Gymnoascolides A-C from Gymnoascus reessii
Journal of Natural Products, 2005, Vol. 68, No. 8 1229
eter, while infrared (IR) spectra were acquired using a Shi-
madzu FTIR-8400 spectrometer.
(0.01% TFA) over 20 min, through a 5 µm Phenomenex LUNA
C18(2) 150 × 21.2 mm column) to yield gymnoascolide A (1) (9.1
mg, 1.8%).
In addition, for the oxidation products (+)-4 and (-)-4,
optical rotations were obtained using a Jasco P-1010 intelligent
remote module-type polarimeter, and circular dichroism (CD)
spectra were acquired using a JASCO J-810 spectropolarim-
Subsequently, a more polar fraction (44 mg) that appeared
to contain similar metabolites was fractionated using C18 SPE
(as for the previous fraction), followed by C8 HPLC (10
injections, 2.5 mL/min gradient elution from 60% H2O/MeCN
(0.01% TFA) to 20% H2O/MeCN (0.01% TFA) over 20 min,
through a 5 µm Phenomenex LUNA C8(2) 10 × 250 mm column)
then phenyl-hexyl HPLC (20 injections, 1 mL/min isocratic
elution with 50% H2O/MeCN, through a 5 µm Phenomenex
phenyl-hexyl 4.6 × 150 mm column), yielding gymnoascolide
B (2) (2.2 mg, 0.43%) and gymnoascolide C (3) (1.5 mg, 0.29%).
All percent yields for purified metabolites were calculated
against the combined residue (0.5 g) recovered after elution
of the extract from two parallel C18 SPE preparative cartridges.
Gymnoascolide A (1): colorless oil; IR (CHCl3) νmax 3064-
3011, 2928, 1759, 1495, 1467, 1126, 1045, 957 cm-1; UV
(EtOH) λmax (ꢀ) 248 (10500) nm; 1H NMR data (CDCl3, 400
MHz) see Table 1; 13C NMR data (CDCl3, 100 MHz) see Table
2; ESI(+)MS (30 kV) m/z 523 [2M + Na]+, 273 [M + Na]+, 251
[M + H]+; HRESI(+)MS m/z 273.0880 ([M + Na]+, C17H14O2-
Na requires 273.0891).
Gymnoascolide B (2): white solid; [R]D -105° (c 0.044,
CHCl3); IR (CHCl3) νmax 3543, 2930, 1774, 1495, 1448, 1369,
1331, 1234, 1109 cm-1; UV (EtOH) λmax (ꢀ) 259 (4900) nm; 1H
NMR data (CDCl3, 400 MHz) see Table 1; 13C NMR data
(CDCl3, 100 MHz) see Table 2; ESI(+)MS (30 kV) m/z 319 [M
+ Na]+; HRESI(+)MS m/z 319.0942 ([M + Na]+, C18H16O4Na
requires 319.0946).
Gymnoascolide C (3): white solid; [R]D -110° (c 0.022,
CHCl3); IR (CHCl3) νmax 3570, 2928, 2855, 1767, 1494, 1446,
1371, 1334, 1117 cm-1; UV (EtOH) λmax (ꢀ) 255 (5500) nm; 1H
NMR data (CDCl3, 400 MHz) see Table 1; 13C NMR data
(CDCl3, 100 MHz) see Table 2; ESI(+)MS (30 kV) m/z 319 [M
+ Na]+; HRESI(+)MS m/z 319.0941 ([M + Na]+, C18H16O4Na
requires 319.0946).
1
eter. H NMR spectra were acquired using a Bruker Avance
600 spectrometer, and ESI(()MS data were obtained using a
Agilent 1100 Series Separations module equipped with a
Agilent 1100 Series LC/MSD mass detector. High-resolution
(HR) ESI-MS measurements were obtained on a Finnigan
MAT 900 XL-Trap instrument with a Finnigan API III source.
Computational Methods. All calculations were carried out
with Linux AMD MP 2400+ workstations. The conformational
analysis was performed by means of the semiempirical PM37
method as implemented in the program package, Gaussian
98,19 starting from preoptimized geometries generated by the
TRIPOS11 force field as part of the molecular modeling
package, SYBYL 7.0.11 The molecular dynamics simulations
of 4 were run at a virtual temperature of 500 K using the
TRIPOS11 force field with a time step of 2 fs. Bond lengths
were constrained using the SHAKE algorithm.20 The overall
simulation time was 500 ps, and every 0.5 ps a single geometry
was extracted.
The wave functions required for the computation of the
rotational strengths for the electronic transitions from the
ground state to excited states were obtained by CNDO/S8
calculations followed by single configuration interaction (SCI)
computations, including 784 singly occupied configurations and
the ground state determinant. These computations were
carried out using the BDZDO/MCDSPD21 program package.
The single CD spectra were summed up and weighted follow-
ing the Boltzmann statistics, that is, according to the respec-
tive heats of formation. The rotational strengths were trans-
formed into ∆ꢀ values and, for a better visualization, super-
imposed with a Gaussian band shape function.
Biological Material. The fungal strain MST-F9977 was
isolated from a roadside soil sample collected near Sussex Inlet
on the southern coast of New South Wales, Australia, in an
area regenerating from a recent bushfire. The isolate was
identified as an ascomycete, Gymnoascus reessii, on morpho-
logical grounds. On malt extract agar, it is characterized by
orange hyphae and a pinkish reverse.
Assay Details. Procedures for antibacterial,22 cytotoxicity,22
and nematocidal23 assays have been described previously.
Antifungal activity was determined in an agar-based, micro-
titer plate bioassay. Spores of Candida albicans or Septoria
nodorum (20 000 sp/well) were applied to potato dextrose agar
in the wells of a microtiter plate, containing serial 2-fold
dilutions of the test compound. The plates were incubated at
24 °C before a qualitative assessment of fungal growth was
made at 48 h, with the LD99 determined as the lowest
concentration of the test compound at which no growth of the
fungus was observed.
Oxidation of Gymnoascolide B (2). A sample of 2 (1.1
mg) in CH2Cl2 (2 mL) was treated with pyridinium dichromate
(2.2 mg) and the suspension stirred overnight, after which the
mixture was filtered through a small plug of silica to remove
chromium salts and washed well with ether. The combined
washings were concentrated in vacuo to yield (+)-4 (0.9 mg,
82%) as a colorless oil: [R]D +175° (c 0.018, CHCl3); UV (EtOH)
λmax (ꢀ) 256 (6700) nm, 293 (sh) (3400); CD (MeOH) λmax (ꢀ)
1
233 (-41000), 307 (18500) nm; H NMR (CDCl3, 600 MHz) δ
7.78 (2H, m), 7.50 (1H, m), 7.45 (2H, m), 7.33 (2H, m), 7.28
(1H, m), 7.23 (2H, m), 6.20 (1H, s), 3.64 (3H, s); ESI(+)MS
m/z 317 [M + Na]+; HRESI(+)MS m/z 317.0793 ([M + Na]+,
C18H14O4Na requires 317.0790).
Oxidation of Gymnoascolide C (3). A sample of 3 (0.7
mg) was oxidized in the same manner as described above,
yielding (-)-4 (0.7 mg, 100%) as a colorless oil: [R]D -160° (c
0.014, CHCl3); UV (EtOH) λmax (ꢀ) 254 (6200) nm; 293 (sh)
(3000); CD (MeOH) λmax (ꢀ) 233 (34000), 307 (-15000) nm; 1H
NMR (CDCl3, 600 MHz) δ 7.78 (2H, m), 7.50 (1H, m), 7.45 (2H,
m), 7.33 (2H, m), 7.28 (1H, m), 7.23 (2H, m), 6.20 (1H, s), 3.64
(3H, s); ESI(+)MS m/z 317 [M + Na]+; HRESI(+)MS m/z
317.0784 ([M + Na]+, C18H14O4Na requires 317.0790).
Extraction and Isolation. A solid fermentation (100 g
wheat, 21 days, 28 °C) was extracted with MeOH. This extract
was concentrated in vacuo to an aqueous residue that was
diluted with H2O to a final volume of 1 L. This was passed
through two parallel C18 solid-phase extraction (SPE) car-
tridges (2 × 10 g, Varian HF C18), eluting with MeOH (2 × 40
mL each). On evaporation of the combined MeOH eluants, a
residue (∼0.5 g) was obtained that was subjected to prepara-
tive HPLC (60 mL/min with gradient elution of 70 to 10% H2O/
MeCN over 20 min followed by MeCN for 10 min, through a 5
µm Platinum EPS C18 50 × 100 mm column). One hundred
fractions were collected, concentrated in vacuo, and combined
on the basis of analytical HPLC analysis.
Acknowledgment. The authors would like to thank S.
Duck and G. MacFarlane for acquisition of HRESIMS data,
D. Howse for assistance in data management, and A. Hocking
for taxonomic classification. This research was partially funded
by the Australian Research Council and by the Fonds der
Chemischen Industrie.
One of these combined fractions (38 mg) possessed interest-
ing aromatic 1H NMR resonances and was further fractionated
by C18 SPE (10% stepwise gradient elution from 60% H2O/
MeOH to MeOH, through a 500 mg Alltech Extract-Clean C18
cartridge) and C18 HPLC (3 injections, 10 mL/min gradient
elution from 70% H2O/MeCN (0.01% TFA) to 30% H2O/MeCN
References and Notes
(1) Kitano, K.; Kintaka, K.; Katamoto, K.; Nara, K.; Nakao, Y. J. Ferment.
Technol. (Hakko Kogaku Zasshi) 1975, 53, 339-346.
(2) Kitano, K.; Kintaka, K.; Suzuki, S.; Katamoto, K.; Nara, K.; Nakao,
Y. J. Ferment. Technol. (Hakko Kogaku Zasshi) 1975, 53, 327-338.
(3) Karow, E. O.; Foster, J. W. Science 1944, 99, 265-266.