am. Chem. Soc. 2002, 124, 11085-11092.
(17) Wright, J. S.; Johnson, E. R.; DiLabio, G. A. J. Am. Chem. Soc. 2001,
123, 1173-1183.
(18) Montgomery, J. A., Jr.; Ochterski, J. W.; Petersson, G. A. J. Chem. Phys.
1994, 101, 5900. Ochterski, J. W.; Petersson, G. A.; Montgomery, J. A.,
Jr. J. Chem. Phys. 1996, 104, 2598.
We have included methane in the series to determine the
radical stabilization enthalpies (RSEs) of the substituents:
(19) It should be pointed out that the B3LYP-HLM C-H BDE for 1,3-pentadiene
is in good agreement with the experimental, G3, and G3MP2 values despite
the fact that the pentadienyl radical formed upon C-H homolysis is the
same as that for 1,4-pentadiene. This suggests that the observation that
DFT underestimates X-H BDEs (X ) O, N) for compounds with
increasingly weak bonds is not because of a problem with how the open
shell radical is handled but instead the closed-shell precursor.
(7) Luo, Y.-R. Handbook of Bond Dissociation Energies in Organic Com-
pounds; CRC Press: Boca Raton, FL, 2003; pp 166-170. Virtually all
ROO-H BDEs are roughly 88 kcal/mol.
(8) DiLabio, G. A.; Pratt, D. A.; LoFaro, A. D.; Wright, J. S. J. Phys. Chem.
A 1999, 103, 1653-1661.
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5802 J. AM. CHEM. SOC. VOL. 125, NO. 19, 2003