Inorganic Chemistry
Article
viscosity values have been calculated from the observed flow time of a
DNA solution (t) corrected for the buffer alone (t0), η = (t − t0)/t0.
Molecular Docking. Molecular docking studies on 1 and 2 have
been performed using HEX 6.1 software and Q-SiteFinder, an
interactive molecular graphics program for interaction and docking
calculations and to classify the possible binding sites of biomolecules.98
DFT calculations have been carried out using Gaussian 09 by the
B3LYP method.102 The geometries of the compounds have been
optimized using a standard 6-31G** basis set for C, H, N, O, B, F, P,
and Cl, while LANL2DZ was used for Ir with the effective core
pseudopotential for the metal.103−106 Coordinates for metal complexes
have been taken from their optimized structures as a .mol file and
transformed to PDB using CHIMERA 1.5.1 software. The crystal
structure of B-DNA (PDB ID: 1BNA) has been taken from the
docked molecules has been made by Discovery Studio 3.5 software. The
default parameters have been used for docking calculations with the
correlation-type shape only, FFT mode at the 3D level, and grid
dimension 6 with receptor range 180 and ligand range 180 with twist
range 360 and distance range 40.
Synthesis of 5-[6-Methoxy-2-(1H-pyrazol-1-yl)quinoline]-
dipyrromethane (B). Pyrrole (10.0 mL) and catalytic amounts of
trifluoroacetic acid (3 drops) were added to a flask containing
aldehyde A (1.5 g, 5.9 mmol) and the contents of the flask stirred at
room temperature for 24 h. After completion of the reaction
[monitored by thin-layer chromatography (TLC)], the ensuing
solution was concentrated to dryness under reduced pressure. The
crude product thus obtained was purified by column chromatography
(SiO2; ethyl acetate/hexane). Yield: 1.63 g, 75%. Anal. Calcd for
C22H19N5O: C, 71.53; H, 5.18; N, 18.96. Found: C, 71.46; H, 5.12; N,
18.90. 1H NMR (CDCl3, 300 MHz): δ3.87 (s, 3H, O methyl), 5.89 (s,
2H, pyrrolic H), 6.11 (s, 2H, pyrrolic H), 6.29 (s, 1H, meso-H), 6.46
(s, 1H, pyrazole H), 6.70 (s, 2H, pyrrolic H), 6.99 (s, 1H, pyrazole H),
7.33 (d, 1H, J = 9.0 Hz, pyrazole H), 7.79 (s, 1H, aromatic H), 7.88 (d,
1H, J = 9.0 Hz, aromatic H), 8.15 (s, 1H, aromatic H), 8.19 (s, 1H,
aromatic H), 9.07 (br, 2H, pyrrolic N−H). 13C NMR (CDCl3, 75
MHz): δ37.6, 55.5, 104.6, 106.4, 106.9, 108.0, 117.3, 123.3, 128.3,
128.9, 130.2, 131.0, 131.1, 132.5, 139.1, 140.7, 141.1, 141.6, 147.1,
158.1. IR (KBr pellets, cm−1): 3412, 3349, 2925, 1595, 1557, 1494,
1448, 1392, 1348, 1281, 1116, 1095, 1041, 940, 778, 768.
Synthesis of L1. DDQ (0.62 g, 2.7 mmol) dissolved in benzene
(50.0 mL) was added dropwise to a solution of B (1.0 g, 2.70 mmol)
in dichloromethane (15.0 mL) under stirring for 4 h. The reaction
mixture was stirred for an additional 2 h. After completion of the
reaction, the contents of the flask was concentrated to dryness under
reduced pressure. The crude product was dissolved in dichloro-
methane and filtered to remove any solid impurities. Triethylamine
(1.5 mL) and BF3·Et2O (3.0 mL) were successively added to this
solution, and the reaction mixture was stirred for 15 min at room
temperature. The progress of the reaction was monitored by TLC.
After completion of reaction, it was filtered and the filtrate washed
three times with water, extracted with dichloromethane, and
concentrated to dryness under reduced pressure. The crude product
thus obtained was charged on a flash column (SiO2; CH2Cl2/hexane).
The dark-orange-red band was collected and concentrated to dryness
to afford the desired product. Yield: 0.34 g, 30%. Anal. Calcd for
C22H16BF2N5O: C, 63.64; H, 3.88; N, 16.87. Found C, 63.58; H, 3.82;
Preparation of the Stock Solutions of Ligands and Their
Complexes. The complexes were dissolved in DMSO (c, 100 mM)
and further diluted in a complete Dulbecco’s modified Eagle’s medium
[DMEM; culture medium consisting of 10% fetal bovine serum
(FBS)]. The maximum concentration of DMSO even at the highest
level of the drugs was less than 0.1% v/v.
Cytotoxicity and Proliferation Assay by MTT Assay. The
cytotoxic impacts of L1, 1, and 2 have been explored using the HeLa
and HEK293 cells by performing MTT assay.107 In a typical
procedure, the HeLa cells were seeded in a 96-well plate using
minimum essential media (MEM; Himedia) containing 10% FBS and
1% penicillin streptomycin and incubated at 37 °C under a humidified
CO2 (5%) environment for 24 h. The cells were treated with L1, 1.
and 2 in the concentration range of 20−100 μM for a period of 24 h.
Subsequently, media were removed and the cells treated with 0.5 mg
mL−1 MTT in MEM over a period of an additional 4 h. Later, the
MTT-containing media were removed, and 100 μL of DMSO was
added to each well. After 15 min of incubation, the plate was read
under a Biotek plate reader at 540 nm. The experiment was performed
in triplicate. The cytotoxicity against the HEK293 cells was performed
by the same protocol using DMEM. The cell viability was calculated
using absorbance at 540 nm.
1
N, 16.82. H NMR (CDCl3, 500 MHz, a few drops of DMSO-d6): δ
3.96 (s, 3H, methoxy), 6.31 (d, 1H, J = 1.5 Hz, aromatic H), 6.41 (d,
2H, J = 3.0 Hz, pyrrolic H), 6.69 (d, 2H, J = 3.5 Hz, pyrrolic H), 7.15
(d, 1H, J = 3.0 Hz, aromatic H), 7.44 (s, 1H, J = 2.0 Hz, aromatic H),
7.52 (m, 1H, aromatic H), 7.88 (s, 2H, pyrrolic H), 8.04 (d, 1H, J =
10.0 Hz, aromatic H), 8.24 (s, 1H, aromatic H), 8.36 (d, 1H, J = 3.0
Hz, aromatic H). 13C NMR (CDCl3, 125 MHz, a few drops of DMSO-
d6): δ 55.8, 105.2, 107.9, 118.5, 120.5, 125.0, 126.8, 129.5, 130.2,
135.4, 140.5, 142.1, 143.0, 144.0, 144.6, 158.7. IR (KBr pellets, cm−1):
3106, 2929, 1592, 1557, 1487, 1411, 1387, 1357, 1257, 1140, 1108,
975, 764. ESI-MS. Calcd for (M + Na)+: m/z 438.1314. Found: m/z
438.1351.
%cell viability = [mean o.d. of the treated cell/mean o.d. of the
control] × 100
Bioimaging Studies. The cellular uptake for L1, 1, and 2 has been
investigated by confocal laser scanning microscopy. HeLa cells were
seeded in 27 mm confocal dishes and incubated for 24 h. Further, the
cells were treated with L1, 1, and 2 for a period of 4 h and
subsequently washed one time with PBS. The intracellular
fluorescence was studied using an excitation laser (515 nm) and
emission recorded in the range 525−600 nm.
Synthesis. Synthesis of 6-Methoxy-2-(1H-pyrazol-1-yl)quinoline-
3-carbaldehyde (A). A was prepared by reacting 2-chloro-6-
methoxyquinoline-3-carbaldehyde (2.21 g, 10 mmol) with 1H-pyrazole
(1.02 g, 15 mmol) in toluene (25 mL) and heating under refluxing
conditions with continuous stirring for 48 h. After cooling, the reaction
mixture was treated with a saturated NaHCO3 solution and extracted
with CH2Cl2 (100 mL × 2). The organic layer was separated, dried,
and concentrated to dryness under reduced pressure. The crude
product thus obtained was purified by column chromatography (SiO2;
ethyl acetate/hexane; 2.02 g, 80%). Anal. Calcd for C14H11N3O2: C,
66.40; H, 4.38; N, 16.59. Found: C, 66.35; H, 4.34; N, 16.55. 1H NMR
(CDCl3): δ 3.93 (s, 3H, OCH3), 6.56 (s, 1H), 7.24 (d, 2H, J = 7.2
Hz), 7.48 (d, 1H, J = 6.9 Hz), 7.82 (s, 1H), 7.94 (d, 1H, J = 8.7 Hz),
8.65 (s, 2H), 10.67 (s, 1H), 11.25 (s, 1H). IR (KBr pellets, cm−1):
3043, 2872, 1688, 1661, 1614, 1579, 1490, 1455, 1369, 1333, 1165,
1132, 1046, 940, 807, 761, 749.
Synthesis of 1. The dimeric complex [(phpy)2Ir(μ-Cl)]2 (0.12 g,
0.1 mmol) was added to a suspension of L1 (0.10 g, 0.24 mmol) in 1:1
CH2Cl2/MeOH (50.0 mL) and reaction mixture stirred for 12 h at
room temperature. After filtration to remove any solid impurities, a
methanolic solution of NH4PF6 (0.040 g, 0.25 mmol, 10 mL) was
added to it and the resulting mixture stirred for 4 h. The volume of the
solution was reduced to half under reduced pressure and precipitated
using diethyl ether. The resulting solid was filtered and washed twice
with diethyl ether. Yield: 75% (0.16 g). Anal. Calcd for
C44H32BF8IrN7OP: C, 49.82; H, 3.04; N, 9.24. Found: C, 49.75; H,
1
3.10; N, 9.18. H NMR (CDCl3, 500 MHz): δ 3.90 (s, 3H, OCH3),
6.05 (d, 1H, J = 7.5 Hz, aromatic H), 6.42 (d, 2H, J = 4.5 Hz, aromatic
H), 6.45 (d, 1H, J = 3.0 Hz, aromatic H), 6.52 (s, 1H, aromatic H),
6.70 (s, 1H, aromatic H), 6.81 (s, 1H, aromatic H), 6.98−7.07 (m, 6H,
aromatic H), 7.24 (d, 2H, J = 3.0 Hz, aromatic H), 7.29 (s, 1H,
aromatic H), 7.40 (d, 1H, J = 4.5 Hz, aromatic H), 7.61−7.66 (m, 3H,
aromatic H), 7.81 (d, 1H, J = 10.5 Hz, aromatic H), 7.88 (s, 1H,
aromatic H), 7.94 (s, 1H, aromatic H), 7.98 (s, 1H, aromatic H), 8.12
(t, 2H, J = 6.5 Hz, aromatic H), 8.22 (d, 1H, J = 6.5 Hz, aromatic H),
8.26 (s, 1H, aromatic H), 8.50 (s, 1H, aromatic H).13C NMR (CDCl3,
125 MHz): δ 56.1 (OCH3), 106.6, 112.0, 119.8, 122.8, 123.2, 124.1,
L
Inorg. Chem. XXXX, XXX, XXX−XXX