Products of Ledakrin Metabolic Activation
Chem. Res. Toxicol., Vol. 14, No. 1, 2001
3
formate at a flow rate of 1 mL/min using a 5 µm Suplex pKb
column with water and methanol as the mobile phase. The
samples were lyophilized and redissolved in DMSO for NMR
analysis.
Red u ction of Led a k r in by Hyd r a zin e Hyd r a te. Ledakrin
(1 mM) was dissolved in 25 mL of THF, and 50 mg of Pd/C (10%
v/w) was added. The reaction mixture was placed in the ice bath
and bubbled with argon for 5 min. Two hundred microliters of
the hydrazine hydrate solution was added in small portions of
1
00 analytical column (0.46 cm × 25 cm) (Supelco, Bellefonte,
PA).
The products for NMR analysis were isolated by means of
low-pressure liquid chromatography using a reversed stationary-
phase C18 from Merck (Darmstadt, Switzerland).
LC/MS analysis of the products was accomplished by elec-
trospray ionization with positive ion detection performed on a
Finnigan MAT TSQ 700 tandem mass spectrometer equipped
with a Finnigan electrospray ionization source interfaced with
5
0 µL every 2 min. The reaction was monitored spectrophoto-
metrically, and the products were separated and analyzed by
HPLC and off-line mass spectrometry. One of the products (6)
was isolated by means of low-pressure liquid chromatography
and analyzed by NMR.
2
the HPLC system and a Dionex GP40 gradient pump. N was
used as the sheath gas (386 kPa/56 psi). The HPLC apparatus
was a Waters Associates System model 600-MS with a 484-MS
tuneable absorbance detector operated at 254 nm.
Red u ction of Led a k r in by Sn Cl
2 2 4
. SnCl (1.75 g) and FeSO
(0.35 g) were dissolved in 20 mL of concentrated HCl. The
1H NMR measurements with COSY and ROESY techniques,
temperature was raised to 70 °C, and 0.5 g of ledakrin (dissolved
in concentrated HCl) was added after 15 min. The high reaction
temperature was maintained for 30 min and then slowly reduced
to -10 °C. The pellet was dissolved in water and alkalized with
NaOH. The pellet was extracted with ether, and the extract was
1
3
C NMR measurements with HSQC and HMBC techniques,
1
5
and N NMR measurements were carried out at 500.13 MHz
in deuterated dimethyl sulfoxide (DMSO-d ) using a Varian 500
spectrometer. Chemical shifts are reported in parts per million
6
1
3 4
for H relative to the internal standard (CH ) Si.
2 5
dried over P O . Recrystallization was performed on the solution
Activa tion of Led a k r in w ith th e Micr osom a l F r a ction
of Ra t Liver . Six-week-old male rats (Wistar) were injected
with 3-methylcholanthrene (4 mg/animal) for 3 days before
decapitation. Livers were removed, homogenized in a Potter-
Elvehjem homogenizer, and centrifuged for 30 min at 10000g.
The supernatant was mixed 1:1 with 20 mM sodium pyrophos-
phate. Polyethylene glycol (50%) was added to obtain a concen-
tration of 5% (w/v) and mixed for 10 min. The mixture was then
centrifuged for 10 min at 10000g. The resulting pellet was then
placed in a homogenizer with a solution of 0.1 M Tris acetate,
of methanol and ether, and the product was subjected to NMR
analysis. Product 7 was identified with a combination of UV/
vis spectra, NMR spectra (including COSY, ROESY, HSQC,
HMBC, and N), and electrospray ionization MS/MS.
Sp ectr a l Ch a r a cter iza tion of th e Rea ction P r od u cts. (1)
15
1
1
2
7
1
-Am in o-9-a cr id in on e (2): H NMR (in DMSO) δ 6.25 (d, 1H,
-H), 6.45 (d, 1H, 4-H), 7.18 (m, 1H, 7-H), 7.28 (m, 1H, 3-H),
.4 (d, 1H, 5-H), 7.6 (m, 1H, 6-H), 8.17 (d, 1H, 8-H), 11.27 (s,
H, 10-NH); UV (in MeOH) λmax 245, 260, 320, 420 nm; MS [M
O m/z 211 (found).
2) N -[3′-(Dim et h yla m in o)p r op yl]-4-(1′′,4′′-d isu lfa n yl-
+
+
H] for C13
H
10
N
2
1
mM EDTA, and 20% glycerine (pH 7.4) and homogenized. All
2
(
of the operations were carried out between 0 and 4 °C. Protein
concentrations were determined by the Lowry method.
-
2′′,3′′-d i h y d r o x y b u t a n e )-1,9-d i a z a n e -1,10-d i h y d r o -
1
a cr id in e (3): H NMR (in DMSO) δ 2.04 (m, 2H, 2′-H), 2.24 (d,
H, 4′-CH ), 2.42 (m, 2H, 3′-H), 2.54 (m, 2H, 4′′-H), 2.64 (dd, J
5.3 Hz, 1H, 1′′-H), 2.83 (dd, J ) 5.3 Hz, 1H, 1′′-H), 3.61 (m,
H, 2′′-H), 3.63 (m, 1H, 3′′-H), 4.6 (m, J ) 6.8 Hz, 2H, 1′-H), 6.5
d, J ) 8.7 Hz, 1H, 2-H), 7.04 (m, 1H, 3-H), 7.06 (m, J ) 7.3 Hz,
The activation of ledakrin with the microsomal fraction of
rat liver was carried out in 0.16 M Trizma base buffer (pH 7.4).
The incubation mixture consisted of 125 mM nicotinamide, 100
mM glucose 6-phosphate, 10 mM NADPH, glucose-6-phosphate
dehydrogenase (40 units), rat liver microsomes (5 mg/mL), and
ledakrin (1 mmol). The incubation was carried out at 37 °C in
air. RgThe reaction was initiated by addition of the compound
from the initial incubation after 5 min. After appropriate periods
of time, the incubation mixture was centrifuged for 5 min at
6
)
1
(
1
1
3
H, 7-H), 7.32 (m, J ) 5.8 Hz, 1H, 6-H), 7.54 (d, J ) 8.3 Hz,
13
H, 5-H), 7.8 (d, J ) 7.3 Hz, 1H, 8-H), 9.85 (s, 1H, 10-NH);
C
NMR δ 26.0 (4′′-C), 26.8 (2′-C), 39.0 (1′′-C), 44.8 (4′-C), 48.7 (1′-
C), 54.0 (3′-C), 70.0 (3′′-C), 72.5 (2′′-C), 93.0 (4-C), 103.0 (2-C),
1
1
14.0 (12-C), 117.0 (5-C), 118.5 (13-C), 121.0 (7-C), 122.5 (8-C),
1
2000g. The supernatant was analyzed directly by means of
15
29.0 (6-C), 131 (9-C), 137.5 (3-C), 140.0 (1-C), 141.0 (11-C);
N
HPLC/UV/Vis, HPLC/MS, and MS/MS. The pellet was extracted
with chloroform, dried, then dissolved in water and methanol
NMR δ -354.7 (4′-N), -272.5 (10-N), -175 (9-N), -95.5 (1-N);
UV [in a 60:40 ammonium formate (pH 3.5)/MeOH mixture] λmax
(1:1), and analyzed by HPLC and MS.
+
2
30, 260, 295, 305, 405 nm; MS [M + H] for C22
H
28
N
4
O
2
S
2
m/z
Activa tion of Led a k r in w ith DT-Dia p h or a se. Activation
444 (found), fragment ions at m/z 400 and 372.
of ledakrin (1 mM) with DT-diaphorase (500 µg/mL) in the
presence of 5 mM NADPH was carried out in 0.16 M Trizma
base buffer (pH 7.4) at 37 °C in air. The reaction was initiated
by the addition of ledakrin. The products were separated by
means of HPLC (elution system A) and analyzed by mass
spectrometry.
2
(
3) N -[3′-(Dim eth yla m in o)p r op yl]-2-(1′′,4′′-d isu lfa n yl-
2
′′,3′′-d ih yd r oxyb u t a n e )-1,9-d ia za n e -1,10-d ih yd r oa cr i-
1
d in e (4): H NMR (in DMSO) δ 2.04 (m, 2H, 2a′-H), 2.24 (d,
6
1
1
3
H, 4a′-CH ), 2.42 (m, 2H, 3a′-H), 2.5 (m, 2H, 4a′′-H), 2.89 (dd,
H, 1a′′-H), 3.0 (dd, aH, 1a′′-H), 3.60 (m, 1H, 2a′′-H), 3.60 (m,
H, 3a′′-H), 4.60 (m, 2H, 1a′-H), 5.79 (d, J ) 7.3 Hz, 1H, 4a-H),
Activa tion of Led a k r in w ith Xa n th in e Oxid a se. Activa-
tion of ledakrin (1 mM) by xanthine oxidase (5.3 mg/mL) in the
presence of xanthine (0.3 mg/mL) was carried out in 0.16 M
Trizma base buffer (pH 7.4) at 37 °C in air. The products were
separated by HPLC and analyzed by mass spectrometry.
7.01 (m, 1H, 7a-H), 7.07 (m, 1H, 3a-H), 7.11 (d, J ) 7.8 Hz, 1H,
5a-H), 7.30 (m, J ) 5.8 Hz, 1H, 6a-H), 7.78 (d, J ) 7.3 Hz, 1H,
8a-H), 10.3 (s, 1H, 10a-NH); 13C NMR δ 36.0 (1a′′-C), 69.0 (4a′′-
C), 70.0 (3a′′-C), 72.5 (2a′′-C), 93.0 (4a-C), 104.5 (2a-C), 113.5
(12a-C), 116.0 (5a-C), 118.5 (13a-C), 120.5 (7a-C), 122.5 (8a-C),
1
5
1
29.0 (6a-C), 131.0 (9a-C), 135.0 (3a-C), 141.0 (11a-C); N NMR
Red u ction of Led a k r in by Dith ioth r eitol. The reaction
of ledakrin (1 mM) with DTT (20 mM) was carried out in 0.16
M Trizma base buffer (pH 7.4) at room temperature for 45 min.
The products of the reaction were separated by HPLC (elution
system B). Mass spectra were recorded directly from the
incubation mixture during the reaction progress, after 5, 15,
δ -354.7 (4a′-N), -272.5 (10a-N), -97.9 (1a-N); UV [in a 60:40
ammonium formate (pH 3.5)/MeOH mixture] λmax 230, 260, 295,
+
3
05, 405 nm; MS [M + H] for C22
H
28
N
4
O
2
S
2
m/z 444 (found),
fragment ions at m/z 400 and 372.
(4) N -[3′-(Dim eth yla m in o)p r op yl]-1,9-d ia za n e-1,10-d i-
h yd r oa cr id in e (5): UV [in a 60:40 ammonium formate (pH
3.5)/MeOH mixture] λmax 225, 365, 430 nm; MS [M + H] for
18 20 4
C H N m/z 293 (found), fragment ions at m/z 248 and 220.
(5) N -[3′-(Dim et h yla m in o)p r op yl]-N ,N -d ia m in oet h -
3
yla cr id in e (6): H NMR δ 1.36 (m, 3H, b-CH ), 2.38 (m, 2H,
2
3
0, and 60 min. Products 2-4 were isolated from the reaction
+
mixture after separation by means of low-pressure liquid
chromatography. Products 3 and 4 were eluted from the column
with an isocratic elution at 40% methanol in ammonium formate
2
1
2
1
(50 mM, pH 3.5), and product 2 was eluted at 50% methanol in
ammonium formate (50 mM, pH 3.5). Ammonium formate was
removed from the isolated fractions by separation on the same
2′-H), 3.1 (m, 2H, 3′-H), 4.15 (m, 2H, 1′-H), 5.4 (m, 1H, a-H),
6.6 (d, 1H, 2-H), 7.12 (d, 1H, 4-H), 7.5 (t, 1H, 7-H), 7.68 (t, 1H,