Full Papers
doi.org/10.1002/open.202000324
ChemistryOpen
Deprotection: The resin was shaken in 5 mL of 20% piperidine-DMF
solution for 15 min at room temperature and then washed with
DMF three times.
2-Carbonyl-3-(2-Nitrophenyl)-Ethyl Heptanoate (4)
1.8 g (10.0 mmol) 3’ was dissolved in 50 mL of anhydrous
acetonitrile; 11.6 g (85.0 mmol) of anhydrous potassium carbonate
and 15 mg of 18-crown-6 were added to the solution. Ethyl
bromobutyrate in 5.0 mL of acetonitrile was dropped into the
solution slowly and then refluxed. The reaction was monitored
completely by TLC (for about 16 h). When the reaction was
complete, the solvent was evaporated to dryness, and citric acid
water was added and extracted with ethyl acetate (50 mL×3). The
combined organic phase was washed with saturated sodium
chloride solution and dried with the anhydrous sodium sulfate.
Product 4 was purified by flash chromatography (petroleum ether:
ethyl acetate=10/1) 2.45 g (83.6%) yellow oil Rf=0.3 (petroleum
ether/ethyl acetate=10/1) 1H NMR (400 MHz, DMSO) δ 7.97 (dd, J=
8.16, 1.12 Hz, 1 H), 7.73 (td, J=7.56, 1.4 Hz, 1 H), 7.56 (td, J=8.12,
1.4 Hz, 1 H), 7.47 (dd, J=7.6, 1.12 Hz, 1 H), 4.13 (dd, J=9.0, 5.6 Hz, 1
H),4.01 (dd, J=14.32, 7.0 Hz, 2 H), 2.27 (td, J=7.56, 2.52 Hz, 2 H),
2.09 (s, 3H), 2.07–1.99 (m, 1 H), 1.73–1.64 (m, 1 H), 1.46–1.39 (m, 1
H), 1.31–1.28 (m, 1 H), 1.15 (t, J=18.76 Hz, 3 H). 13C NMR (100 MHz,
DMSO) δ 206.35, 172.98, 150.18, 133.86, 132.94, 130.81, 129.01,
124.94, 60.19, 53.52, 40.61, 40.40, 40.19, 39.98, 39.77, 39.56, 39.36,
33.60, 30.26, 29.28, 22.92, 14.54. HRMS (ESI): m/z calcd. for
C15H19NO5 +Na+: 316.13 [M+Na]+, found 316.1153.
Loading with other amino acids: The resin was shaken in the DMF
solution containing Fmoc-AA-OH (0.5 mmol), HCTU (0.5 mmol) and
NMM (0.5 mmol) for 2 h at room temperature. The reaction was
°
monitored by ninhydrin at 100 C for 5 min.
Fully Protected CP-9and Deprotected CP-9from 10
10 (0.1 g) was dissolved into THF (5 mL) and exposed to a 365 nm
ultraviolet lamp for 5, 10, 15, or 20 min; 400 μL of the irradiated
solution was removed and detected by HPLC. The liquid phase was
90% acetonitrile-water solution. After purification, the fully pro-
tected CP-9 was obtained (photolysis rate was 74.6%) and
identified by mass spectrometry. TOF-MS: m/z calculated for
2058.0311[M+Na]+ found 2058.8354.
10 (0.2 g) was added to 20% piperidine-DMF (6 mL) to remove
Fmoc protection and allow cleavage (1.8 mL trifluoroacetic acid,
0.1 mL water and 0.1 mL triisopropylsilane) to remove other
protective groups. The resin after treatment was put into 5 mL THF
and exposed to a 365 nm ultraviolet lamp for 5, 10, 15, 20, or
25 min; 400 μL of the irradiated solution was removed and studied
by HPLC at each time point. The liquid phase was 3% acetonitrile-
water solution. After purification, the deprotected CP-9 was
obtained (photolysis rate was 67.0%) and identified by mass
spectrometry. TOF-MS: m/z calculated for 1005.4411[M+H]+, found
1005.4479.
2-Hydroxy-3-(2-Nitrophenyl)-Heptanoic acid (Nph): Here, 4 was
dissolved in 50 mL of methanol, and 0.38 g of sodium borohydride
were added slowly in an ice bath and stirred. The reaction was
monitored and completed after 30 min, as shown by TLC. The
reaction solution was evaporated to dryness to obtain the crude
product of 5 (2.53 g).
Supporting Information: Further detailed experimental procedures
5 was dissolved in the mixed solvent (5:1) of EtOH and water with
0.4 g NaOH. It was stirred at room temperature for 12 h. The
reaction was monitored completely by TLC. The solvent was then
evaporated when the reaction was complete. The crude product
was washed with hydrochloric acid solution to pH 1 and extracted
with DCM. Drying collected the organic layer over Na2SO4, followed
by concentration. The product Nph was purified by flash
chromatography (dichloromethane/ methanol=25/1) as light yel-
low solid; 1.91 g (85.6%) light yellow solid Rf=0.6 (dichloro-
methane/ methanol=20/1) 1H NMR (400 MHz, DMSO) δ 11.95
(s,1H), 7.68 (dd, J=7.84, 0.84 Hz, 1H), 7.63-7.55 (m, 2 H), 7.38 (td, J=
7.0, 1.68 Hz, 1 H), 4.64 (d, J=3.08 Hz, 1 H), 3.73 (d, J=1.68 Hz, 1 H),
2.87 (dd, J=13.72, 7.0 Hz, 1 H), 2.13 (dd, J=13.16, 6.72 Hz, 2 H),
1.69 (dd, J=15.68, 7.84 Hz, 2H), 1.39-1.28 (m, 1 H), 1.25-1.16 (m, 1
H), 0.89 (d, J=6.44 Hz, 3 H). 13C NMR (100 MHz, DMSO) δ 174.15,
152.53, 136.21, 132.29, 130.02, 127.47, 123.33, 69.21, 46.09, 34.07,
31.22, 23.01, 22.05. HRMS (ESI): m/z calcd. for C13H17NO5-H,
266.11[MÀ H]À , found 266.1034.
1
and copies of H and 13C NMR spectra as well as other chromato-
grams disseminated are available as supporting information.
Acknowledgements
The authors are grateful to the National Natural Science
Foundation of China (Grant No. 81273431, 21102176 and
21272273) for its financial support for this project.
Conflict of Interest
The authors declare no conflict of interest.
The resin loading of fully protected CP-9 (10): The linker (Nph) was
placed on the amino resin: 0.1 mmol (0.217 g) of amino resin in
DCM for swelling for 20 min with Nph (0.5 mmol), HCTU (0.5 mmol),
and NMM (0.5 mmol). These were dissolved in 6 ml DMF and
shaken at room temperature for 2 h. The reaction was monitored
Keywords: linker molecules · peptides · protecting groups ·
photolabile compounds · solid-phase synthesis
°
by ninhydrin at 100 C for 5 min. Loading the first amino acid:
[3] T. W. Greene, P. G. M. Wuts, Wiley&Sons, GREENE’S PROTECTIVE GROUPS
IN ORGANIC SYNTHESIS. New York, 2006.
[4] a) C. Ma, Y. Zhang, H. Zhang, J. Li, Y. Nishiyama, H. Tanimoto, T.
Morimoto, K. Kakiuchi, Synlett. 2016: s-0036–1588915; b) M. Lu, O. D.
Fedoryak, B. R. Moister, T. M. Dore, Org. Lett. 2003, 12, 2119–2122.
[5] A. Colombo, D. L. F. Natalia, J. C. Fernàndez, D. Fernández-Forner, F.
Albericio, P. Forns, Org. Lett. 2007, 21, 4319–4322.
Fmoc-Lys-OH (0.5 mmol) and DMAP (0.0122 g, 0.10 mmol) were
dissolved in 5 mL DCM (0.5 mL DMF for solubilization). Diisopro-
pylcarbodiimide (0.06 g, 0.5 mmol) was slowly dropped into the
reaction solution. The solution was shaken at room temperature for
6 h and then fed again.
Sealing: The resin was shaken in 5 mL (1 mL acetic anhydride, 1 mL
pyridine, 3 mL DMF) and mixed for 1 h after washing with DMF
three times at room temperature.
[7] M. M. Mahmoodi, D. Abate-Pella, T. J. Pundsack, C. C. Palsuledesai, P. C
ChemistryOpen 2021, 10, 497–502
501
© 2021 The Authors. Published by Wiley-VCH GmbH