Organic Process Research & Development 2000, 4, 601−605
From Adenosine to 3′-Deoxyadenosine: Development and Scale Up
Sayed Aman, D. Jason Anderson,1 Terrence J. Connolly,* Andrew J. Crittall, and Guijun Ji
Raylo Chemicals Inc., A Laporte Fine Chemicals Company, 8045 Argyll Road, Edmonton, Alberta, T6C 4A9 Canada
Abstract:
Results and Discussion
A manufacturing process has been developed suitable for the
production of 3′-deoxyadenosine (cordycepin, 3′-dA) in 20%
yield from adenosine. The chemistry involves conversion of
adenosine to isomeric 2′,3′-bromoacetates with isolation of the
desired isomer in high purity. Acidic hydrolysis followed by
hydrogenolysis afforded product with a purity of g99%. Unlike
routes reported in the literature, intermediates are isolated as
solids, thus avoiding the use of chromatography for isomer
separation and final product purification.
We embarked on a two-prong approach aimed at devel-
oping a scaleable process for the manufacture of 3′-dA.
Central to this approach was the use of 2-acetoxyisobutyryl
bromide (AIB, Mattock’s bromide) for the conversion of
adenosine to the corresponding adenosine bromoacetates 2
and 3. Robins has demonstrated the utility of Mattock’s
bromide as a reagent for the conversion of natural nucleosides
into various derivatives, including deoxy- derivatives.12-16
Several industrial based labs have also published work using
this reagent for the synthesis of deoxynucleosides.17-20 In
developing our route, it was planned that the generated
bromoacetates 2 and 3 could be used as common intermedi-
ates in either of our approaches, as outlined in Scheme 1.
The major concern for both routes was selectivity. To
proceed via the anhydro intermediate 4, we would capitalize
on the convergence of both isomeric bromoacetates to a
common intermediate, but then we would need to address
the regioselectivity of epoxide ring opening. A synthesis
based on reduction then hydrolysis is also prone to certain
pitfalls. As pointed out succinctly by Chattopadhyaya,7 in
approaches based on reduction of the halo-sugars, extensive
purification is required prior to reduction, or a separation of
2′- and 3′-deoxyadenosine must be done at the last stage.
Considering that we were aiming at scaling up to our pilot
plant, a process that involved careful chromatography was
not a suitable candidate.
In Chattopadhyaya’s synthesis of 3′-dA, the isomeric
bromo-acetates were converted to the common 2′-3′-anhy-
droadenosine 4 by treatment with Amberlite (OH-) resin.
Although the remaining steps to his synthesis would be
cumbersome on-scale due to successive protection, reduction,
and deprotection steps and two back-to-back purifications
on silica gel, we believed that his approach provided a good
starting point for process development.
Approach One: Epoxide Reduction. Epoxide 4 was
conveniently prepared from adenosine via a two-step process.
Addition of neat AIB to a suspension of adenosine in
acetonitrile followed by a basic work up afforded a mixture
of bromoacetates 2 and 3. Rapid conversion to epoxide 4
Introduction
Cordycepin (3′-deoxyadenosine, 3′-dA, 1) is a naturally
occurring antibiotic first isolated from the fungus Cordyceps
militaris.2 Being a 3′-deoxy nucleoside, its mode of action
is due to the chain-terminating ability at the 3′-terminus
during RNA synthesis. We have recently become interested
in this compound and decided to embark on a program aimed
at developing a route suitable for the large-scale manufacture
of 3′-dA.
A number of methods for the synthesis of 3′-dA exist in
the literature. These routes can be classified as belonging to
one of three types of synthesis: total synthesis from non-
nucleoside derivatives,3-5 metal hydride reduction of the
2′,3′-anhydro derivative,6-8 and reduction of the 3′-halo
derivatives using both noble metal catalysts9,10 and tin
hydrides.11,12 Since we were interested in obtaining samples
that were free from the R-anomer as well as having low levels
of the 2′-deoxy derivative, we focused our attention on the
latter two approaches which would use natural adenosine as
the starting material.
* Author for correspondence. Telephone: (780) 468-6060. Fax: (780) 468-
(1) University of Alberta Industrial Internship Participant, June 1998-May
1999.
(2) Cunningham, K. G.; Hutchinson, S. A.; Manson, W.; Spring, F. S. J. Chem.
Soc. 1951, 2299.
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10.1021/op000209x CCC: $19.00 © 2000 American Chemical Society and The Royal Society of Chemistry
Published on Web 10/21/2000
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