N. Miyamoto et al. / Bioorg. Med. Chem. 21 (2013) 2333–2345
2345
10. Yuan, A.; Yu, C. J.; Chen, W. J.; Lin, F. Y.; Kuo, S. H.; Luh, K. T.; Yang, P. C. Int. J.
Cancer 2000, 89, 475.
5.9. Xenograft model antitumor assay
11. Jacobsen, J.; Grankvist, K.; Rasmuson, T.; Bergh, A.; Landberg, G.; Ljungberg, B.
Br. J. Urol. Int. 2004, 93, 297.
12. Ferrara, N.; Hillan, K. J.; Gerber, H. P.; Novotny, W. Nat. Rev. Drug Disc. 2004, 3,
391.
Human lung carcinoma cell line A549 (ATCC No. CCL-185) was
obtained from American Type Culture Collection (Manassas, USA).
The cells were proliferated in DMEM (Invitrogen, Carlsbad, USA)
supplemented with 10% heat-inactivated fetal bovine serum (Hy-
Clone, Logan, USA) and antibiotics (100 units/mL penicillin G and
13. Strumberg, D. Drugs Today 2005, 41, 773.
14. Motzer, R. J.; Michaelson, M. D.; Redman, B. G.; Hudes, G. R.; Wilding, G.; Figlin,
R. A.; Ginsberg, M. S.; Kim, S. T.; Baum, C. M.; DePrimo, S. E.; Li, J. Z.; Bello, C. L.;
Theuer, C. P.; George, D. J.; Rini, B. I. J. Clin. Oncol. 2006, 24, 16.
15. Harris, P. A.; Boloor, A.; Cheung, M.; Kumar, R.; Crosby, R. M.; Davis-Ward, R.
G.; Epperly, A. H.; Hinkle, K. W.; Hunter, R. N., III; Johnson, J. H.; Knick, V. B.;
Laudeman, C. P.; Luttrell, D. K.; Mook, R. A.; Nolte, R. T.; Rudolph, S. K.;
Szewczyk, J. R.; Truesdale, A. T.; Veal, J. M.; Wang, L.; Stafford, J. A. J. Med. Chem.
2008, 51, 4632.
16. Rini, B. I.; Escudier, B.; Tomczak, P.; Kaprin, A.; Szczylik, C.; Hutson, T. E.;
Michaelson, M. D.; Gorbunova, V. A.; Gore, M. E.; Rusakov, I. G.; Negrier, S.; Ou,
Y. C.; Castellano, D.; Lim, H. Y.; Uemura, H.; Tarazi, J.; Cella, D.; Chen, C.;
Rosbrook, B.; Kim, S.; Motzer, R. J. Lancet 2011, 378, 1931.
100 lg/mL streptomycin, Wako Pure Chemical, Japan). The cells
were cultured in tissue culture dishes in a humidified incubator
at 37 °C in an atmosphere of 5% CO2 and 95% air. Compound was
suspended in 0.5 w/v% methylcellulose (Shin-Etsu Chemical, Ja-
pan) vehicle solution. Six-week old female athymic nude mice
(BALB/cAJcl-nu/nu, CLEA Japan, Japan) received subcutaneous
injections into the hind flank with 5 Â 106 A549 cells in 100
lL
of Hanks’ balanced salt solution (Invitrogen). When tumors
reached a volume of 100–150 mm3, mice were randomized into
four groups (n = 5). Then, mice were orally given vehicle or com-
pound (0.25, 1, and 4 mg/kg) twice-daily for 2 weeks. Tumor vol-
umes were assessed by bilateral vernier caliper measurement
17. (a) Roth, G. J.; Heckel, A.; Colbatzky, F.; Handschuh, S.; Kley, J.; Lehmann-Lintz,
T.; Lotz, R.; Tontsch-Grunt, U.; Walter, R.; Hilberg, F. J. Med. Chem. 2009, 52,
4466; (b) Renhowe, P. A.; Pecchi, S.; Shafer, C. M.; Machajewski, T. D.; Jazan, E.
M.; Taylor, C.; Antonios-McCrea, W.; McBride, C. M.; Frazier, K.; Wiesmann, M.;
Lapointe, G. R.; Feucht, P. H.; Warne, R. L.; Heise, C. C.; Menezes, D.; Aardalen,
K.; Ye, H.; He, M.; Le, V.; Vora, J.; Jansen, J. M.; Wernette-Hammond, M. E.;
Harris, A. L. J. Med. Chem. 2009, 52, 278; (c) Polverino, A.; Coxon, A.; Starnes, C.;
Diaz, Z.; DeMelfi, T.; Wang, L.; Bready, J.; Estrada, J.; Cattley, R.; Kaufman, S.;
Chen, D.; Gan, Y.; Kumar, G.; Meyer, J.; Neervannan, S.; Alva, G.; Talvenheimo,
J.; Montestruque, S.; Tasker, A.; Patel, V.; Radinsky, R.; Kendall, R. Cancer Res.
2006, 66, 8715; (d) Nakamura, K.; Taguchi, E.; Miura, T.; Yamamoto, A.;
Takahashi, K.; Bichat, F.; Guilbaud, N.; Hasegawa, K.; Kubo, K.; Fujiwara, Y.;
Suzuki, R.; Kubo, K.; Shibuya, M.; Isae, T. Cancer Res. 2006, 66, 9134; (e) Dai, Y.;
Hartandi, K.; Ji, Z.; Ahmed, A. A.; Albert, D. H.; Bauch, J. L.; Bouska, J. J.;
Bousquet, P. F.; Cunha, G. A.; Glaser, K. B.; Harris, C. M.; Hickman, D.; Guo, J.; Li,
J.; Marcotte, P. A.; Marsh, K. C.; Moskey, M. D.; Martin, R. L.; Olson, A. M.;
Osterling, D. J.; Pease, L. J.; Soni, N. B.; Stewart, K. D.; Stoll, V. S.; Tapang, P.;
Reuter, D. R.; Davidsen, S. K.; Michaelides, M. R. J. Med. Chem. 2007, 50, 1584; (f)
Bold, G.; Altmann, K. H.; Frei, J.; Lang, M.; Manley, P. W.; Traxler, P.; Wietfeld,
B.; Brüggen, J.; Buchdunger, E.; Cozens, R.; Ferrari, S.; Furet, P.; Hofmann, F.;
Martiny-Baron, G.; Mestan, J.; Rösel, J.; Sills, M.; Stover, D.; Acemoglu, F.; Boss,
E.; Emmenegger, R.; Lässer, L.; Masso, E.; Roth, R.; Schlachter, C.; Vetterli, W.;
Wyss, D.; Wood, J. M. J. Med. Chem. 2000, 43, 2310; (g) Gingrich, D. E.; Reddy, D.
R.; Iqbal, M. A.; Singh, J.; Aimone, L. D.; Angeles, T. S.; Albom, M.; Yang, S.; Ator,
M. A.; Meyer, S. L.; Robinson, C.; Ruggeri, B. A.; Dionne, C. A.; Vaught, J. L.;
Mallamo, J. P.; Hudkins, R. L. J. Med. Chem. 2003, 46, 5375; (h) Cai, Z. W.; Zhang,
Y.; Borzilleri, R. M.; Qian, L.; Barbosa, S.; Wei, D.; Zheng, X.; Wu, L.; Fan, J.; Shi,
Z.; Wautlet, B. S.; Mortillo, S.; Jeyaseelan, R., Sr.; Kukral, D. W.; Kamath, A.;
Marathe, P.; D’Arienzo, C.; Derbin, G.; Barrish, J. C.; Robl, J. A.; Hunt, J. T.;
Lombardo, L. J.; Fargnoli, J.; Bhide, R. S. J. Med. Chem. 2008, 51, 1976.
18. (a) Abramsson, A.; Lindblom, P.; Betsholtz, C. J. Clin. Invest. 2003, 112, 1142; (b)
Lindahl, P.; Johansson, B. R.; Léveen, P.; Betsholtz, C. Science 1997, 277, 242.
19. Bergers, G.; Song, S.; Meyer-Morse, N.; Bergsland, E.; Hanahan, D. J. Clin. Invest.
2003, 111, 1287.
twice-weekly after inoculation and calculated as volume
=
length  width2  1/2, where length was taken to be the longest
diameter across the tumor and width the corresponding perpen-
dicular. Treatment over control (T/C, %), an index of antitumor effi-
cacy, was calculated by comparison of the mean change in tumor
volume over the treatment period for the control and treated
groups. Body weight was also measured on the day of tumor vol-
ume assessment. Effects of compound on tumor growth and body
weight were statistically analyzed by a one-tailed Williams’ test or
Shirley–Williams’ test. Differences were considered significant at
p 60.025.
Acknowledgments
The authors would like to thank Ms. T. Yoshida for kinase assay;
Dr. A. Mizutani, Mr. Y. Nagase, and Dr. K. Nakamura for pharmaco-
logical in vitro and in vivo assays; Dr. K. Iwamoto and Ms. A. Hirok-
awa for protein production for X-ray crystallography; Ms. Y.
Watanabe for PK evaluation; Dr. K. Kamiyama and Dr. T. Kitazaki
for helpful discussion and supports; and all TAK-593 project team
members for their valuable contributions.
20. Pietras, K.; Sjöblom, T.; Rubin, K.; Heldin, C. H.; Ostman, A. Cancer Cell 2003, 3,
439.
21. Miyamoto, N.; Oguro, Y.; Takagi, T.; Iwata, H.; Miki, H.; Hori, A.; Imamura, S.
Bioorg. Med. Chem. 2012, 20, 7051.
Supplementary data
Supplementary data associated with this article can be found, in
These data include MOL files and InChiKeys of the most important
compounds described in this article.
22. The fragment library screening was performed by an enzyme inhibition assay
using VEGFR2 kinase domain, which was used in X-ray crystallography.
Compound 3 was identified as one of the hit fragments with an IC50 value of
34 lM.
23. Ullman, E. F.; Kirakossian, H.; Singh, S.; Wu, Z. P.; Irvin, B. R.; Pease, J. S.;
Switchenko, A. C.; Irvine, J. D.; Dafforn, A.; Skold, C. N.; Wagner, D. B. Proc. Natl.
Acad. Sci. U.S.A. 1994, 91, 5426.
References and notes
24. Liu, Y.; Gray, N. S. Nat. Chem. Biol. 2006, 2, 358.
25. Iwata, H.; Imamura, S.; Hori, A.; Hixon, M. S.; Kimura, H.; Miki, H. Biochemistry
2011, 50, 738.
26. Lipinski, C. A.; Lombardo, F.; Dominy, B. W.; Feeney, P. J. Adv. Drug Delivery Rev.
2001, 46, 3.
1. (a) Folkman, J. N. Engl. J. Med. 1971, 285, 1182; (b) Folkman, J.; Shing, Y. J. Biol.
Chem. 1992, 267, 10931.
2. Shibuya, M.; Claesson-Welsh, L. Exp. Cell Res. 2006, 312, 549.
3. (a) Dougher, M.; Terman, B. I. Oncogene 1999, 18, 1619; (b) Hubbard, S. R. Prog.
Biophys. Mol. Biol. 1999, 71, 343; (c) Strawn, L. M.; Shawver, L. K. Expert Opin.
Investig Drugs 1998, 7, 553.
4. Yoshiji, H.; Kuriyama, S.; Hicklin, D. J.; Huber, J.; Yoshii, J.; Miyamoto, Y.;
Kawata, M.; Ikenaka, Y.; Nakatani, T.; Tsujinoue, H.; Fukui, H. Hepatology 1999,
30, 1179.
5. Crew, J. P.; O’Brien, T.; Bradburn, M.; Fuggle, S.; Bicknell, R.; Cranston, D.;
Harris, A. L. Cancer Res. 1997, 57, 5281.
6. Balbay, M. D.; Pettaway, C. A.; Kuniyasu, H.; Inoue, K.; Ramirez, E.; Li, E.; Fidler,
I. J.; Dinney, C. P. N. Clin. Cancer Res. 1999, 5, 783.
7. Samoto, K.; Ikezaki, K.; Ono, M.; Shono, T.; Kohno, K.; Kuwano, M.; Fukui, M.
Cancer Res. 1995, 55, 1189.
8. Takahashi, A.; Sasaki, H.; Kim, S. J.; Tobisu, K.; Kakizoe, T.; Tsukamoto, T.;
Kumamoto, Y.; Sugimura, T.; Terada, M. Cancer Res. 1994, 54, 4233.
9. Guetz, G. D.; Uzzan, B.; Nicolas, P.; Cucherat, M.; Morere, J. F.; Benamouzig, R.;
Breau, J. L.; Perret, G. Y. Br. J. Cancer 2006, 94, 1823.
27. Ishikawa, M.; Hashimoto, Y. J. Med. Chem. 2011, 54, 1539.
28. Awazu, Y.; Mizutani, A.; Nagase, Y.; Tsuchiya, S.; Nakamura, K.; Kakoi, Y.;
Kitahara, O.; Takeuchi, T.; Yamasaki, S.; Miyamoto, N.; Iwata, H.; Miki, H.;
29. Tummino, P. J.; Copeland, R. A. Biochemistry 2008, 47, 5481.
30. Maes, B. U. W.; Lemière, G. L. F.; Dommisse, R.; Augustyns, K.; Haemers, A.
Tetrahedron 2000, 56, 1777.
31. Oguro, Y.; Miyamoto, N.; Okada, K.; Takagi, T.; Iwata, H.; Awazu, Y.; Miki, H.;
Hori, A.; Kamiyama, K.; Imamura, S. Bioorg. Med. Chem. 2010, 18, 7260.
32. Otwinowski, Z.; Minor, W. Methods Enzymol. 1997, 276, 307.
33. Vagin, A.; Teplyakov, A. J. Appl. Crystallogr. 1997, 30, 1022.
34. Collaborative Computational Project, Number 4. The CCP4 suite: programs for
protein crystallography. Acta Crystallogr., Sect. D: Biol Crystallogr. 1994, 50, 760.
35. Emsley, P.; Lohkamp, B.; Scott, W. G.; Cowtan, K. Acta Crystallogr., Sect. D: Biol.
Crystallogr. 2010, 66, 486.