LETTER
DNA Strands Damaged by N2-Arylamine Adducts
1069
(2 equiv) were suspended in dry DME and stirred at 80 °C.
After the reaction was completed, sat. NaHCO3 and NaCl
solution were added. The layers were separated and the
aqueous layer was extracted three times with EtOAc. The
combined organic layers were dried over Na2SO4 and the
solvent was removed in vacuo. The product was isolated by
column chromatography using PE–EtOAc (10% → 35%).
(24) Compound 7a: The general procedure was conducted with
3.05 g of 5 (4.40 mmol) and 1 mL of 6a (8.8 mmol); yield
2.52 g (3.52 mmol, 80%) of 7a as a slightly brown solid. 1H
NMR (400 MHz, DMSO-d6): d = 8.46 (s, 2 H, H-8), 7.43–
6.82 (m, 9 H, HAr), 6.67 (dd, 3JH,H = 7.3 Hz, 3JH,H = 7.2 Hz,
1 H, H-1¢), 5.34 (s, 2 H, NH), 4.42–4.19 (m, 2 H, H-a), 3.72–
3.71 (m, 3 H, H4¢, H5¢a, H5¢b), 3.06 (t, 3JH,H = 6.9 Hz,
3JH,H = 6.9 Hz, 2 H, Hb), 2.97–2.91 (m, 1 H, H2¢a), 1.91 (s,
1 H, H2¢b), 0.75 [s, 9 H, Si(CH3)3 at C3¢], 0.80 [s, 9 H,
Si(CH3)3 at C5¢], 0.00 [s, 6 H, Si(CH3)2], –0.15 [2 × s, 2 × 3
H, Si(CH3)2] ppm. 13C NMR (101 MHz, DMSO-d6): d =
159.1 (C-6), 156.7 (C-2), 152.4 (C-D), 145.7 (C-A), 144.4
(C-f), 139.6 (C-8), 130.0 (C-C), 129.5 (C-c), 127.6 (C-d),
127.5 (C-e), 123.6 (C-4), 119.0 (C-B), 118.6 (CN), 114.8 (C-
5), 87.1 (C-4¢), 84.0 (C-1¢ 71.6 (C-3¢), 67.8 (C-a), 62.8 (C-
5¢), 39.7 (C-2¢), 34.7 [2 × SiC(CH3)3], 34.3 (C-b) ppm. Mp
84–87 °C; [a]54620 –3 (c 1.0, CHCl3). IR (KBr): 3744, 3037,
1737, 1695, 1612, 1507, 1110, 838 cm–1. HRMS–FAB: m/z
calcd: 715.3698; found: 716.3736 [M + H+].
oligonucleotides containing the lesions concerning their
Tm value and their conformation (CD spectra). Our ap-
proach allows now further biochemical studies with re-
gard to the impact of the lesions on replication and repair.
These studies are currently under way in our laboratories.
Acknowledgment
This work was supported by the Deutsche Forschungsgemeinschaft
(DFG) and the University of Hamburg.
References and Notes
(1) (a) Wagenknecht, H.-A. Angew. Chem. Int. Ed. 2006, 45,
5583; Angew. Chem. 2006, 118, 5709. (b) Carell, T.;
Burgdorf, L. T.; Kundu, L. M.; Cichon, M. Curr. Opin.
Chem. Biol. 2001, 5, 491. (c) Friedberg, E. C.; Walker, G.
C.; Siede, W. DNA Repair and Mutagenesis; American
Society for Microbiology Press: Washington, DC, 1995.
(d) Schärer, O. D. Angew. Chem. Int. Ed. 2003, 42, 2946;
Angew. Chem. 2003, 115, 3052.
(2) Garner, R. C. Mutat. Res. 1998, 402, 67.
(3) Neumann, H. G. Cancer Res. Clin. Oncol. 1986, 112, 100.
(4) Beland, F. A.; Kadlubar, F. F. Environ. Health Perspect.
1985, 62, 19.
Compound 7b: The general procedure was conducted with
2.36 g of 5 (3.42 mmol) and 1.42 g of 6b (7.60 mmol); yield
1.35 g (1.71 mmol, 50%) of 7b as a yellow solid. 1H NMR
(400 MHz, DMSO-d6): d = 8.19 (s, 1 H, H8), 7.77–7.33 (m,
13 H, Har), 6.31 (dd, 3JH,H = 6.7 Hz, 1 H, H1¢), 5.37, 5.20
(2 × s, 2 × 1 H, NH), 4.70 (t, 3JH,H = 6.9 Hz, 2 H, Ha), 4.54–
4.51 (m, 2 H, H3¢), 3.85–3.82 (m, 1 H, H4¢), 3.72–3.62 (m,
2 H, H5¢a, H5¢b), 3.17 (t, 3JH,H = 6.9 Hz, 2 H, Hb), 2.97–2.90
(m, 1 H, H2¢a), 2.30–2.24 (m, 1 H, H2¢b), 0.88, 0.84 [2 × s,
2 × 9 H, Si(CH3)3], 0.10, 0.00 [2 × s, 2 × 6 H, Si(CH3)2] ppm.
13C NMR (101 MHz, DMSO-d6): d = 159.2 (C6), 157.5,
153.1 (C4), 148.2 (C2), 144.1, 139.7 (C8), 132.0, 128.7,
126.1, 118.7 (CN), 115.1 (C5), 87.1 (C4¢), 83.2 (C1¢), 72.3
(C3¢), 65.8 (Ca), 62.8 (C5¢ 38.3 (C2¢), 34.1 (Cb), 25.6, 25.5
[2 × SiC(CH3)3], –5.6, –5.1 [2 × Si(CH3)2] ppm. Mp 75–
78 °C; [a]54620 +25 (c 0.4, CHCl3). IR (KBr): 2954, 2928,
2857, 1687, 1109, 776, 740, 482 cm–1. MS (HRFAB): m/z
calcd: 791.4011; found: 791.4035 [M + H]+.
(5) (a) Famulok, M.; Boche, G. Angew. Chem., Int. Ed. Engl.
1989, 28, 468; Angew. Chem. 1989, 101, 470. (b) Famulok,
M.; Bosold, F.; Boche, G. Tetrahedron Lett. 1989, 30, 321.
(6) Famulok, M.; Bosold, F.; Boche, G. Angew. Chem., Int. Ed.
Engl. 1989, 28, 337; Angew. Chem. 1989, 101, 349.
(7) Swaminathan, S.; Hatcher, J. F. Chem.-Biol. Interact. 2002,
139, 199.
(8) Swaminathan, S.; Hatcher, J. F. Environ. Mol. Mutagen.
2002, 39, 314.
(9) Kadlubar, F. F. Princess Takamatsu Symp. 21 1990, 329.
(10) Meier, C.; Boche, G. Carcinogenesis 1991, 12, 1633.
(11) Meier, C.; Boche, G. Tetrahedron Lett. 1990, 31, 1693.
(12) Elmquist, C. E.; Stover, J. S.; Wang, Z.; Rizzo, C. J. J. Am.
Chem. Soc. 2004, 126, 11189.
(13) Böge, N.; Gräsl, S.; Meier, C. J. Org. Chem. 2006, 71, 9728.
(14) Böge, N.; Szombati, Z.; Meier, C. Nucleosides, Nucleotides
Nucleic Acids 2007, 26, 705.
(15) (a) Takamura-Enya, T.; Ishikawa, S.; Mochizuki, M.;
Wakabayashi, K. Tetrahedron Lett. 2003, 44, 5969.
(b) Takamura-Enya, T.; Ishikawa, S.; Mochizuki, M.;
Wakabayashi, K. Chem. Res. Toxicol. 2006, 19, 770.
(16) (a) Gillet, L. C. J.; Schärer, O. D. Org. Lett. 2002, 24, 4205.
(b) Gillet, L. C. J.; Alzeer, J.; Schärer, O. D. Nucleic Acids
Res. 2005, 33, 1961.
(25) Compound 10a: 1H NMR (400 MHz, benzene-d6): d = 7.84
[s, 1 H, H-8 (I)], 7.81 [s, 1 H, H-8 (II)], 7.71–7.41 [m, 44 H,
HAr (I + II), DMTr-H (I + II)], 6.25 [dd, 3JH,H = 6.4 Hz,
3JH,H = 6.3 Hz, 2 H, H-1¢ (I + II)], 4.74–4.58 [m, 2 H, NH
(I)], 4.47–4.37 [m, 2 H, NH (II)], 4.16–4.05 [m, 4 H, H-a (I
+ II)], 3.58–3.35 (m, 12 H, OCH3, H-5¢a/b (I + II), H-b(I)]
3.15–3.02 [m, 2 H, H-b (II)], 2.54–2.29 (m, 12 H, i-PrH (I +
II), H-a (I + II), H-2¢a/b (I + II)], 1.81 [t, 2 H, H-b (I)], 1.73
[m, 2 H, H-b (II)], 1.15–1.01 [m, 24 H, CH3i-Pr (I + II)] ppm.
13C NMR (101 MHz, benzene-d6): d = 160.1, 159.3, 158.7,
148.2, 145.8, 143.3, 138.0, 137.4, 136.1, 132.0, 131.4,
130.6, 130.1, 129.8, 119.0, 113.7, 113.0, 111.0, 87.1, 74.4,
(17) De Riccardis, F.; Bonala, R. R.; Johnson, F. J. Am. Chem.
Soc. 1999, 121, 10453.
(18) Stover, J. S.; Chowdhury, G.; Zang, H.; Guengerich, F. P.;
Rizzo, C. J. Chem. Res. Toxicol. 2006, 19, 1506.
(19) Haack, T.; Boche, G.; Kliem, C.; Wiessler, M.; Albert, D.;
Schmeiser, H. H. Chem. Res. Toxicol. 2004, 17, 776.
(20) Uhlmann, E.; Pfleiderer, W. Helv. Chim. Acta 1981, 64,
1688.
74.2, 66.0, 54.8, 45.3, 43.6, 35,1, 24.7, 24.6, 22.8 ppm. 31
P
NMR (162 MHz, benzene-d6): d = 149.35, 149.19 ppm. Mp
68–71 °C. [a]54620 +183 (c 1.0, CHCl3). IR KBr): 3870,
3816, 3752, 3744, 3676, 3447, 2966, 1654, 1609, 1581,
1508, 1465, 1383, 1250, 1179, 1034, 829 cm–1. MS–FAB:
m/z calcd: 989.4353; found: 990.5 [M + H]+.
(21) Zeghough, D.; Samsoniya, S.; Suvorov, N. N. Chem.
Heterocycl. Compd. 1990, 3, 343.
(22) Amatore, C.; Azzabi, M.; Jutland, A. J. J. Am. Chem. Soc.
1991, 113, 8375.
Compound 11a: 1H NMR (400 MHz, benzene-d6): d = 7.88
[s, 1 H, H-8 (I)], 7.85 [s, 1 H, H-8 (II)], 7.62–6.58 [m, 49 H,
DMTr-H (I + II), HAr (I + II)], 6.27–6.18 [m, 2 H, H-1¢ (I +
II)], 5.07–4.95 [m, 2 H, H-3¢ (I + II)], 4.73–4.67 [m, 4 H, H-
a (I + II)], 4.13–4.06 [m, 2 H, H-4¢ (I + II)], 3.54–3.26 [m, 20
(23) General Procedure for the Synthesis of the N2-
Arylhydrazino Adducts (7a,b)
Under nitrogen atmosphere 5 (1 equiv), racemic BINAP (30
mol%), Pd2dba3 (10 mol%), K3PO4 (2 equiv),
triethylammonium chloride (0.1 equiv), and arylhydrazine
Synlett 2008, No. 7, 1066–1070 © Thieme Stuttgart · New York