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CAS No.: | 951-78-0 |
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Name: | 2'-Deoxyuridine |
Article Data: | 90 |
Cas Database | |
Molecular Structure: | |
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Formula: | C9H12N2O5 |
Molecular Weight: | 228.205 |
Synonyms: | 1-(2-Deoxy-b-D-erythro-pentofuranosyl)uracil;2,4(1H,3H)-Pyrimidinedione, 1-(2-deoxy-b-D-erythro-pentofuranosyl)-;2,4(1H,3H)-Pyrimidinedione,1-(2-deoxy-b-D-ribofuranosyl)-;2'-Desoxyuridine;Deoxyribose uracil;Deoxyuridine;NSC 23615;Uracildeoxyriboside;1-(2-Deoxy-b-D-ribofuranosyl)uracil;1-(2-Deoxy-D-erythro-pentofuranosyl)uracil;Uridine, 2'-deoxy-; |
EINECS: | 213-455-7 |
Density: | 1.533 g/cm3 |
Melting Point: | 167-169 °C(lit.) |
Boiling Point: | 370.01°C (rough estimate) |
Solubility: | 300 g/L at 20°C in water |
Appearance: | White crystalline powder |
Hazard Symbols: |
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Risk Codes: | 36/37/38 |
Safety: | 22-24/25-37/39 |
PSA: | 104.55000 |
LogP: | -1.82270 |
O5'-trityl-2'-deoxy-uridine
2'-deoxyuridine
Conditions | Yield |
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With silica gel; trifluoroacetic acid In methanol; chloroform | 100% |
Conditions | Yield |
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With cytidine deaminase enzyme In aq. phosphate buffer at 37℃; for 0.0833333h; pH=7; Enzymatic reaction; | 99% |
With acetic acid; sodium nitrite | |
With sodium hydroxide at 90.1℃; Rate constant; Mechanism; various reagent concentration, decomposition to nonchromophoric products; |
4-O-(2,4,6-Trimethylphenyl)-2'-deoxyuridine
A
2'-deoxyuridine
B
2'-Deoxycytidine
Conditions | Yield |
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With ammonium hydroxide at 65℃; for 2h; | A n/a B 98% |
Conditions | Yield |
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With triethylamine In methanol; water at 4℃; for 12h; Irradiation; sensitizer: methylene blue; | 96% |
Multi-step reaction with 3 steps 1: 99.7 percent / p-toluenesulfonic acid / tetrahydrofuran / 2 h / Ambient temperature 2: n-BuLi, MeI / tetrahydrofuran; hexane / -78 °C 3: 1N HCl / methanol / 0.08 h / Heating View Scheme | |
Multi-step reaction with 2 steps 1: (NH4)2SO4 / Heating 2: 1) PdCl3, Ph3P, 2) NH4Cl, H2O / 1) THF, reflux, 12 h, 2) MeOH, reflux, 3 h View Scheme | |
With sodium tetrahydroborate; Naphthalene-1,8-diselenol In aq. phosphate buffer at 37℃; pH=7; Reagent/catalyst; | |
With sodium tetrahydroborate; C10H8Te In aq. phosphate buffer at 37℃; pH=7; Kinetics; Reagent/catalyst; |
3',5'-O-di(tert-butyldimethylsilyl)-2'-deoxyuridine
2'-deoxyuridine
Conditions | Yield |
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With K 10 clay In methanol; water at 75℃; for 12h; | 94% |
3',5'-O-(tetraisopropyldisiloxane-1,3-diyl)-2'-deoxyuridine
2'-deoxyuridine
Conditions | Yield |
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With K 10 clay In methanol; water at 75℃; for 60h; | 90% |
With tetrabutyl ammonium fluoride Yield given; |
Conditions | Yield |
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With potassium dihydrogenphosphate; Escherichia coli thymidine phosphorylase; Escherichia coli purine nucleoside phosphorylase In aq. buffer at 20℃; for 20h; pH=7.5; Enzymatic reaction; | 80% |
dibutyl disulfide
C5-chloromercuri-2'-deoxyuridine
A
2'-deoxyuridine
B
5-(1-Thiapentyl)-2'-deoxyuridine
Conditions | Yield |
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With lithium tetrachloropalladate(II) In methanol for 16h; Ambient temperature; | A n/a B 73% |
With lithium tetrachloropalladate(II) In methanol for 16h; Ambient temperature; other organic disulfides; | A n/a B 73% |
3'-O-acetyl-5'-O-t-butyldimethylsilyl-2'-deoxyuridine
benzyl alcohol
A
(benzyloxy)(tert-butyl)dimethylsilane
B
2'-deoxyuridine
C
uracil
D
3'-O-acetyl-2'-deoxyuridine
Conditions | Yield |
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With copper(II) sulfate In xylene for 2h; Heating; | A n/a B n/a C n/a D 72% |
Conditions | Yield |
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Multistep reaction; | 60% |
Multi-step reaction with 4 steps 1: 90 percent / pyridine / 2 h / Ambient temperature 2: 4-(dimethylamino)pyridine / acetonitrile / 6 h / Ambient temperature 3: tri-n-butylstannane, α,α'-azoisobutyronitrile / toluene / 3 h / 75 °C 4: tetra-n-butylammonium fluoride View Scheme | |
Multi-step reaction with 3 steps 1: sodium hydroxide; bis(phenyl) carbonate / N,N-dimethyl-formamide / 12 h / 140 °C 2: hydrogenchloride / N,N-dimethyl-formamide / 14 h / 40 °C 3: sodium hydroxide; nickel; hydrogen / methanol / 20 h / 40 °C View Scheme |
The 2'-Deoxyuridine, with the CAS registry number 951-78-0 and EINECS registry number 213-455-7, has the IUPAC name of 1-[(2R,4S,5R)-4-hydroxy-5-(hydroxymethyl)oxolan-2-yl]pyrimidine-2,4-dione. It is a kind of white crystalline powder which is also air sensitive. The molecular formula of the chemical is C9H12N2O5. What's more, while dealing with this chemical, you should not breathe dust and then try to avoid contacting with skin and eyes.
The physical properties of 2'-Deoxyuridine are as followings: (1)ACD/LogP: -1.70; (2)# of Rule of 5 Violations: 0; (3)ACD/LogD (pH 5.5): -1.7; (4)ACD/LogD (pH 7.4): -1.74; (5)ACD/BCF (pH 5.5): 1; (6)ACD/BCF (pH 7.4): 1; (7)ACD/KOC (pH 5.5): 2.82; (8)ACD/KOC (pH 7.4): 2.58; (9)#H bond acceptors: 7; (10)#H bond donors: 3; (11)#Freely Rotating Bonds: 4; (12)Polar Surface Area: 68.31 Å2; (13)Index of Refraction: 1.603; (14)Molar Refractivity: 51.14 cm3; (15)Molar Volume: 148.8 cm3; (16)Polarizability: 20.27×10-24cm3; (17)Surface Tension: 71.1 dyne/cm; (18)Density: 1.533 g/cm3.
Uses of 2'-Deoxyuridine: It is always used as an uridine derivative as therapeutic agent for treating allergy, cancer, infection and autoimmune disease. And it is also used as intermediates.
You should be cautious while dealing with this chemical. It irritates to eyes, respiratory system and skin. Therefore, you had better take the following instructions: Do not breathe dust and avoid contacting with skin and eyes; Wear suitable gloves and eye/face protection, and in case of contacting with eyes, rinse immediately with plenty of water and seek medical advice.
You can still convert the following datas into molecular structure:
(1)SMILES: O=C/1NC(=O)N(\C=C\1)C2O[C@@H]([C@@H](O)C2)CO
(2)InChI: InChI=1/C9H12N2O5/c12-4-6-5(13)3-8(16-6)11-2-1-7(14)10-9(11)15/h1-2,5-6,8,12-13H,3-4H2,(H,10,14,15)/t5-,6+,8?/m0/s1
(3)InChIKey: MXHRCPNRJAMMIM-FWHJPCMOBR