Page 7 of 12
The Journal of Organic Chemistry
General procedure for sialylations in Table 1. Acceptors
24.9, 25.5, 36.8, 53.1, 59.3, 62.1, 63.2, 68.9, 69.8, 69.8, 71.0,
72.2, 72.5, 72.9, 73.7, 74.5, 74.9, 75.9, 76.4, 79.3, 99.8, 101.6,
103.3, 154.5, 166.7, 168.9, 169.5, 170.0, 170.2, 170.7, 170.7,
170.8, 171.0, 171.3, 173.0. HRMS (ESI) m/z: [M + Na] calcd
58 2
for C45H N O30Na 1129.2967; Found 1129.2948.
1
2
3
4
5
6
7
8
9
1
1
1
1
1
1
1
1
1
1
2
2
2
2
2
2
2
2
2
2
3
3
3
3
3
3
3
3
3
3
4
4
4
4
4
4
4
4
4
4
5
5
5
5
5
5
5
5
5
5
6
(1.0 equiv) were co-distilled with toluene under reduced pres-
sure (3X) and then were combined with freshly prepared sialyl
phosphate donor 3 (1.5 equiv) followed by high vacuum for 3
hours. The donor acceptor pair were then dissolved in dry
+
2 2
CH Cl (volume calculated to make 20 mM solution of accep-
Phenyl (methyl 5-acetamido-7,8,9-tri-O-acetyl-5-N,4-O-car-
bonyl-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyra-
nosylonate)-(2→3)-(6-O-pivaloyl-β-D-galactopyranosyl)-
tor), 4 Å molecular sieves were added (mass = 4 x acceptor
mass), gas was exchanged with Ar, and the resulting solution
was stirred at room temperature for 1 hour. The reaction mix-
ture was cooled to -78 °C and TMSOTf (1.5 equiv) was added
to initiate the reaction. The reaction was stirred at -78 °C for 1
(1→4)-2,6-di-O-pivaloyl-1-thio-β-D-glucopyranoside
(11).
Compound 11 was purified by silica flash chromatography us-
ing toluene:acetone (1:1) as the eluent to provide 11 as a white
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
1
2
3
4
5
6
7
8
9
0
hour and the reaction was quenched with saturated NaHCO
3
1
solid (0.16 g, 0.14 mmol, 52% yield). H NMR (CDCl
3
, 600
with vigorous stirring as the reaction slowly warmed to room
temperature. The quenched reaction mixture was then diluted
MHz): δ = 1.20 (9H, s), 1.21 (9H, s), 1.26 (9H, s), 2.05 (3H, s),
.13 (3H, s), 2.16 (3H, s), 2.21 (1H, t, J = 13.0 Hz), 2.49 (1H,
2
with CH
2 2
Cl (10 mL) and the organic layer was dried over
d, J = 2.64Hz), 2.52 (3H, s), 3.00 (1H, dd, J = 3. 5, 12.3 Hz),
3.20 (1H, d, J = 1.7 Hz), 3.52 (1H, t, J =9.2 Hz), 3.70 (2H, m),
3.78 (4H, m), 3.84 (3H, s), 4.04 (2H, m), 4.09 (1H, dd, J = 7.9,
12.1 Hz), 4.15 (1H, dd, J = 3.3, 9.6 Hz), 4.23 (1H, dd, J = 8.1,
Na SO , filtered, and concentrated under reduced pressure. The
2
4
1
crude product was then analyzed by H NMR to determine α:β
ratios based on the integrals of the Neu5Ac C3 equatorial pro-
tons. Crudes were then purified by silica flash chromatography
using appropriate solvent mixtures to isolate α:β mixtures of the
products to obtain the isolated yield. Isolated and pure α
anomers were then characterized.
1
1.9 Hz), 4.31 (1H, d, J = 1.0 Hz), 4.40 (1H, dd, J = 4.2, 11.9
Hz), 4.47 (1H, dd, J = 2.6, 12.3 Hz), 4.51 (1H, d, J = 7.9 Hz),
.65 (1H, dd, J = 1.1, 9.5 Hz), 4.71 (1H, d, J = 10.3 Hz), 4.88
1H, dd, J = 1.5, 12.1 Hz), 4.94 (1H, dd, J = 9.4, 10.1 Hz), 5.55
(1H, td, J = 4.1, 10.7 Hz), 5.70 (1H, dd, J = 1.1, 8.5 Hz), 7.28
4
(
Phenyl (methyl 5-acetamido-7,8,9-tri-O-acetyl-5-N,4-O-car-
bonyl-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyra-
nosylonate)-(2→3)-(2,6-di-O-acetyl-β-D-galactopyranosyl)-
13
1
3
(3H, m), 7.51 (2H, m). C{ H} NMR (CDCl , 150 MHz): δ =
20.7, 20.9, 21.2, 24.7, 27.1, 27.1, 27.2, 36.6, 38.7, 38.8, 53.5,
58.8, 63.2, 63.3, 63.6, 67.9, 68.8, 68.9, 70.7, 71.2, 72.6, 74.4,
74.7, 76.7, 76.9, 77.2, 82.2, 86.6, 97.9, 104.2, 127.6, 128.9,
131.8, 134.0, 153.3, 168.3, 169.8, 170.4, 170.7, 172.0, 176.7,
177.9, 178.6. HRMS (ESI) m/z: [M + Na]+ calcd for
(
1→4)-2,3,6-tri-O-acetyl-1-thio-β-D-glucopyranoside
(9).
Compound 9 was purified by silica flash chromatography using
toluene:acetone (1:1) as the eluent to provide 9 as a white solid
1
(0.29 g, 0.26 mmol, 68% yield). H NMR (CDCl
3
, 600 MHz):
δ = 2.01 (3H, s), 2.02 (3H, s), 2.03 (3H, s), 2.07 (6H, s), 2.08
3H, s), 2.10 (3H, s), 2.12 (1H, m), 2.16 (3H, s), 2.49 (3H, s),
.70 (1H, d, J = 5.0 Hz), 2.83 (1H, dd, J = 3.5, 12.1 Hz), 3.67
3H, m), 3.77 (2H, m), 3.81 (4H, m), 4.01 (2H, m), 4.09 (1H, t,
J = 3.8 Hz), 4.14 (1H, dd, J = 6.3, 11.91 Hz), 4.40 (1H, dd, J =
.8, 12.2 Hz), 4.51 (2H, m), 4.59 (1H, dd, J = 1.5, 9.4 Hz), 4.68
1H, d, J = 10.1 Hz), 4.87 (2H, m), 5.16 (1H, dd, J = 7.9, 10.2
Hz), 5.20 (1H, t, J = 9.2 Hz), 5.36 (1H, dt, J = 2.8, 7.6 Hz), 5.56
C
52
H
73NO25SNa 1166.4085; Found 1166.4072.
(
2
(
Phenyl (methyl 5-acetamido-7,8,9-tri-O-acetyl-5-N,4-O-car-
bonyl-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyra-
nosylonate)-(2→3)-2-O-benzoyl-6-O-benzyl-1-thio-β-D-galac-
topyranoside (12). Compound 12 was purified by silica flash
chromatography using hexanes:EtOAc (1:1) as the eluent to
2
(
1
provide 12 as a white solid (1.30 g, 1.41 mmol, 89% yield). H
NMR (CDCl
3
, 600 MHz): δ = 1.48 (3H, s), 2.02 (3H, s), 2.07
1
3
1
(1H, dd, J = 1.6, 7.7 Hz), 7.29 (3H, m), 7.46 (2H, m). C{ H}
NMR (CDCl , 150 MHz): δ = 20.8, 20.9, 20.9, 21.0, 21.0, 21.0,
21.2, 21.6, 24.8, 35.8, 53.5, 53.6, 59.0, 62.5, 63.0, 63.5, 66.4,
(
(
(
1H, t, J = 6.3 Hz), 2.13 (3H, s), 2.44 (3H, s), 2.74 (1H, br), 2.86
1H, dd, J = 3.4, 12.0 Hz), 3.55 (1H, dd, J = 9.4, 11.2 Hz), 3.73
3H, s), 3.85 (5H, m), 3.95 (1H, dd, J = 7.4, 12.2 Hz), 4.43 (1H,
3
6
9
1
9.3, 69.7, 70.4, 71.9, 72.8, 73.5, 73.9, 74.8, 76.0, 76.1, 85.4,
9.3, 100.9, 128.3, 129.0, 132.0, 133.0, 153.6, 168.4, 169.4,
dd, J = 2.5, 12.3 Hz), 4.49 (1H, dd, J = 1.8, 9.4 Hz), 4.52 (1H,
dd, J = 3.1, 9.5 Hz), 4.61 (2H, m), 4.96 (1H, d, J = 10.0 Hz),
5.43 (1H, t, J = 9.7 Hz), 5.49 (1H, dd, J = 1.9, 8.7 Hz), 5.55
69.8, 169.9, 170.2, 170.3, 170.4, 170.5, 171.2, 172.3. HRMS
+
(
ESI) m/z: [M + Na] calcd for C47
H
59NO27SNa 1124.2887;
(1H, td, J = 2.4, 8.7 Hz), 7.25 (3H, m), 7.35 (5H, m), 7.49 (4H,
Found 1124.2898.
m), 7.61 (1H, t, J = 7.4 Hz), 8.18 (2H, dd, J = 1.0, 8.1 Hz).
1
3
1
Succinimidyl (methyl 5-acetamido-7,8,9-tri-O-acetyl-5-N,4-
O-carbonyl-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopy-
ranosylonate)-(2→3)-(2,6-di-O-acetyl-β-D-galactopyranosyl)-
3
C{ H} NMR (CDCl , 150 MHz): δ = 20.2, 20.8, 21.3, 24.6,
35.9, 53.3, 58.8, 63.4, 67.5, 68.5, 68.9, 69.1, 71.5, 73.6, 74.9,
75.2, 75.5, 76.5, 86.7, 97.5, 127.7, 127.7, 127.8, 128.4, 128.5,
(
1→4)-2,3,6-tri-O-acetyl-β-D-glucopyranoside (10).
Com-
128.8, 130.1, 130.2, 132.6, 132.9, 133.3, 138.1, 153.4, 165.3,
168.5, 170.0, 170.5, 170.8, 171.8. LRMS (ESI) m/z: [M + Na]+
pound 10 was purified by silica flash chromatography using tol-
uene:acetone (1:1) as the eluent to provide 10 as a white solid
calcd for C45H49NO18SNa 946.3; Found 946.2.
1
(0.13 g, 0.12 mmol, 81% yield). H NMR (CDCl
3
, 600 MHz):
Phenyl (methyl 5-acetamido-7,8,9-tri-O-acetyl-5-N,4-O-car-
bonyl-3,5-dideoxy-D-glycero-α-D-galacto-non-2-ulopyra-
nosylonate)-(2→3)-2-O-benzoyl-4,6-O-benzylidene-1-thio-β-
D-galactopyranoside (13). Compound 13 was purified by silica
flash chromatography using hexanes:EtOAc (1:1) as the eluent
δ = 2.00 (1H, t, J = 12.8 Hz), 2.07 (3H, s), 2.09 (3H, s), 2.11
(3H, s), 2.11 (3H, s), 2.14 (9H, s), 2.23 (3H, s), 2.50 (3H, s),
2
(
.74 (4H, s), 2.97 (1H, dd, J = 3.2, 12.0 Hz), 3.47 (1H, br), 3.73
3H, m), 3.81 (3H, s), 3.89 (2H, m), 3.98 (1H, dd, J = 7.1, 12.3
Hz), 4.18 (1H, t, J = 9.3 Hz), 4.23 (1H, dd, J = 6.3, 11.9 Hz),
.27 (2H, d, J = 6.2 Hz), 4.36 (1H, dd, J = 3.0, 10.0 Hz), 4.42
1H, dd, J = 2.0, 11.8 Hz), 4.48 (1H, dd, J = 2.4, 12.2 Hz), 4.53
1H, dd, J = 1.7, 9.4 Hz), 4.64 (1H, d, J = 7.9 Hz), 5.05 (1H, dd,
to provide 13 as a white solid (0.96 g, 1.0 mmol, 87% yield).
4
(
(
1
3
H NMR (CDCl , 600 MHz): δ = 1.76 (1H, dd, J = 12.3, 13.5
Hz), 1.82 (3H, s), 2.05 (3H, s), 2.21 (3H, s), 2.46 (3H, s), 2.92
1H, dd, J = 3.2, 12.1 Hz), 3.48 (3H, s), 3.53 (1H, dd, J = 9.5,
1.2 Hz), 3.73 (1H, br), 3.75 (1H, m), 4.01 (1H, m), 4.12 (1H,
d, J = 3.2 Hz), 4.17 (1H, dd, J = 1.4, 12.0 Hz), 4.39 (1H, dd, J
(
1
J = 8.1, 9.9 Hz), 5.12 (1H, t, J = 6.6 Hz), 5.17 (1H, t, J = 7.2
13
1
Hz), 5.24 (1H, t, J = 8.1 Hz), 5.60 (2H, m). C{ H} NMR
(CDCl , 150 MHz): δ = 20.8, 20.8, 20.9, 20.9, 20.9, 21.0, 21.2,
3
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