Page 5 of 9
The Journal of Organic Chemistry
Synthesis of 2,2'-{[ethane-1,2-
diylbis(azanediyl)]bis(methylene)}bis[4-(2-azidoethyl)phenol]
1e):
1aa in the presence of 0.5 equiv of Cu(OAc)
ascorbate at room temperature gave 47% ( 0.06 g, 0.07mmol) as
isolated yield. In this case, Cu(OAC) and sodium ascorbate were
added directly and the reaction mixture stirred for 30 min.
Characterization data for di-tert-Butyl 2,2'-[ethane-1,2-diylbis({2-
hydroxy-5-[2-(4-phenyl-1H-1,2,3-triazol-1-
2
and 1.0 equiv of sodium
1
2
3
4
5
6
7
8
9
(
2
Compound 1d (1.91 g, 4.69 mmol, 1 equiv) was dissolved in warm
,2,2-trifluoroethanol (40 mL, ~50 °C) and then cooled in an ice-bath.
To this solution was added NaBH (0.71 g, 18.78 mmol, 4 equiv) in
2
4
yl)ethyl]benzyl}azanediyl)]diacetate (1aa): IR(ATR): 2929 (w), 1726
portions and then the reaction mixture was allowed to warm up to room
temperature. After being stirred overnight under an inert gas
atmosphere, the reaction was quenched with water (100 mL), dried over
1
(
(
m), 1152 (s), 765 (m). H NMR (400 MHz, CDCl
3
, 25 °C): = 9.57
3
4
s, br, 2H, COH), 7.76 (dd, 4H, JH–H = 7.8 Hz, JH–H = 1.4 Hz, Ph-
3
substituent, ortho-H), 7.52 (s, 2H, CHN), 7.38 (t, 4H, JH–H = 7.6 Hz,
Ph-substituent, meta-H), 7.30 (m, 2H, Ph-substituent, para-H), 6.97
2 4
Na SO , filtered and evaporated to provide product 1e as a colorless to
pale yellow solid in quantitative yield. NMR showed no considerable
impurities and thus this compound was used in the next step without
further purification. However, for structural characterization product 1e
was further purified by preparative HPLC. MP 99-102 °C. IR (ATR):
3
4
3
(
dd, 2H, JH–H = 8.2 Hz, JH–H = 2.2 Hz, CHCHCOH), 6.76 (d, 2H, JH–H
4
1
1
1
1
1
1
1
1
1
1
2
2
2
2
2
2
2
2
2
2
3
3
3
3
3
3
3
3
3
3
4
4
4
4
4
4
4
4
4
4
5
5
5
5
5
5
5
5
5
5
6
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
= 8.1 Hz, CHCHCOH), 6.52 (d, 2H, JH–H = 2.2 Hz, CCHC), 4.56 (t,
3
N), 3.53 (s, 4H, BnCH
CO ), 2.45 (s, 4H, N-C
) ppm. C{ H} NMR (100 MHz, CDCl , 25 °C):
2
), 156.6 (COH), 147.5 (NCCH), 130.8 (Ph-substituent,
3
4
H
H, JH–H = 7.2 Hz, CCH
2
CH
2
2
), 3.12 (t, 4H, JH–
= 7.2 Hz, CCH CH N), 3.08 (s, 4H, CH
2
2
2
2
2 4
H -
−
1 1
= 3287 (m), 2833 (w), 1614 (m), 1458 (s) cm . H NMR (400 MHz,
13
1
N), 1.46 (s, 18H, CH
= 170.4 (CO
ipso-C), 129.9 ( CH
Ph-substituent, meta-C), 127.6 (Ph-substituent, para-C), 125.8 (Ph-
substituent, ortho-C), 122.1 (CCH CH N), 120.25 (CHN), 116.9
3
3
3
4
CDCl , 25 °C): = 7.02 (dd, JH–H = 8.3 Hz, JH–H = 2.1 Hz, 2H,
3
4
3
CHCHCOH), 6.83 (d, JH–H = 2.1 Hz, 2H, CCHC), 6.78 (d, JH–H = 8.3
Bn
2
C), 129.5 (CCHC), 129.0 (CHCHCO), 128.2
Bn
3
Hz, 2H, CHCHCOH), 3.98 (s, 4H, CH
2
), 3,44 (t, JH–H = 7.2 Hz, 4H,
(
3
CH
2
N
3
), 2.84 (s, 4H, CH
2
NH), 2.78 (t, JH–H = 7.2 Hz, 4H, CH
2
CH
, 25 °C): = 156.9 (COH),
129.3 (CHCHCOH), 129.0 (CCHC), 128.7 (CHCCH), 122.35
2 3
N )
2
2
13
1
ppm. C{ H} NMR (100 MHz, CDCl
3
Bn
(
(
CHCHCO), 82.3 (CCH
CCH CH N), 49.8 (N-C
HRMS (ESI+): m/z [M+H] Calcd for C48H N O
59 8 6
3
), 57.8 ( C), 55.7 (CH
-N), 36.1 (CCH CH N), 28.2 (CH
: 843.4552; Found:
2
CO
2
), 52.2
2
2
2
H
4
2
2
3
) ppm.
Bn
Bn
(
(
CH
CH NH), 34.70 (CH
: 407.2; Found: 407.2 (100 %). HRMS (ESI+): m/z
2
C), 116.8 (C(OH)CHCH), 52.9 (CH
2
N
3
), 52.7 ( CH
2
+
), 48.0
+
2
2
CH ) ppm. MS (MALDI): m/z [M+H] Calcd
2 3
N
843.4556 (100%).
27 8 2
for C20H N O
Characterization data for diethyl 1,1'-{[({2,2,13,13-tetramethyl-4,11-
dioxo-3,12-dioxa-6,9-diazatetradecane-6,9-diyl}bis(methylene))bis(4-
hydroxy-3,1-phenylene)]bis(ethane-2,1-diyl)}bis(1H-1,2,3-triazole-4-
+
[MH+(H
2 2 4 2 2 4 3 53 16 4
N-C H -NH )+2(PhOH-C H -N )] Calcd for C38H N O :
797.4430; Found: 797.4417 (99%).
carboxylate) (1ab): IR(ATR): 2980 (w), 1722 (s), 1153 (s), 775 (m).
Synthesis of di-tert-butyl 2,2'-(ethane-1,2-diylbis{[5-(2-azidoethyl)-
-hydroxybenzyl]azanediyl}) diacetate [HBED-NN-di(t-Bu ester)]
1)
1
H NMR (400 MHz, CDCl , 25 °C): = 9.63 (s, br, 2H, COH), 7.83 (s,
3
2
(
3
4
2H, CHN), 6.92 (dd, 4H, JH–H = 8.3 Hz, JH–H = 2.2 Hz, CHCHCOH),
6
CCHC), 4.58 (t, 4H, JH–H = 7.2 Hz, CCH
3
4
.76 (d, JH–H = 8.3 Hz, 2H, CHCHCOH), 6.55 (d, JH–H = 2.2 Hz, 2H,
A mixture of compound 1f (0.56 g, 1.36 mmol, 1 equiv), anhydrous
Na CO (0.58 g, 5.46 mmol, 4 equiv) and tert-butyl 2-bromoacetate
(0.56 g, 2.86 mmol, 2.1 equiv) was suspended in anhydrous acetonitrile
25 mL) and stirred under reflux conditions for 5 h, and then the
3
N), 4.39 (q, 4H, 3JH–H
), 3.16 (s, 4H, CH
2
CH
2
=
), 3.62 (s, 4H, BnCH
2
3
7
4
.2 Hz, CH CH
H, JH–H = 7.0 Hz, CCH
2 2
CO ), 3.11 (t,
3
2
2
3
2
CH
), 1.39 (t, 6H, JH–H = 7.2 Hz, CH
MHz, CDCl , 25 °C): = 170.4 (CO
COH), 140.1 (NCCH), 129.8 (CCHC), 129.3 (CHCHCO), 127.9
2
N), 2.60 (s, 4H, N-C -N), 1.46 (s, 18H,
2 4
H
(
3
13
1
CCH
3
3
CH
2
) ppm. C{ H} NMR (100
reaction mixture was cooled to room temperature and filtered. The
solvent was removed under reduced pressure and the residue was
3
2
t-Bu), 160.9 (CO
2
Et), 156.7
(
(
(
(
purified by flash column chromatography (R
f
= 0.4, hexane–EtOAc,
Bn
2
CHN), 127.0 (CHCCH), 122.2 ( CH C), 117.1 (CHCHCO), 82.4
2:1). The obtained product was recovered in ethanol to give HBED-
NN-di(t-Bu ester) (1) as a colorless solid (0.76 g, 1.05 mmol, 77%).
MP 93-95 °C. IR (ATR): 2975 (w), 2091 (s), 1733 (s), 1500 (m), 1152
Bn
CCH
CCH
3
), 61.4 (CH
CH N), 50.0 (N-C
) ppm. HRMS (ESI+): m/z [M+H] Calcd for C42
35.4349; Found: 835.4356 (100%). Elemental Analysis (analysis no.
2221): Anal. Calcd for C42 10: C, 60.42; H, 7.00; N, 13.42.
2
CH
3
), 57.9 ( C), 55.7 (CH
2
CO
2
), 52.4
2
2
2
H
4
-N), 35.9 (CCH CH N), 28.2 (CCH
2
2
3
), 14.5
+
(CH
8
4
2
CH
3
59 8 10
H N O :
−
1 1
(
7
s) cm . H NMR (400 MHz, CDCl
3
, 25 °C): = 9.62 (s, 2H, COH),
3
4
3
.02 (dd, JH–H = 8.2 Hz, JH–H = 2.2 Hz, 2H, CHCHCOH), 6.79 (d, JH–
= 8.2 Hz, 2H, CHCHCOH), 6.76 (d, JH–H = 2.2 Hz, 2H, CCHC), 3.71
(s, 4H, CH
CH CO
N), 1.46 (s, 18H, CH
58 8
H N O
4
H
Found: C, 60.20; H, 6.85; N, 13.03.
Characterization data for di-tert-Butyl 2,2'-{ethane-1,2-diylbis[(2-
hydroxy-5-{2-[4-(hydroxymethyl)-1H-1,2,3-triazol-1-
Bn
3
2
), 3.42 (t, JH–H = 7.3 Hz, 4H, CH
2
N
3
), 3.16 (s, 4H,
3
2
2
), 2.77 (t, JH–H = 7.3 Hz, 4H, CH
2
CH
) ppm. C{ H} NMR (100 MHz, CDCl
), 156.4 (COH), 129.7 (CCHC), 129.6 (CHCHCOH),
2
N
3
), 2.68 (s, 4H, N-C
2 4
H -
1
3
1
3
3
, 25 °C):
yl]ethyl}benzyl)azanediyl]}diacetate (1ac): IR(ATR): 3323 (w), 2931
1
5
(CH
C
C
= 170.1 (CO
28.6 (CHCCH), 121.8 ( CH
2
1
(
(
3
w), 1725 (m), 1154 (s). H NMR (400 MHz, CDCl , 25 °C): = 7.33
4
Bn
2
C), 116.8 (CHCHCOH), 82.2 (CCH
), 52.9 (CH ), 50.4 (N-C -N), 34.7
) ppm. HRMS (ESI+): m/z [M+H] Calcd for
3
),
s, 2H, CHN), 6.95 (dd, 4H,
CHCHCOH), 6.76 (d, JH–H = 8.2 Hz, 2H, CHCHCOH), 6.49 (d, JH–H
3
JH–H = 8.2 Hz, JH–H = 2.2 Hz,
Bn
8.10 ( CH
CH ), 28.2 (CH
: 639.3613; Found: 639.3634 (18%), [M+Na] , Calcd for
NaO 661.3433; Found: 661.3451 (36%). Elemental
: C, 60.17;
2
), 55.6 (CH
2
CO
2
2
N
3
2
H
4
3
4
+
N
3
3
3
2
2
=
2.1 Hz, 2H, CCHC), 4.72 (s, 4H, CH
OH), 4.50 (t, 4H, JH–H = 7.3
), 3.18 (s, 4H, CH CO ), 3.10 (t,
N), 2.60 (s, 4H, N-C -N), 1.46 (s, 18H,
) ppm. 13C{ H} NMR (100 MHz, CDCl
, 25 °C): = 170.51
2
t-Bu), 156.5 (COH), 147.6 (NCCH), 129.9 (CCHC), 129.4
2
+
H
H
47
N
N
8
O
6
Bn
32
Hz, CCH
4
CCH
(
CH
N), 3.58 (s, 4H, CH
CH
2
2
2
2
2
:
3
32
46
8
6
H, JH–H = 7.3 Hz, CCH
2 4
H
2
2
Analysis (analysis no. 41992): Anal. Calcd for C32
H
46
N
8
O
6
1
3
3
H, 7.26; N, 17.54. Found: C, 60.17; H, 7.29; N, 17.28.
CO
CHCHCO), 127.6 (CHCCH), 122.2 (CHN or CH
Bn
(
2
C), 122.1 (CHN
Syntheses and characterization of substrates 1aa, 1ab and 1ac:
Bn
Bn
or CH
(CH OH), 56.0 (CH
(CCH CH N), 28.2 (CCH
55 8 8
for C38H N O : 751.4137; Found: 751.4142 (100%).
2
C), 117.0 (CHCHCO), 82.5 (CCH
CO ), 52.1 (CCH CH N), 50.2 (N-C
) ppm. HRMS (ESI+): m/z [M+H] Calcd
3
), 57.8 ( C), 56.7
These compounds were synthesized according to the standard CuAAC
2
2
2
2
2
2 4
H
-N), 36.1
5
4
+
reaction. To a mixture of HBED-NN (0.1 g, 0.16 mmol, 1 equiv) and
a terminal alkyne (0.39 mmol, 2.5 equiv) in CH CN/H O (0.5 mL: 0.3
mL) were added 78 µL of an aqueous Cu(OAc) solution (0.1 M; 7.8
2
2
3
3
2
2
Synthesis of 2,2'-[ethane-1,2-diylbis({2-hydroxy-5-[2-(4-phenyl-
H-1,2,3-triazol-1-yl)ethyl]benzyl}azanediyl)]diacetic acid (2):
µmol, 0.05 equiv) and 156 µL of an aqueous sodium ascorbate solution
(0.1 M; 15.6 µmol, 0.1 equiv). The reaction mixture stirred at 80 °C
and reaction progress was followed by HPLC and TLC. After being
stirred for 1 h, the reaction mixture was cooled to room temperature
and the product isolated by preparative HPLC. Note: Product 1aa was
additionally filtered through a short column packed with silica gel
(eluent: CHCl ). Isolated yields for 1aa, 1ab and 1ac were 59% (0.08
3
g, 0.09 mmol), 43% (0.06 g, 0.07 mmol) and 50% (0.06 g, 0.08 mmol),
respectively. Each product is a colorless solid. Synthesis of compound
1
Compound 1 (0.60 g, 0.94 mmol, 1 equiv) and phenyl acetylene (0.24
g, 2.35 mmol, 2.5 equiv) were dissolved in CH CN (2 mL). To this
mixture were added 470 µL of an aqueous Cu(OAc) solution (0.1 M;
7 µmol, 0.05 equiv) and 940 µL of an aqueous sodium ascorbate
3
2
4
solution (0.1 M; 94 µmol, 0.1 equiv). After being stirred at 80 °C for 1
h, the reaction mixture was cooled to room temperature and filtered
through a thick layer of silica gel (eluent: CHCl ). The solvent was
3
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