566 Elton L. Menon and Harry Morrison
Table 1. Effects of wavelength, temperature, pH, singlet oxygen quencher and presence of oxygen and solvent on (E)-UCA photolysis
with UVA light*
Time of
irradiation
(h)
% destruction
Temperature of UCA
%
Sample description
Light source
Solvent
pH or pD
(Њ
C)
(Z ϩ E) isomerization
(E)-UCA
(E)-UCA
(E)-UCA
(E)-UCA
(E)-UCA
(E)-UCA
(E)-UCA
(E)-UCA
Ͼ330
Ͼ330
Ͼ330
Ͼ330
Ͼ330
Ͼ330
Ͼ311
Ͼ330
Ͼ330
20
20
20
20
20
20
0.5
20
20
D2O
D2O
D2O
D2O
D2O
H2O
D2O
D2O
D2O
5.5
7.0
7.8
7.8
7.8
8.0
7.8
7.8
7.8
8
8
8
0
30
30
30
30
30
2.0
3.5
1.8
1.0
1.5
1.0
6.0
50.0
5.0
8.0
15.4
60.2
11.5
80.0
14.0
0
ϩ
15 equivalents of histidine
3.5
0
(E)-UCA under Ar
*In all cases the solution occupies ca 25% of the reaction vessel volume, i.e. there is a large excess of oxygen present.
linckrodt (Paris, KY). Deuterium oxide was from Cambridge Isotope
Laboratories (Andover, MA). EM Quant peroxide test strips were
lutions. After irradiation, 10 L of 10ϫ stop buffer–loading solution
(50% glycerol, 0.2% bromophenol blue, 0.05 M EDTA in 100 mM
Tris buffer, pH 8) was added to each sample, and the samples were
loaded onto a 0.8% agarose gel containing ethidium bromide (0.5
from EM Science (Gibbstown, NJ).
Instruments. An Orion 290A pH meter with a Triode pH elec-
trode was used to measure the pH of solutions. The pD values of
buffered D2O solutions were uncorrected pH meter readings. UV
absorption spectroscopy was done using a Varian Cary 100 scanning
UV–visible spectrophotometer. Samples were analyzed in 1 cm2
matched quartz cells from Wilmad (Buena, NJ). HPLC analyses
were performed using a Varian 5000 series liquid chromatograph
g/mL). The gel was run in 0.5
ϫ Tris-borate EDTA buffer contain-
ing ethidium bromide (0.5 g/mL). After electrophoresis at 132 V
for approximately 1.5 h, the DNA was visualized by UV light using
a NucleoVision gel analyzer. Gel bands were quantified using Gel
Expert software, with the intensities corrected for the decreased
binding of ethidium bromide to supercoiled DNA (i.e. circular su-
percoiled plasmid DNA [Form I] is 1.4 times less responsive than
circular relaxed plasmid [Form II] or linear plasmid DNA) (13,14).
fitted with a 7125 Rheodyne injection valve and a 200 L injection
loop. A Varian 2050 variable wavelength detector set at 254 nm
monitored the column effluent, and the data were recorded using
Packard Radiomatic Flo-One analysis software. An Alltech Econosil
RESULTS AND DISCUSSION
C-8 (4.6 mm
ϫ 25 cm) reversed-phase stainless steel column was
used with the following isocratic condition: 1 mL/min 100% 50 mM
ammonium acetate buffer (pH 5). The retention times were 5.0 and
9.6 min for the E- and Z-isomers, respectively. For quantitative work
the (Z)-isomer area counts were multiplied by a factor of 1.4 to
correct for its lower extinction coefficient compared with that of (E)-
UCA (6).
UCA-sensitized formation of singlet oxygen by UVA
light
In our initial studies we confirmed that the sensitized for-
mation of singlet oxygen by UVA light could be monitored
using the singlet oxygen–initiated decomposition of UCA as
our probe (15). A 2 mL solution of 3 mM (E)-UCA in 50
mM phosphate buffer, pH 8, was saturated with O2 and ir-
Irradiations. Photolyses of UCA with Ͼ 330 nm light used
cylindrical Pyrex tubes (12
ϫ 150 mm) in a photolysis box in which
samples in a turntable revolved around a water-cooled 450 W Han-
ovia medium-pressure mercury lamp filtered with a uranium yellow
glass filter. The incident light at the tubes was measured as 4.6 mW/
cm2 using a UVX Radiometer with a UVX-36 sensor, from
UltraViolet Products, Inc. (San Gabriel, CA). The samples were im-
mersed in a temperature-controlled water bath. Alternatively, mono-
chromatic 311 nm radiation was provided by Philips Ultraviolet B
low-pressure 311 nm lamps in a fan-cooled photolysis box with a
turntable occupying a central position. Singlet oxygen was generated
by the irradiation of silica-bound rose bengal using a slide projec-
tor’s 500 W tungsten lamp filtered with an LL-500 Corion corp.
filter that transmits Ͼ 500 nm. The presence of peroxide in solu-
radiated at 30ЊC with Ͼ 330 nm for 20 h. This is a region
where UCA shows negligible light absorption (8,16). HPLC
analysis indicated that 6% of the initial (E)-UCA had un-
dergone isomerization, whereas 14% of the total UCA (i.e.
E- plus Z-isomers) had been destroyed. The reaction de-
pended on the presence of oxygen and was greatly enhanced
when D2O was used as solvent. In the latter case there was
as much as 80% destruction of the total UCA after 20 h of
irradiation. Also, reaction in D2O was quenched by histidine,
a known singlet oxygen scavenger (17). In addition, this re-
action showed temperature and pH dependence, being more
reactive at higher temperatures and at alkaline pH. At pH 8,
UCA exists predominantly as the carboxylate anion (6). Nei-
ther spectroscopy nor theoretical calculations give evidence
for any significant electronic perturbations at wavelengths
greater than 320 nm across the pH 6–8 region (9). It is in-
teresting that histidine also shows a strong increase in its
reactivity with independently generated singlet oxygen on
going from pH 6 to 8 in a manner that matches well with
the histidine pK curve (18), i.e. the protonated imidazole
ring is relatively unreactive with singlet oxygen. The salient
data are summarized in Table 1.
tion was detected using EM Quant peroxide test strips.
Photocleavage of
phosphate buffer, pD 7.8, was added to 30
174 phage DNA to obtain a DNA solution, which was 205
base pairs. Two different solutions were irradiated with DNA: (1) a
3 mM solution of 12 recrystallized (E)-UCA in 50 mM phosphate
X-174 phage DNA. Sixty microliters of 50 mM
L of commercial X-
M in
ϫ
buffer, pD 7.8; and (2) a 15 mL 3 mM solution of recrystallized (E)-
UCA in 50 mM phosphate buffer, pD 7.8, which was saturated with
O2, capped, sealed with parafilm and irradiated with Ͼ 330 nm
for 34 h. These solutions were saturated with O2 or Ar, and 7
was placed into end-tapered tubes containing 3 L of X-174 phage
DNA solution. These were inserted into Corning 10 75 mm Pyrex
L
ϫ
test tubes, the tubes were capped with septa and parafilm sealed,
and the atmosphere was saturated with O2 or Ar. Some experiments
included histidine hydrochloride (45 mM) to scavenge singlet oxy-
gen, 2-propanol (0.5 M) as a free radical scavenger, catalase (25
mL) and SOD (25 g/mL). Controls also included unirradiated
DNA, irradiated DNA free of drug and unirradiated DNA–UCA so-
g/
These results are in contrast with what one observes when